Jacek Kominek

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 14

Top Topics

Escherichia Coli

Saccharomyces Cerevisiae

Quality Control

Genetic Diversity

Top Venues

Nature communications

Science (New York, N.Y.)

G3 (Bethesda, Md.)

Science advances

This page only lists publications with an associated author ORCID identifier.

Publications

Dana A Opulente, Abigail Leavitt LaBella, Marie-Claire Harrison, John F Wolters, Chao Liu, Yonglin Li, Jacek Kominek, Jacob Lucas Steenwyk, Hayley R Stoneman, Jenna VanDenAvond, Caroline R Miller, Quinn K Langdon, Margarida Silva, Carla Gonçalves, Emily J Ubbelohde, Yuanning Li, Kelly V Buh, Martin Jarzyna, Max A B Haase, Carlos A Rosa, Neža Čadež, Diego Libkind, Jeremy H DeVirgilio, Amanda Beth Hulfachor, Cletus P Kurtzman, José Paulo Sampaio, Paula Gonçalves, Xiao-Fan Zhou, Xing-Xing Shen, Marizeth Groenewald, Antonis Rokas, Chris Todd Hittinger
Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts. Science (New York, N.Y.) 384 (6694) (2024)
Dana A Opulente, Abigail Leavitt LaBella, Marie-Claire Harrison, John F Wolters, Chao Liu, Yonglin Li, Jacek Kominek, Jacob Lucas Steenwyk, Hayley R Stoneman, Jenna VanDenAvond, Caroline R Miller, Quinn K Langdon, Margarida Silva, Carla Gonçalves, Emily J Ubbelohde, Yuanning Li, Kelly V Buh, Martin Jarzyna, Max A B Haase, Carlos A Rosa, Neža Čadež, Diego Libkind, Jeremy H DeVirgilio, Amanda Beth Hulfachor, Cletus P Kurtzman, José Paulo Sampaio, Paula Gonçalves, Xiao-Fan Zhou, Xing-Xing Shen, Marizeth Groenewald, Antonis Rokas, Chris Todd Hittinger
Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts. Science (New York, N.Y.) 384 (6694) (2024)
Dana A Opulente, Abigail Leavitt LaBella, Marie-Claire Harrison, John F Wolters, Chao Liu, Yonglin Li, Jacek Kominek, Jacob Lucas Steenwyk, Hayley R Stoneman, Jenna VanDenAvond, Caroline R Miller, Quinn K Langdon, Margarida Silva, Carla Gonçalves, Emily J Ubbelohde, Yuanning Li, Kelly V Buh, Martin Jarzyna, Max A B Haase, Carlos A Rosa, Neža Čadež, Diego Libkind, Jeremy H DeVirgilio, Amanda Beth Hulfachor, Cletus P Kurtzman, José Paulo Sampaio, Paula Gonçalves, Xiao-Fan Zhou, Xing-Xing Shen, Marizeth Groenewald, Antonis Rokas, Chris Todd Hittinger
Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts. Science (New York, N.Y.) 384 (6694) (2024)
Dana A Opulente, Abigail Leavitt LaBella, Marie-Claire Harrison, John F Wolters, Chao Liu, Yonglin Li, Jacek Kominek, Jacob Lucas Steenwyk, Hayley R Stoneman, Jenna VanDenAvond, Caroline R Miller, Quinn K Langdon, Margarida Silva, Carla Gonçalves, Emily J Ubbelohde, Yuanning Li, Kelly V Buh, Martin Jarzyna, Max A B Haase, Carlos A Rosa, Neža Čadež, Diego Libkind, Jeremy H DeVirgilio, Amanda Beth Hulfachor, Cletus P Kurtzman, José Paulo Sampaio, Paula Gonçalves, Xiao-Fan Zhou, Xing-Xing Shen, Marizeth Groenewald, Antonis Rokas, Chris Todd Hittinger
Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts. Science (New York, N.Y.) 384 (6694) (2024)
David Peris, Emily J Ubbelohde, Meihua Christina Kuang, Jacek Kominek, Quinn K Langdon, Marie Adams, Justin A Koshalek, Amanda Beth Hulfachor, Dana A Opulente, David J Hall, Katie Hyma, Justin C Fay, Jean-Baptiste Leducq, Guillaume Charron, Christian R Landry, Diego Libkind, Carla Gonçalves, Paula Gonçalves, José Paulo Sampaio, Qi-Ming Wang, Feng-Yan Bai, Russell L Wrobel, Chris Todd Hittinger
Macroevolutionary diversity of traits and genomes in the model yeast genus Saccharomyces. Nature communications 14 (1) (2023)
David Peris, Emily J Ubbelohde, Meihua Christina Kuang, Jacek Kominek, Quinn K Langdon, Marie Adams, Justin A Koshalek, Amanda Beth Hulfachor, Dana A Opulente, David J Hall, Katie Hyma, Justin C Fay, Jean-Baptiste Leducq, Guillaume Charron, Christian R Landry, Diego Libkind, Carla Gonçalves, Paula Gonçalves, José Paulo Sampaio, Qi-Ming Wang, Feng-Yan Bai, Russell L Wrobel, Chris Todd Hittinger
Macroevolutionary diversity of traits and genomes in the model yeast genus Saccharomyces. Nature communications 14 (1) (2023)
David Peris, Emily J Ubbelohde, Meihua Christina Kuang, Jacek Kominek, Quinn K Langdon, Marie Adams, Justin A Koshalek, Amanda Beth Hulfachor, Dana A Opulente, David J Hall, Katie Hyma, Justin C Fay, Jean-Baptiste Leducq, Guillaume Charron, Christian R Landry, Diego Libkind, Carla Gonçalves, Paula Gonçalves, José Paulo Sampaio, Qi-Ming Wang, Feng-Yan Bai, Russell L Wrobel, Chris Todd Hittinger
Macroevolutionary diversity of traits and genomes in the model yeast genus Saccharomyces. Nature communications 14 (1) (2023)
David Peris, Emily J Ubbelohde, Meihua Christina Kuang, Jacek Kominek, Quinn K Langdon, Marie Adams, Justin A Koshalek, Amanda Beth Hulfachor, Dana A Opulente, David J Hall, Katie Hyma, Justin C Fay, Jean-Baptiste Leducq, Guillaume Charron, Christian R Landry, Diego Libkind, Carla Gonçalves, Paula Gonçalves, José Paulo Sampaio, Qi-Ming Wang, Feng-Yan Bai, Russell L Wrobel, Chris Todd Hittinger
Macroevolutionary diversity of traits and genomes in the model yeast genus Saccharomyces. Nature communications 14 (1) (2023)
David Peris, Emily J Ubbelohde, Meihua Christina Kuang, Jacek Kominek, Quinn K Langdon, Marie Adams, Justin A Koshalek, Amanda Beth Hulfachor, Dana A Opulente, David J Hall, Katie Hyma, Justin C Fay, Jean-Baptiste Leducq, Guillaume Charron, Christian R Landry, Diego Libkind, Carla Gonçalves, Paula Gonçalves, José Paulo Sampaio, Qi-Ming Wang, Feng-Yan Bai, Russell L Wrobel, Chris Todd Hittinger
Macroevolutionary diversity of traits and genomes in the model yeast genus Saccharomyces. Nature communications 14 (1) (2023)
Xing-Xing Shen, Jacob Lucas Steenwyk, Abigail Leavitt LaBella, Dana A Opulente, Xiaofan Zhou, Jacek Kominek, Yuanning Li, Marizeth Groenewald, Chris Todd Hittinger, Antonis Rokas
Genome-scale phylogeny and contrasting modes of genome evolution in the fungal phylum Ascomycota. Science advances 6 (45) (2020)
Karin Voordeckers, Camilla Colding, Lavinia Grasso, Benjamin Pardo, Lore Hoes, Jacek Kominek, Kim Gielens, Kaat Dekoster, Jonathan Gordon, Elisa Van der Zande, Peter Bircham, Toon Swings, Jan Michiels, Peter Van Loo, Sandra Nuyts, Philippe Pasero, Michael Lisby, Kevin J Verstrepen
Ethanol exposure increases mutation rate through error-prone polymerases. Nature communications 11 (1) (2020)
Tadeusz Krassowski, Aisling Y Coughlan, Xing-Xing Shen, Xiaofan Zhou, Jacek Kominek, Dana A Opulente, Robert Riley, Igor V Grigoriev, Nikunj Maheshwari, Denis C Shields, Cletus P Kurtzman, Chris Todd Hittinger, Antonis Rokas, Kenneth H Wolfe
Evolutionary instability of CUG-Leu in the genetic code of budding yeasts. Nature communications 9 (1) (2018)
Xing-Xing Shen, Xiao-Fan Zhou, Jacek Kominek, Cletus P Kurtzman, Chris Todd Hittinger, Antonis Rokas
Reconstructing the Backbone of the Saccharomycotina Yeast Phylogeny Using Genome-Scale Data. G3 (Bethesda, Md.) 6 (12) (2016)
Xiao-Fan Zhou, David Peris, Jacek Kominek, Cletus P Kurtzman, Chris Todd Hittinger, Antonis Rokas
In Silico Whole Genome Sequencer and Analyzer (iWGS): a Computational Pipeline to Guide the Design and Analysis of de novo Genome Sequencing Studies. G3 (Bethesda, Md.) 6 (11) (2016)