Osler A Ortez (James Schnable, James C Schnable)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 55

Top Venues

The Plant journal : for cell and molecular biology

Nature communications

The Plant cell

Plant direct

University of Nebraska-Lincoln

University of California Berkeley (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Nebraska-Lincoln Aug 19 2019

United States

Associate Professor

University of Nebraska-Lincoln May 01 2014 - Aug 18 2019

United States

Assistant Professor

Education History

University of California Berkeley

United States

PHD :: Plant and Microbial Biology

Publications

J Vladimir Torres-Rodríguez, De-Lin Li, Jonathan Turkus, Linsey Newton, Jensina Davis, Lina Lopez-Corona, Waqar Ali, Guangchao Sun, Ravi V Mural, Marcin W Grzybowski, Bradley M Zamft, Addie M Thompson, Osler A Ortez
Population-level gene expression can repeatedly link genes to functions in maize. The Plant journal : for cell and molecular biology 119 (2) (2024)
J Vladimir Torres-Rodríguez, De-Lin Li, Jonathan Turkus, Linsey Newton, Jensina Davis, Lina Lopez-Corona, Waqar Ali, Guangchao Sun, Ravi V Mural, Marcin W Grzybowski, Bradley M Zamft, Addie M Thompson, Osler A Ortez
Population-level gene expression can repeatedly link genes to functions in maize. The Plant journal : for cell and molecular biology (2024)
Meetu Gupta, Nikee Shrestha, Henrique Moura Dias, Ravi V Mural, Marcin W Grzybowski, Osler A Ortez, Katarzyna Głowacka
Nonphotochemical quenching kinetics GWAS in sorghum identifies genes that may play conserved roles in maize and Arabidopsis thaliana photoprotection. The Plant journal : for cell and molecular biology (2024)
Sunil K Kenchanmane Raju, Yang Zhang, Samira Mahboub, Daniel W Ngu, Yumou Qiu, Frank G Harmon, Osler A Ortez, Rebecca L Roston
Rhythmic lipid and gene expression responses to chilling in panicoid grasses. Journal of experimental botany (2024)
Marcin W Grzybowski, Ravi V Mural, Gen Xu, Jonathan Turkus, Jinliang Yang, Osler A Ortez
A Common Resequencing-Based Genetic Marker Dataset for Global Maize Diversity. The Plant journal : for cell and molecular biology (2023)
Daniel R Kick, Mitchell Tuinstra, Osler A Ortez, Judith M Kolkman, Barış Alaca, Timothy M Beissinger, Jode W Edwards, Maria Cinta Romay, Sherry A Flint-Garcia, Joseph L Gage, Candice N Hirsch, Joseph E Knoll, Natalia de Leon, Dayane Cristina Lima, Danilo E Moreta, Rajandeep S Sekhon, Addie M Thompson, Teclemariam Weldekidan, Jacob D Washburn
Yield Prediction Through Integration of Genetic, Environment, and Management Data Through Deep Learning. G3 (Bethesda, Md.) (2023)
Marcin W Grzybowski, Ravi V Mural, Gen Xu, Jonathan Turkus, Jinliang Yang, Osler A Ortez
A Common Resequencing-Based Genetic Marker Dataset for Global Maize Diversity. The Plant journal : for cell and molecular biology (2023)
Marcin W Grzybowski, Ravi V Mural, Gen Xu, Jonathan Turkus, Jinliang Yang, Osler A Ortez
A common resequencing-based genetic marker data set for global maize diversity. The Plant journal : for cell and molecular biology 113 (6) (2023)
Jian Chen, Zijian Wang, Kaiwen Tan, Wei Huang, Junpeng Shi, Tong Li, Jiang Hu, Kai Wang, Chao Wang, Beibei Xin, Haiming Zhao, Weibin Song, Matthew B Hufford, Osler A Ortez, Weiwei Jin, Jinsheng Lai
A complete telomere-to-telomere assembly of the maize genome. Nature genetics (2023)
Guangchao Sun, Huihui Yu, Peng Wang, Martha Lopez-Guerrero, Ravi V Mural, Olivier N Mizero, Marcin Grzybowski, Baoxing Song, Karin van Dijk, Daniel P Schachtman, Chi Zhang, Osler A Ortez
A role for heritable transcriptomic variation in maize adaptation to temperate environments. Genome biology 24 (1) (2023)
Allison C Barnes, Jennifer L Myers, Samantha M Surber, Zhikai Liang, Jeffrey P Mower, Osler A Ortez, Rebecca L Roston
Oligogalactolipid production during cold challenge is conserved in early diverging lineages. Journal of experimental botany (2023)
Marcin W Grzybowski, Ravi V Mural, Gen Xu, Jonathan Turkus, Jinliang Yang, Osler A Ortez
A common resequencing-based genetic marker data set for global maize diversity. The Plant journal : for cell and molecular biology 113 (6) (2023)
Dayane Cristina Lima, Alejandro Castro Aviles, Ryan Timothy Alpers, Alden C Perkins, Dylan L Schoemaker, Martin Costa, Kathryn J Michel, Shawn M Kaeppler, Maria Cinta Romay, Maria Cinta Romay, Joseph L Gage, James B Holland, Timothy M Beissinger, Martin O Bohn, Edward S Buckler, Jode W Edwards, Sherry A Flint-Garcia, Michael A Gore, Candice N Hirsch, Joseph E Knoll, John K McKay, Richard Minyo, Richard Minyo, Osler A Ortez, Rajandeep S Sekhon, Rajandeep S Sekhon, Maninder P Singh, Peter Thomison, Addie M Thompson, Mitchell R Tuinstra, Mitchell Tuinstra, Jacob D Washburn, Teclemariam Weldekidan, Wenwei Xu, Natalia de Leon
2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative. BMC research notes 16 (1) (2023)
Dayane Cristina Lima, Jacob D Washburn, José Ignacio Varela, Qiuyue Chen, Joseph L Gage, Maria Cinta Romay, James B Holland, Maria Cinta Romay, Marco Lopez-Cruz, Fernando M Aguate, Gustavo de Los Campos, Shawn M Kaeppler, Timothy M Beissinger, Martin O Bohn, Edward S Buckler, Jode W Edwards, Sherry A Flint-Garcia, Michael A Gore, Candice N Hirsch, Joseph E Knoll, John K McKay, Richard Minyo, Seth C Murray, Osler A Ortez, Rajandeep S Sekhon, Rajandeep S Sekhon, Maninder P Singh, Addie M Thompson, Mitchell R Tuinstra, Mitchell Tuinstra, Teclemariam Weldekidan, Teclemariam Weldekidan, Natalia de Leon, Natalia de Leon
Genomes to Fields 2022 Maize genotype by Environment Prediction Competition. BMC research notes 16 (1) (2023)
Marcin W Grzybowski, Ravi V Mural, Gen Xu, Jonathan Turkus, Jinliang Yang, Osler A Ortez
A common resequencing-based genetic marker data set for global maize diversity. The Plant journal : for cell and molecular biology (2023)
Dayane Cristina Lima, Alejandro Castro Aviles, Ryan Timothy Alpers, Bridget A McFarland, Shawn M Kaeppler, Maria Cinta Romay, Maria Cinta Romay, Joseph L Gage, James B Holland, Timothy Beissinger, Martin Bohn, Edward Buckler, Jode W Edwards, Sherry A Flint-Garcia, Candice N Hirsch, Elizabeth E Hood, David C Hooker, Joseph E Knoll, Judith M Kolkman, Sanzhen Liu, John K McKay, Richard Minyo, Danilo E Moreta, Richard Minyo, Rebecca Nelson, Osler A Ortez, Rajandeep S Sekhon, Rajandeep S Sekhon, Peter Thomison, Addie M Thompson, Mitchell R Tuinstra, Mitchell Tuinstra, Jacob D Washburn, Teclemariam Weldekidan, Randall J Wisser, Wenwei Xu, Natalia de Leon
2018-2019 field seasons of the Maize Genomes to Fields (G2F) G x E project. BMC genomic data 24 (1) (2023)
Nuwan K Wijewardane, Huichun Zhang, Jinliang Yang, Osler A Ortez, Daniel P Schachtman, Yufeng Ge
A leaf-level spectral library to support high throughput plant phenotyping: Predictive accuracy and model transfer. Journal of experimental botany (2023)
Marcin W Grzybowski, Ravi V Mural, Gen Xu, Jonathan Turkus, Jinliang Yang, Osler A Ortez
A common resequencing-based genetic marker data set for global maize diversity. The Plant journal : for cell and molecular biology 113 (6) (2023)
Meetu Gupta, Marcin W Grzybowski, Osler A Ortez, Katarzyna Głowacka
Genetic control of photoprotection and photosystem II operating efficiency in plants. The New phytologist (2023)
Ravi V Mural, Marcin W Grzybowski, Chenyong Miao, Alyssa Damke, Sirjan Sapkota, Richard E Boyles, Maria G Salas Fernandez, Patrick S Schnable, Brandi Sigmon, Stephen Kresovich, Osler A Ortez
Meta-analysis identifies pleiotropic loci controlling phenotypic trade-offs in sorghum. Genetics 218 (3) (2022)
Huihui Yu, Mu Li, Jaspreet Sandhu, Guangchao Sun, Osler A Ortez, Harkamal Walia, Weibo Xie, Bin Yu, Jeffrey P Mower, Chi Zhang
Pervasive misannotation of microexons that are evolutionarily conserved and crucial for gene function in plants. Nature communications 13 (1) (2022)
Guangchao Sun, Nishikant Wase, Shengqiang Shu, Jerry W Jenkins, Bangjun Zhou, J Vladimir Torres-Rodríguez, Cindy Chen, Laura Sandor, Christopher Plott, Yuko Yoshinga, Christopher Daum, Peng Qi, Kerrie Barry, Anna Lipzen, Luke Berry, Connor Pedersen, Thomas Gottilla, Ashley Foltz, Huihui Yu, Ronan C O'Malley, Chi Zhang, Katrien M Devos, Brandi Sigmon, Bin Yu, Toshihiro Obata, Jeremy Schmutz, Osler A Ortez
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass. Nature communications 13 (1) (2022)
Guangchao Sun, Nishikant Wase, Shengqiang Shu, Jerry W Jenkins, Bangjun Zhou, J Vladimir Torres-Rodríguez, Cindy Chen, Laura Sandor, Christopher Plott, Yuko Yoshinga, Christopher Daum, Peng Qi, Kerrie Barry, Anna Lipzen, Luke Berry, Connor Pedersen, Thomas Gottilla, Ashley Foltz, Huihui Yu, Ronan C O'Malley, Chi Zhang, Katrien M Devos, Brandi Sigmon, Bin Yu, Toshihiro Obata, Jeremy Schmutz, Osler A Ortez
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass. Nature communications 13 (1) (2022)
Qinnan Yang, Mallory Van Haute, Nate Korth, Scott E Sattler, John Toy, Devin J Rose, Osler A Ortez, Andrew K Benson
Author Correction: Genetic analysis of seed traits in Sorghum bicolor that affect the human gut microbiome. Nature communications 13 (1) (2022)
Ravi V Mural, Guangchao Sun, Marcin W Grzybowski, Michael C Tross, Hongyu Jin, Christine Smith, Linsey Newton, Carson M Andorf, Margaret R Woodhouse, Addie M Thompson, Brandi Sigmon, Osler A Ortez
Association mapping across a multitude of traits collected in diverse environments in maize. GigaScience 11 (2022)
Guangchao Sun, Nishikant Wase, Shengqiang Shu, Jerry W Jenkins, Bangjun Zhou, J Vladimir Torres-Rodríguez, Cindy Chen, Laura Sandor, Christopher Plott, Yuko Yoshinga, Christopher Daum, Peng Qi, Kerrie Barry, Anna Lipzen, Luke Berry, Connor Pedersen, Thomas Gottilla, Ashley Foltz, Huihui Yu, Ronan C O'Malley, Chi Zhang, Katrien M Devos, Brandi Sigmon, Bin Yu, Toshihiro Obata, Jeremy Schmutz, Osler A Ortez
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass. Nature communications 13 (1) (2022)
Qinnan Yang, Mallory Van Haute, Nate Korth, Scott E Sattler, John Toy, Devin J Rose, Osler A Ortez, Andrew K Benson
Genetic analysis of seed traits in Sorghum bicolor that affect the human gut microbiome. Nature communications 13 (1) (2022)
Guangchao Sun, Nishikant Wase, Shengqiang Shu, Jerry W Jenkins, Bangjun Zhou, J Vladimir Torres-Rodríguez, Cindy Chen, Laura Sandor, Christopher Plott, Yuko Yoshinga, Christopher Daum, Peng Qi, Kerrie Barry, Anna Lipzen, Luke Berry, Connor Pedersen, Thomas Gottilla, Ashley Foltz, Huihui Yu, Ronan C O'Malley, Chi Zhang, Katrien M Devos, Brandi Sigmon, Bin Yu, Toshihiro Obata, Jeremy Schmutz, Osler A Ortez
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass. Nature communications 13 (1) (2022)
Rituraj Khound, Guangchao Sun, Ravi V Mural, Osler A Ortez, Dipak K Santra
SNP discovery in proso millet ( Panicum miliaceum L.) using low-pass genome sequencing. Plant direct 6 (9) (2022)
J Lucas Boatwright, Sirjan Sapkota, Hongyu Jin, Osler A Ortez, Zachary Brenton, Richard Boyles, Stephen Kresovich
Sorghum Association Panel whole-genome sequencing establishes cornerstone resource for dissecting genomic diversity. The Plant journal : for cell and molecular biology 111 (3) (2022)
De-Lin Li, Dong Bai, Yu Tian, Ying-Hui Li, Chaoseng Zhao, Qi Wang, Shiyu Guo, Yongzhe Gu, Xiaoyan Luan, Ruizhen Wang, Jinliang Yang, Malcolm John Hawkesford, Osler A Ortez, Xiuliang Jin, Li-Juan Qiu
Time Series Canopy Phenotyping Enables the Identification of Genetic Variants Controlling Dynamic Phenotypes in Soybean. Journal of integrative plant biology (2022)
Yan Zhou, Aaron Kusmec, Seyed Vahid Mirnezami, Lakshmi Attigala, Srikant Srinivasan, Talukder Zaki Jubery, Osler A Ortez, Maria G Salas-Fernandez, Baskar Ganapathysubramanian, Patrick S Schnable
Identification and utilization of genetic determinants of trait measurement errors in image-based, high-throughput phenotyping. The Plant cell 33 (8) (2021)
Lucas Busta, Elizabeth Schmitz, Dylan K Kosma, Osler A Ortez, Edgar B Cahoon
A co-opted steroid synthesis gene, maintained in sorghum but not maize, is associated with a divergence in leaf wax chemistry. Proceedings of the National Academy of Sciences of the United States of America 118 (12) (2021)
J Preston Hurst, Osler A Ortez, David R Holding
Tandem duplicate expression patterns are conserved between maize haplotypes of the α-zein gene family. Plant direct 5 (9) (2021)
Robert J DiMario, Ashley N Kophs, Varsha S Pathare, Osler A Ortez, Asaph B Cousins
Kinetic variation in grass phosphoenolpyruvate carboxylases provides opportunity to enhance C4 photosynthetic efficiency. The Plant journal : for cell and molecular biology 105 (6) (2021)
Xiaoxi Meng, Zhikai Liang, Xiuru Dai, Yang Zhang, Samira Mahboub, Daniel W Ngu, Rebecca L Roston, Osler A Ortez
Predicting transcriptional responses to cold stress across plant species. Proceedings of the National Academy of Sciences of the United States of America 118 (10) (2021)
Mathieu Gaillard, Chenyong Miao, Osler A Ortez, Bedrich Benes
Voxel carving-based 3D reconstruction of sorghum identifies genetic determinants of light interception efficiency. Plant direct 4 (10) (2020)
Ronghao Wang, Yumou Qiu, Yuzhen Zhou, Zhikai Liang, Osler A Ortez
A High-Throughput Phenotyping Pipeline for Image Processing and Functional Growth Curve Analysis. Plant phenomics (Washington, D.C.) 2020 (2020)
Bin Peng, Kaiyu Guan, Jinyun Tang, Elizabeth A Ainsworth, Senthold Asseng, Carl J Bernacchi, Mark Cooper, Evan H Delucia, Joshua W Elliott, Frank Ewert, Robert F Grant, David I Gustafson, Graeme L Hammer, Zhenong Jin, James W Jones, Hyungsuk Kimm, David M Lawrence, Yan Li, Danica L Lombardozzi, Amy Marshall-Colon, Carlos D Messina, Donald R Ort, Osler A Ortez, C Eduardo Vallejos, Alex C Wu, Xinyou Yin, Wang Zhou
Towards a multiscale crop modelling framework for climate change adaptation assessment. Nature plants 6 (4) (2020)
Chenyong Miao, Yuhang Xu, Sanzhen Liu, Patrick S Schnable, Osler A Ortez
Increased Power and Accuracy of Causal Locus Identification in Time Series Genome-wide Association in Sorghum. Plant physiology 183 (4) (2020)
Jinlei Han, Pengxi Wang, Qiongli Wang, Qingfang Lin, Zhiyong Chen, Guangrun Yu, Chenyong Miao, Yihang Dao, Ruoxi Wu, Osler A Ortez, Haibao Tang, Kai Wang
Genome-Wide Characterization of DNase I-Hypersensitive Sites and Cold Response Regulatory Landscapes in Grasses. The Plant cell 32 (8) (2020)
Sunil K Kenchanmane Raju, Miles Adkins, Alex Enersen, Daniel Santana de Carvalho, Anthony J Studer, Baskar Ganapathysubramanian, Patrick S Schnable, Osler A Ortez
Leaf Angle eXtractor: A high-throughput image processing framework for leaf angle measurements in maize and sorghum. Applications in plant sciences 8 (8) (2020)
Xiuru Dai, Zheng Xu, Zhikai Liang, Xiaoyu Tu, Silin Zhong, Osler A Ortez, Pinghua Li
Non-homology-based prediction of gene functions in maize (Zea mays ssp. mays). The plant genome 13 (2) (2020)
Chenyong Miao, Alejandro Pages, Zheng Xu, Eric Rodene, Jinliang Yang, Osler A Ortez
Semantic Segmentation of Sorghum Using Hyperspectral Data Identifies Genetic Associations. Plant phenomics (Washington, D.C.) 2020 (2020)
Chang-Song Zou, Leiting Li, Daisuke Miki, Delin Li, Qiming Tang, Lihong Xiao, Santosh Rajput, Ping Deng, Li Peng, Wei Jia, Ru Huang, Meiling Zhang, Yidan Sun, Jiamin Hu, Xing Fu, Patrick S Schnable, Yuxiao Chang, Feng Li, Hui Zhang, Baili Feng, Xinguang Zhu, Renyi Liu, Osler A Ortez, Jian-Kang Zhu, Heng Zhang
The genome of broomcorn millet. Nature communications 10 (1) (2019)
Ying-Hui Li, Delin Li, Yong-Qing Jiao, Osler A Ortez, Yan-Fei Li, Hui-Hui Li, Huai-Zhu Chen, Hui-Long Hong, Ting Zhang, Bin Liu, Zhang-Xiong Liu, Qing-Bo You, Yu Tian, Yong Guo, Rong-Xia Guan, Li-Juan Zhang, Ru-Zhen Chang, Zhiwu Zhang, Jochen Reif, Xin-An Zhou, Patrick S Schnable, Li-Juan Qiu
Identification of loci controlling adaptation in Chinese soya bean landraces via a combination of conventional and bioclimatic GWAS. Plant biotechnology journal 18 (2) (2019)
Peng Qi, Douglas Eudy, Osler A Ortez, Jeremy Schmutz, Paul L Raymer, Katrien M Devos
High Density Genetic Maps of Seashore Paspalum Using Genotyping-By-Sequencing and Their Relationship to The Sorghum Bicolor Genome. Scientific reports 9 (1) (2019)
Osler A Ortez
Genes and gene models, an important distinction. The New phytologist 228 (1) (2019)
Zihao Zheng, Stefan Hey, Talukder Jubery, Huyu Liu, Yu Yang, Lisa Coffey, Chenyong Miao, Brandi Sigmon, Osler A Ortez, Frank Hochholdinger, Baskar Ganapathysubramanian, Patrick S Schnable
Shared Genetic Control of Root System Architecture between Zea mays and Sorghum bicolor. Plant physiology 182 (2) (2019)
Chenyong Miao, Jingping Fang, De-Lin Li, Pingping Liang, Xingtan Zhang, Jinliang Yang, Osler A Ortez, Haibao Tang
Genotype-Corrector: improved genotype calls for genetic mapping in F2 and RIL populations. Scientific reports 8 (1) (2018)
Zhikai Liang, Shashi K Gupta, Cheng-Ting Yeh, Yang Zhang, Daniel W Ngu, Ramesh Kumar, Hemant T Patil, Kanulal D Mungra, Dev Vart Yadav, Abhishek Rathore, Rakesh K Srivastava, Rajeev Gupta, Jinliang Yang, Rajeev Kumar Varshney, Patrick S Schnable, Osler A Ortez
Phenotypic Data from Inbred Parents Can Improve Genomic Prediction in Pearl Millet Hybrids. G3 (Bethesda, Md.) 8 (7) (2018)
Chenyong Miao, Jinliang Yang, Osler A Ortez
Optimising the identification of causal variants across varying genetic architectures in crops. Plant biotechnology journal 17 (5) (2018)
Wenbin Mei, Lucas Boatwright, Guanqiao Feng, Osler A Ortez, W Brad Barbazuk
Evolutionarily Conserved Alternative Splicing Across Monocots. Genetics 207 (2) (2017)
Yang Zhang, Daniel W Ngu, Daniel Carvalho, Zhikai Liang, Yumou Qiu, Rebecca L Roston, Osler A Ortez
Differentially Regulated Orthologs in Sorghum and the Subgenomes of Maize. The Plant cell 29 (8) (2017)
Zhikai Liang, Osler A Ortez
RNA-Seq Based Analysis of Population Structure within the Maize Inbred B73. PloS one 11 (6) (2016)

Osler A Ortez.css-eqlu8i{font-size:small;padding-left:4px;} (James Schnable, James C Schnable)

Publication Activity (10 Years)

Top Topics

Top Venues

Osler A Ortez (James Schnable, James C Schnable)