Ronan C O'Malley (Ronan O'Malley)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 19

Top Venues

Nature plants

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

Plant direct

DOE Joint Genome Institute

University of Chicago (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

DOE Joint Genome Institute

United States

Group lead Sequencing Technologies :: Genomic Technologies

Salk Institute for Biological Studies

United States

Staff Scientist :: Genomic Analysis Laboratory

University of Wisconsin Madison

United States

Post-doc :: Botany

Education History

University of Chicago

United States

PHD :: Chemistry

University of Chicago

United States

BSC

Publications

Karen Serrano, Margaret Bezrutczyk, Danielle Goudeau, Thai Dao, Ronan C O'Malley, Rex R Malmstrom, Axel Visel, Henrik Vibe Scheller, Benjamin J Cole
Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nature plants (2024)
Karen Serrano, Margaret Bezrutczyk, Danielle Goudeau, Thai Dao, Ronan C O'Malley, Rex R Malmstrom, Axel Visel, Henrik Vibe Scheller, Benjamin J Cole
Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nature plants 10 (4) (2024)
Karen Serrano, Margaret Bezrutczyk, Danielle Goudeau, Thai Dao, Ronan C O'Malley, Rex R Malmstrom, Axel Visel, Henrik Vibe Scheller, Benjamin J Cole
Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nature plants 10 (4) (2024)
Karen Serrano, Margaret Bezrutczyk, Danielle Goudeau, Thai Dao, Ronan C O'Malley, Rex R Malmstrom, Axel Visel, Henrik Vibe Scheller, Benjamin J Cole
Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nature plants 10 (4) (2024)
Karen Serrano, Margaret Bezrutczyk, Danielle Goudeau, Thai Dao, Ronan C O'Malley, Rex R Malmstrom, Axel Visel, Henrik Vibe Scheller, Benjamin J Cole
Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nature plants 10 (4) (2024)
Karen Serrano, Margaret Bezrutczyk, Danielle Goudeau, Thai Dao, Ronan C O'Malley, Rex R Malmstrom, Axel Visel, Henrik Vibe Scheller, Benjamin J Cole
Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nature plants 10 (4) (2024)
Brennan Hyden, Dana L Carper, Paul E Abraham, Guoliang Yuan, Tao Yao, Leo Baumgart, Yu Zhang, Cindy Chen, Ronan C O'Malley, Jin-Gui Chen, Xiaohan Yang, Robert L Hettich, Gerald A Tuskan, Lawrence B Smart
Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination. Plant direct 7 (11) (2023)
Xiaoyu Weng, Haili Song, Avinash Sreedasyam, Taslima Haque, Li Zhang, Cindy Chen, Yuko Yoshinaga, Melissa Williams, Ronan C O'Malley, Jerry W Jenkins, Jeremy Schmutz, Thomas E Juenger
Transcriptome and DNA methylome divergence of inflorescence development between two ecotypes in Panicum hallii. Plant physiology (2023)
Guangchao Sun, Nishikant Wase, Shengqiang Shu, Jerry W Jenkins, Bangjun Zhou, J Vladimir Torres-Rodríguez, Cindy Chen, Laura Sandor, Christopher Plott, Yuko Yoshinga, Christopher Daum, Peng Qi, Kerrie Barry, Anna Lipzen, Luke Berry, Connor Pedersen, Thomas Gottilla, Ashley Foltz, Huihui Yu, Ronan C O'Malley, Chi Zhang, Katrien M Devos, Brandi Sigmon, Bin Yu, Toshihiro Obata, Jeremy Schmutz, Osler A Ortez
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass. Nature communications 13 (1) (2022)
Guangchao Sun, Nishikant Wase, Shengqiang Shu, Jerry W Jenkins, Bangjun Zhou, J Vladimir Torres-Rodríguez, Cindy Chen, Laura Sandor, Christopher Plott, Yuko Yoshinga, Christopher Daum, Peng Qi, Kerrie Barry, Anna Lipzen, Luke Berry, Connor Pedersen, Thomas Gottilla, Ashley Foltz, Huihui Yu, Ronan C O'Malley, Chi Zhang, Katrien M Devos, Brandi Sigmon, Bin Yu, Toshihiro Obata, Jeremy Schmutz, Osler A Ortez
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass. Nature communications 13 (1) (2022)
Guangchao Sun, Nishikant Wase, Shengqiang Shu, Jerry W Jenkins, Bangjun Zhou, J Vladimir Torres-Rodríguez, Cindy Chen, Laura Sandor, Christopher Plott, Yuko Yoshinga, Christopher Daum, Peng Qi, Kerrie Barry, Anna Lipzen, Luke Berry, Connor Pedersen, Thomas Gottilla, Ashley Foltz, Huihui Yu, Ronan C O'Malley, Chi Zhang, Katrien M Devos, Brandi Sigmon, Bin Yu, Toshihiro Obata, Jeremy Schmutz, Osler A Ortez
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass. Nature communications 13 (1) (2022)
Guangchao Sun, Nishikant Wase, Shengqiang Shu, Jerry W Jenkins, Bangjun Zhou, J Vladimir Torres-Rodríguez, Cindy Chen, Laura Sandor, Christopher Plott, Yuko Yoshinga, Christopher Daum, Peng Qi, Kerrie Barry, Anna Lipzen, Luke Berry, Connor Pedersen, Thomas Gottilla, Ashley Foltz, Huihui Yu, Ronan C O'Malley, Chi Zhang, Katrien M Devos, Brandi Sigmon, Bin Yu, Toshihiro Obata, Jeremy Schmutz, Osler A Ortez
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass. Nature communications 13 (1) (2022)
Daniela Strenkert, Matthew Mingay, Stefan Schmollinger, Cindy Chen, Ronan C O'Malley, Sabeeha S Merchant
An optimized ChIP-Seq framework for profiling histone modifications in Chromochloris zofingiensis . Plant direct 6 (3) (2022)
Magdalena E Potok, Zhenhui Zhong, Colette L Picard, Qikun Liu, Truman Do, Cassidy E Jacobsen, Ocean Sakr, Bilguudei Naranbaatar, Ruwan Thilakaratne, Zhanna Khnkoyan, Megan Purl, Harrison Cheng, Helena Vervaet, Suhua Feng, Shima Rayatpisheh, James A Wohlschlegel, Ronan C O'Malley, Joseph R Ecker, Steven E Jacobsen
The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis . Proceedings of the National Academy of Sciences of the United States of America 119 (3) (2022)
Marc W Van Goethem, Andrew R Osborn, Benjamin P Bowen, Peter F Andeer, Tami L Swenson, Alicia Clum, Robert Riley, Guifen He, Maxim Koriabine, Laura Sandor, Mi Yan, Christopher Daum, Yuko Yoshinaga, Thulani Peter Makhalanyane, Ferran Garcia-Pichel, Axel Visel, Len A Pennacchio, Ronan C O'Malley, Trent R Northen
Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics. Communications biology 4 (1) (2021)
Leo A Baumgart, Ji Eun Lee, Asaf Salamov, David J Dilworth, Hyunsoo Na, Matthew Mingay, Matthew J Blow, Yu Zhang, Yuko Yoshinaga, Chris G Daum, Ronan C O'Malley
Persistence and plasticity in bacterial gene regulation. Nature methods 18 (12) (2021)
Benjamin J Cole, Dominique Bergmann, Crysten E Blaby-Haas, Ian K Blaby, Kristofer E Bouchard, Siobhan M Brady, Doina Ciobanu, Devin Coleman-Derr, Samuel Leiboff, Jenny C Mortimer, Tatsuya Nobori, Seung Y Rhee, Jeremy Schmutz, Blake A Simmons, Anup K Singh, Neelima Sinha, John P Vogel, Ronan C O'Malley, Axel Visel, Diane E Dickel
Plant single-cell solutions for energy and the environment. Communications biology 4 (1) (2021)
Lori B Huberman, Vincent W Wu, David J Kowbel, Juna Lee, Christopher Daum, Igor V Grigoriev, Ronan C O'Malley, N Louise Glass
DNA affinity purification sequencing and transcriptional profiling reveal new aspects of nitrogen regulation in a filamentous fungus. Proceedings of the National Academy of Sciences of the United States of America 118 (13) (2021)
Monika S Fischer, Vincent W Wu, Ji E Lee, Ronan C O'Malley, N Louise Glass
Regulation of Cell-to-Cell Communication and Cell Wall Integrity by a Network of MAP Kinase Pathways and Transcription Factors in Neurospora crassa. Genetics 209 (2) (2018)

Ronan C O'Malley.css-eqlu8i{font-size:small;padding-left:4px;} (Ronan O'Malley)

Publication Activity (10 Years)

Top Topics

Top Venues

Ronan C O'Malley (Ronan O'Malley)