José R Penadés

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 49

Top Venues

Nature microbiology

Nature communications

Microbiology spectrum

Nucleic acids research

Imperial College London

Universidad de Zaragoza (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Imperial College London Jul 01 2020

United Kingdom

Director and Professor of Microbiology :: MRC Centre for Molecular Bacteriology and Infection

University of Glasgow - Jun 30 2020

United Kingdom

Professor of Microbiology :: Institute of Infection, Immunity and Inflammation

Education History

Universidad de Zaragoza

Spain

PHD :: Veterinary School

Universidad de Zaragoza

Spain

PHD :: Veterinary School

Publications

Sara Zamora-Caballero, Cora Chmielowska, Nuria Quiles-Puchalt, Aisling Brady, Francisca Gallego Del Sol, Javier Mancheño-Bonillo, Alonso Felipe-Ruíz, Wilfried J J Meijer, José R Penadés, Alberto Marina
Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision. Nature microbiology 9 (1) (2024)
Jakob T Rostøl, Nuria Quiles-Puchalt, Pablo Iturbe-Sanz, Iñigo Lasa, José R Penadés
Bacteriophages avoid autoimmunity from cognate immune systems as an intrinsic part of their life cycles. Nature microbiology 9 (5) (2024)
Sara Zamora-Caballero, Cora Chmielowska, Nuria Quiles-Puchalt, Aisling Brady, Francisca Gallego Del Sol, Javier Mancheño-Bonillo, Alonso Felipe-Ruíz, Wilfried J J Meijer, José R Penadés, Alberto Marina
Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision. Nature microbiology 9 (1) (2024)
Sara Zamora-Caballero, Cora Chmielowska, Nuria Quiles-Puchalt, Aisling Brady, Francisca Gallego Del Sol, Javier Mancheño-Bonillo, Alonso Felipe-Ruíz, Wilfried J J Meijer, José R Penadés, Alberto Marina
Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision. Nature microbiology 9 (1) (2024)
Sara Zamora-Caballero, Cora Chmielowska, Nuria Quiles-Puchalt, Aisling Brady, Francisca Gallego Del Sol, Javier Mancheño-Bonillo, Alonso Felipe-Ruíz, Wilfried J J Meijer, José R Penadés, Alberto Marina
Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision. Nature microbiology 9 (1) (2024)
Sanne Wolput, Cédric Lood, Alfred Fillol-Salom, Yorben Casters, Alaa Albasiony, William Cenens, Kristof Vanoirbeek, Alison Kerremans, Rob Lavigne, José R Penadés, Abram Aertsen
Phage-host co-evolution has led to distinct generalized transduction strategies. Nucleic acids research 52 (13) (2024)
Sara Zamora-Caballero, Cora Chmielowska, Nuria Quiles-Puchalt, Aisling Brady, Francisca Gallego Del Sol, Javier Mancheño-Bonillo, Alonso Felipe-Ruíz, Wilfried J J Meijer, José R Penadés, Alberto Marina
Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision. Nature microbiology 9 (1) (2024)
Jakob T Rostøl, Nuria Quiles-Puchalt, Pablo Iturbe-Sanz, Iñigo Lasa, José R Penadés
Bacteriophages avoid autoimmunity from cognate immune systems as an intrinsic part of their life cycles. Nature microbiology 9 (5) (2024)
Sara Zamora-Caballero, Cora Chmielowska, Nuria Quiles-Puchalt, Aisling Brady, Francisca Gallego Del Sol, Javier Mancheño-Bonillo, Alonso Felipe-Ruíz, Wilfried J J Meijer, José R Penadés, Alberto Marina
Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision. Nature microbiology 9 (1) (2024)
Sanne Wolput, Cédric Lood, Alfred Fillol-Salom, Yorben Casters, Alaa Albasiony, William Cenens, Kristof Vanoirbeek, Alison Kerremans, Rob Lavigne, José R Penadés, Abram Aertsen
Phage-host co-evolution has led to distinct generalized transduction strategies. Nucleic acids research 52 (13) (2024)
Sara Zamora-Caballero, Cora Chmielowska, Nuria Quiles-Puchalt, Aisling Brady, Francisca Gallego Del Sol, Javier Mancheño-Bonillo, Alonso Felipe-Ruíz, Wilfried J J Meijer, José R Penadés, Alberto Marina
Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision. Nature microbiology 9 (1) (2024)
Sara Zamora-Caballero, Cora Chmielowska, Nuria Quiles-Puchalt, Aisling Brady, Francisca Gallego Del Sol, Javier Mancheño-Bonillo, Alonso Felipe-Ruíz, Wilfried J J Meijer, José R Penadés, Alberto Marina
Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision. Nature microbiology (2024)
Jakob T Rostøl, Nuria Quiles-Puchalt, Pablo Iturbe-Sanz, Iñigo Lasa, José R Penadés
Bacteriophages avoid autoimmunity from cognate immune systems as an intrinsic part of their life cycles. Nature microbiology 9 (5) (2024)
Lingchen He, Laura Miguel-Romero, Jonasz B Patkowski, Nasser Alqurainy, Eduardo P C Rocha, Tiago R D Costa, Alfred Fillol-Salom, José R Penadés
Tail assembly interference is a common strategy in bacterial antiviral defenses. Nature communications 15 (1) (2024)
Jakob T Rostøl, Nuria Quiles-Puchalt, Pablo Iturbe-Sanz, Iñigo Lasa, José R Penadés
Bacteriophages avoid autoimmunity from cognate immune systems as an intrinsic part of their life cycles. Nature microbiology (2024)
Sanne Wolput, Cédric Lood, Alfred Fillol-Salom, Yorben Casters, Alaa Albasiony, William Cenens, Kristof Vanoirbeek, Alison Kerremans, Rob Lavigne, José R Penadés, Abram Aertsen
Phage-host co-evolution has led to distinct generalized transduction strategies. Nucleic acids research (2024)
Jakob T Rostøl, Nuria Quiles-Puchalt, Pablo Iturbe-Sanz, Iñigo Lasa, José R Penadés
Bacteriophages avoid autoimmunity from cognate immune systems as an intrinsic part of their life cycles. Nature microbiology 9 (5) (2024)
Carla Sanz-Frasquet, J Rafael Ciges-Tomas, Christian Alite, José R Penadés, Alberto Marina
The Bacteriophage-Phage-Inducible Chromosomal Island Arms Race Designs an Interkingdom Inhibitor of dUTPases. Microbiology spectrum 11 (1) (2023)
Carla Sanz-Frasquet, J Rafael Ciges-Tomas, Christian Alite, José R Penadés, Alberto Marina
The Bacteriophage-Phage-Inducible Chromosomal Island Arms Race Designs an Interkingdom Inhibitor of dUTPases. Microbiology spectrum 11 (1) (2023)
Mohammed A Thabet, José R Penadés, Andreas F Haag
The ClpX protease is essential for inactivating the CI master repressor and completing prophage induction in Staphylococcus aureus. Nature communications 14 (1) (2023)
Carla Sanz-Frasquet, J Rafael Ciges-Tomas, Christian Alite, José R Penadés, Alberto Marina
The Bacteriophage-Phage-Inducible Chromosomal Island Arms Race Designs an Interkingdom Inhibitor of dUTPases. Microbiology spectrum (2023)
Jorge André Moura de Sousa, Alfred Fillol-Salom, José R Penadés, Eduardo P C Rocha
Identification and characterization of thousands of bacteriophage satellites across bacteria. Nucleic acids research (2023)
Carla Sanz-Frasquet, J Rafael Ciges-Tomas, Christian Alite, José R Penadés, Alberto Marina
The Bacteriophage-Phage-Inducible Chromosomal Island Arms Race Designs an Interkingdom Inhibitor of dUTPases. Microbiology spectrum 11 (1) (2023)
Sergio Arredondo-Alonso, George Blundell-Hunter, Zuyi Fu, Rebecca A Gladstone, Alfred Fillol-Salom, Jessica Loraine, Elaine Cloutman-Green, Pål J Johnsen, Ørjan Samuelsen, Anna Kaarina Pöntinen, François Cléon, Susana Chavez-Bueno, Miguel A De La Cruz, Miguel A Ares, Manivanh Vongsouvath, Agnieszka Chmielarczyk, Carolyne Horner, Nigel Klein, Alan McNally, Joice N Reis, José R Penadés, Nicholas R Thomson, Jukka Corander, Peter W Taylor, Alex J McCarthy
Evolutionary and functional history of the Escherichia coli K1 capsule. Nature communications 14 (1) (2023)
Carla Sanz-Frasquet, J Rafael Ciges-Tomas, Christian Alite, José R Penadés, Alberto Marina
The Bacteriophage-Phage-Inducible Chromosomal Island Arms Race Designs an Interkingdom Inhibitor of dUTPases. Microbiology spectrum (2023)
Rodrigo Ibarra-Chávez, Julien Reboud, José R Penadés, Jonathan M Cooper
Phage-Inducible Chromosomal Islands as a Diagnostic Platform to Capture and Detect Bacterial Pathogens. Advanced science (Weinheim, Baden-Wurttemberg, Germany) (2023)
Carla Sanz-Frasquet, J Rafael Ciges-Tomas, Christian Alite, José R Penadés, Alberto Marina
The Bacteriophage-Phage-Inducible Chromosomal Island Arms Race Designs an Interkingdom Inhibitor of dUTPases. Microbiology spectrum (2023)
Francisca Gallego Del Sol, Nuria Quiles-Puchalt, Aisling Brady, José R Penadés, Alberto Marina
Insights into the mechanism of action of the arbitrium communication system in SPbeta phages. Nature communications 13 (1) (2022)
Laura Miguel-Romero, Mohammed Alqasmi, Julio Bacarizo, Jason A Tan, Richard J Cogdell, John Chen, Olwyn Byron, Gail E Christie, Alberto Marina, José R Penadés
Non-canonical Staphylococcus aureus pathogenicity island repression. Nucleic acids research 50 (19) (2022)
Rodrigo Ibarra-Chávez, Aisling Brady, John Yu-Shen Chen, José R Penadés, Andreas F Haag
Phage-inducible chromosomal islands promote genetic variability by blocking phage reproduction and protecting transductants from phage lysis. PLoS genetics 18 (3) (2022)
Andreas F Haag, Magdalena Podkowik, Rodrigo Ibarra-Chávez, Francisca Gallego Del Sol, Geeta Ram, John Chen, Alberto Marina, Richard P Novick, José R Penadés
A regulatory cascade controls Staphylococcus aureus pathogenicity island activation. Nature microbiology 6 (10) (2021)
N'Toia C Hawkins, James L Kizziah, José R Penadés, Terje Dokland
Shape shifter: redirection of prolate phage capsid assembly by staphylococcal pathogenicity islands. Nature communications 12 (1) (2021)
Suzanne Humphrey, Alvaro San Millan, Macarena Toll-Riera, John Connolly, Alejandra Flor-Duro, John Chen, Carles Ubeda, Pauline Hall Barrientos, José R Penadés
Staphylococcal phages and pathogenicity islands drive plasmid evolution. Nature communications 12 (1) (2021)
Alfred Fillol-Salom, Rodrigo Bacigalupe, Suzanne Humphrey, Yin Ning Chiang, John Yu-Shen Chen, José R Penadés
Lateral transduction is inherent to the life cycle of the archetypical Salmonella phage P22. Nature communications 12 (1) (2021)
Gonzalo Yebra, Andreas F Haag, Maan M Neamah, Bryan A Wee, Emily J Richardson, Pilar Horcajo, Sander Granneman, María Ángeles Tormo-Mas, Ricardo de la Fuente, J Ross Fitzgerald, José R Penadés
Radical genome remodelling accompanied the emergence of a novel host-restricted bacterial pathogen. PLoS pathogens 17 (5) (2021)
Suzanne Humphrey, Alfred Fillol-Salom, Nuria Quiles-Puchalt, Rodrigo Ibarra-Chávez, Andreas F Haag, John Chen, José R Penadés
Bacterial chromosomal mobility via lateral transduction exceeds that of classical mobile genetic elements. Nature communications 12 (1) (2021)
Rodrigo Ibarra-Chávez, Andreas F Haag, Pedro Dorado-Morales, Iñigo Lasa, José R Penadés
Rebooting Synthetic Phage-Inducible Chromosomal Islands: One Method to Forge Them All. Biodesign research 2020 (2020)
Kotaro Kiga, Xin-Ee Tan, Rodrigo Ibarra-Chávez, Shinya Watanabe, Yoshifumi Aiba, Yusuke Sato'o, Feng-Yu Li, Teppei Sasahara, Bintao Cui, Moriyuki Kawauchi, Tanit Boonsiri, Kanate Thitiananpakorn, Yusuke Taki, Aa Haeruman Azam, Masato Suzuki, José R Penadés, Longzhu Cui
Development of CRISPR-Cas13a-based antimicrobials capable of sequence-specific killing of target bacteria. Nature communications 11 (1) (2020)
Yin Ning Chiang, José R Penadés, John Yu-Shen Chen
Genetic transduction by phages and chromosomal islands: The new and noncanonical. PLoS pathogens 15 (8) (2019)
Rodrigo Bacigalupe, María Ángeles Tormo-Mas, José R Penadés, J Ross Fitzgerald
A multihost bacterial pathogen overcomes continuous population bottlenecks to adapt to new host species. Science advances 5 (11) (2019)
J Rafael Ciges-Tomas, Christian Alite, Suzanne Humphrey, J Donderis, Janine Bowring, Xavier Salvatella, José R Penadés, Alberto Marina
The structure of a polygamous repressor reveals how phage-inducible chromosomal islands spread in nature. Nature communications 10 (1) (2019)
Alfred Fillol-Salom, Ahlam Alsaadi, Jorge André Moura de Sousa, Li Zhong, Kevin R Foster, Eduardo P C Rocha, José R Penadés, Hanne Ingmer, Jakob Haaber
Bacteriophages benefit from generalized transduction. PLoS pathogens 15 (7) (2019)
Alfred Fillol-Salom, Roser Martínez-Rubio, Rezheen F Abdulrahman, John Chen, Robert Davies, José R Penadés
Phage-inducible chromosomal islands are ubiquitous within the bacterial universe. The ISME journal 12 (9) (2018)
Maite Villanueva, Begoña García, Jaione Valle, Beatriz Rapún, Ruiz De Los Mozos Igor, Cristina Solano, Miguel Martí, José R Penadés, Alejandro Toledo-Arana, Iñigo Lasa
Sensory deprivation in Staphylococcus aureus. Nature communications 9 (1) (2018)
Lucía Fernández, Silvia González, Nuria Quiles-Puchalt, Diana Gutiérrez, José R Penadés, Pilar García, Ana Rodríguez
Lysogenization of Staphylococcus aureus RN450 by phages ϕ11 and ϕ80α leads to the activation of the SigB regulon. Scientific reports 8 (1) (2018)
John Yu-Shen Chen, Nuria Quiles-Puchalt, Yin Ning Chiang, Rodrigo Bacigalupe, Alfred Fillol-Salom, Melissa Su-Juan Chee, J Ross Fitzgerald, José R Penadés
Genome hypermobility by lateral transduction. Science (New York, N.Y.) 362 (6411) (2018)
Nuria Carpena, Keith A Manning, Terje Dokland, Alberto Marina, José R Penadés
Convergent evolution of pathogenicity islands in helper cos phage interference. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 371 (1707) (2017)
Janine Bowring, Maan M Neamah, Jorge Donderis, Ignacio Mir-Sanchis, Christian Alite, J Rafael Ciges-Tomas, Elisa Maiques, Iltyar Medmedov, Alberto Marina, José R Penadés
Pirating conserved phage mechanisms promotes promiscuous staphylococcal pathogenicity island transfer. eLife 6 (2017)
Christian Alite, Suzanne Humphrey, Jordi Donderis, Elisa Maiques, J Rafael Ciges-Tomas, José R Penadés, Alberto Marina
Dissecting the link between the enzymatic activity and the SaPI inducing capacity of the phage 80α dUTPase. Scientific reports 7 (1) (2017)

José R Penadés.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

José R Penadés