Alan McNally

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 51

Top Venues

mSystems

Nature communications

Antimicrobial agents and chemotherapy

PloS one

University of Birmingham

University of Edinburgh (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Birmingham

United Kingdom

Professor of Microbial Evolutionary Genomics :: Institute of Microbiology and infection

University of Birmingham

United Kingdom

Reader in Microbial Evolutionary Genomics, Institute Director :: Institute of Microbiology and Infection

Nottingham Trent University

United Kingdom

Reader Microbial Genomics :: Science and Technology

Nottingham Trent University

United Kingdom

Lecturer Microbiology :: Science and Technology

Veterinary Laboratories Agency

United Kingdom

PDRA :: Bacteriology

University of Bristol

United Kingdom

PDRA :: Biochemistry

Education History

University of Edinburgh

United Kingdom

PHD :: Royal (Dick) Veterinary School

University of Glasgow

United Kingdom

BSC :: Infection and Immunity

Publications

Rebecca J Hall, Ann E Snaith, Matthew J N Thomas, Michael A Brockhurst, Alan McNally
Multidrug resistance plasmids commonly reprogram the expression of metabolic genes in Escherichia coli . mSystems 9 (3) (2024)
Xiaoliang Ba, Yingyi Guo, Robert A Moran, Emma L Doughty, Baomo Liu, Likang Yao, Jiahui Li, Nanhao He, Siquan Shen, Yang Li, Willem van Schaik, Alan McNally, Mark A Holmes, Chao Zhuo
Global emergence of a hypervirulent carbapenem-resistant Escherichia coli ST410 clone. Nature communications 15 (1) (2024)
Samuel Quarton, Kirsty McGee, Nicola Cumley, Mahboobeh Behruznia, Charlotte Jeff, Kylie Belchamber, Michael J Cox, David Thickett, Aaron Scott, Dhruv Parekh, Alan McNally, Elizabeth Sapey
Towards personalised anti-microbial and immune approaches to infections in acute care. Can real-time genomic-informed diagnosis of pathogens, and immune-focused therapies improve outcomes for patients? An observational, experimental study protocol. PloS one 19 (3) (2024)
Rebecca J Hall, Ann E Snaith, Matthew J N Thomas, Michael A Brockhurst, Alan McNally
Multidrug resistance plasmids commonly reprogram the expression of metabolic genes in Escherichia coli . mSystems 9 (3) (2024)
Xiaoliang Ba, Yingyi Guo, Robert A Moran, Emma L Doughty, Baomo Liu, Likang Yao, Jiahui Li, Nanhao He, Siquan Shen, Yang Li, Willem van Schaik, Alan McNally, Mark A Holmes, Chao Zhuo
Global emergence of a hypervirulent carbapenem-resistant Escherichia coli ST410 clone. Nature communications 15 (1) (2024)
Xiaoliang Ba, Yingyi Guo, Robert A Moran, Emma L Doughty, Baomo Liu, Likang Yao, Jiahui Li, Nanhao He, Siquan Shen, Yang Li, Willem van Schaik, Alan McNally, Mark A Holmes, Chao Zhuo
Global emergence of a hypervirulent carbapenem-resistant Escherichia coli ST410 clone. Nature communications 15 (1) (2024)
Samuel Quarton, Kirsty McGee, Nicola Cumley, Mahboobeh Behruznia, Charlotte Jeff, Kylie Belchamber, Michael J Cox, David Thickett, Aaron Scott, Dhruv Parekh, Alan McNally, Elizabeth Sapey
Towards personalised anti-microbial and immune approaches to infections in acute care. Can real-time genomic-informed diagnosis of pathogens, and immune-focused therapies improve outcomes for patients? An observational, experimental study protocol. PloS one 19 (3) (2024)
Rebecca J Hall, Ann E Snaith, Matthew J N Thomas, Michael A Brockhurst, Alan McNally
Multidrug resistance plasmids commonly reprogram the expression of metabolic genes in Escherichia coli . mSystems (2024)
Samuel Quarton, Kirsty McGee, Nicola Cumley, Mahboobeh Behruznia, Charlotte Jeff, Kylie Belchamber, Michael J Cox, David Thickett, Aaron Scott, Dhruv Parekh, Alan McNally, Elizabeth Sapey
Towards personalised anti-microbial and immune approaches to infections in acute care. Can real-time genomic-informed diagnosis of pathogens, and immune-focused therapies improve outcomes for patients? An observational, experimental study protocol. PloS one 19 (3) (2024)
Samuel Quarton, Alana C Livesey, Charlotte Jeff, Christopher M Hatton, Aaron Scott, Dhruv Parekh, David R Thickett, Alan McNally, Elizabeth Sapey
Metagenomics in the Diagnosis of Pneumonia: Protocol for a Systematic Review. JMIR research protocols 13 (2024)
Xiaoliang Ba, Yingyi Guo, Robert A Moran, Emma L Doughty, Baomo Liu, Likang Yao, Jiahui Li, Nanhao He, Siquan Shen, Yang Li, Willem van Schaik, Alan McNally, Mark A Holmes, Chao Zhuo
Global emergence of a hypervirulent carbapenem-resistant Escherichia coli ST410 clone. Nature communications 15 (1) (2024)
Rebecca J Hall, Ann E Snaith, Matthew J N Thomas, Michael A Brockhurst, Alan McNally
Multidrug resistance plasmids commonly reprogram the expression of metabolic genes in Escherichia coli . mSystems 9 (3) (2024)
Laura Carrilero, Steven J Dunn, Robert A Moran, Alan McNally, Michael A Brockhurst
Evolutionary Responses to Acquiring a Multidrug Resistance Plasmid Are Dominated by Metabolic Functions across Diverse Escherichia coli Lineages. mSystems 8 (1) (2023)
Ping Zhang, Huangdu Hu, Qiucheng Shi, Long Sun, Xueqing Wu, Xiaoting Hua, Alan McNally, Yan Jiang, Yunsong Yu, Xiaoxing Du
The Effect of β-Lactam Antibiotics on the Evolution of Ceftazidime/Avibactam and Cefiderocol Resistance in KPC-Producing Klebsiella pneumoniae. Antimicrobial agents and chemotherapy 67 (3) (2023)
Laura Carrilero, Steven J Dunn, Robert A Moran, Alan McNally, Michael A Brockhurst
Evolutionary Responses to Acquiring a Multidrug Resistance Plasmid Are Dominated by Metabolic Functions across Diverse Escherichia coli Lineages. mSystems 8 (1) (2023)
Ping Zhang, Huangdu Hu, Qiucheng Shi, Long Sun, Xueqing Wu, Xiaoting Hua, Alan McNally, Yan Jiang, Yunsong Yu, Xiaoxing Du
The Effect of β-Lactam Antibiotics on the Evolution of Ceftazidime/Avibactam and Cefiderocol Resistance in KPC-Producing Klebsiella pneumoniae. Antimicrobial agents and chemotherapy 67 (3) (2023)
Ping Zhang, Huangdu Hu, Qiucheng Shi, Long Sun, Xueqing Wu, Xiaoting Hua, Alan McNally, Yan Jiang, Yunsong Yu, Xiaoxing Du
The Effect of β-Lactam Antibiotics on the Evolution of Ceftazidime/Avibactam and Cefiderocol Resistance in KPC-Producing Klebsiella pneumoniae. Antimicrobial agents and chemotherapy 67 (3) (2023)
Laura Carrilero, Steven J Dunn, Robert A Moran, Alan McNally, Michael A Brockhurst
Evolutionary Responses to Acquiring a Multidrug Resistance Plasmid Are Dominated by Metabolic Functions across Diverse Escherichia coli Lineages. mSystems (2023)
Ping Zhang, Huangdu Hu, Qiucheng Shi, Long Sun, Xueqing Wu, Xiaoting Hua, Alan McNally, Yan Jiang, Yunsong Yu, Xiaoxing Du
The Effect of β-Lactam Antibiotics on the Evolution of Ceftazidime/Avibactam and Cefiderocol Resistance in KPC-Producing Klebsiella pneumoniae. Antimicrobial agents and chemotherapy (2023)
Ping Zhang, Huangdu Hu, Qiucheng Shi, Long Sun, Xueqing Wu, Xiaoting Hua, Alan McNally, Yan Jiang, Yunsong Yu, Xiaoxing Du
The Effect of β-Lactam Antibiotics on the Evolution of Ceftazidime/Avibactam and Cefiderocol Resistance in KPC-Producing Klebsiella pneumoniae. Antimicrobial agents and chemotherapy 67 (3) (2023)
Laura Carrilero, Steven J Dunn, Robert A Moran, Alan McNally, Michael A Brockhurst
Evolutionary Responses to Acquiring a Multidrug Resistance Plasmid Are Dominated by Metabolic Functions across Diverse Escherichia coli Lineages. mSystems 8 (1) (2023)
Sergio Arredondo-Alonso, George Blundell-Hunter, Zuyi Fu, Rebecca A Gladstone, Alfred Fillol-Salom, Jessica Loraine, Elaine Cloutman-Green, Pål J Johnsen, Ørjan Samuelsen, Anna Kaarina Pöntinen, François Cléon, Susana Chavez-Bueno, Miguel A De La Cruz, Miguel A Ares, Manivanh Vongsouvath, Agnieszka Chmielarczyk, Carolyne Horner, Nigel Klein, Alan McNally, Joice N Reis, José R Penadés, Nicholas R Thomson, Jukka Corander, Peter W Taylor, Alex J McCarthy
Evolutionary and functional history of the Escherichia coli K1 capsule. Nature communications 14 (1) (2023)
Laura Carrilero, Steven J Dunn, Robert A Moran, Alan McNally, Michael A Brockhurst
Evolutionary Responses to Acquiring a Multidrug Resistance Plasmid Are Dominated by Metabolic Functions across Diverse Escherichia coli Lineages. mSystems 8 (1) (2023)
Laura Carrilero, Steven J Dunn, Robert A Moran, Alan McNally, Michael A Brockhurst
Evolutionary Responses to Acquiring a Multidrug Resistance Plasmid Are Dominated by Metabolic Functions across Diverse Escherichia coli Lineages. mSystems (2023)
Robert A Moran, Liu Baomo, Emma L Doughty, Yingyi Guo, Xiaoliang Ba, Willem van Schaik, Chao Zhuo, Alan McNally
Extended-Spectrum β-Lactamase Genes Traverse the Escherichia coli Populations of Intensive Care Unit Patients, Staff, and Environment. Microbiology spectrum (2023)
Ya Hu, Yongqiang Yang, Yu Feng, Qingqing Fang, Chengcheng Wang, Feifei Zhao, Alan McNally, Zhiyong Zong
Prevalence and clonal diversity of carbapenem-resistant Klebsiella pneumoniae causing neonatal infections: A systematic review of 128 articles across 30 countries. PLoS medicine 20 (6) (2023)
Laura Carrilero, Steven J Dunn, Robert A Moran, Alan McNally, Michael A Brockhurst
Evolutionary Responses to Acquiring a Multidrug Resistance Plasmid Are Dominated by Metabolic Functions across Diverse Escherichia coli Lineages. mSystems 8 (1) (2023)
Christopher H Connor, Amanda Z Zucoloto, John T Munnoch, Ian-Ling Yu, Jukka Corander, Paul A Hoskisson, Braedon McDonald, Alan McNally
Multidrug-resistant E. coli encoding high genetic diversity in carbohydrate metabolism genes displace commensal E. coli from the intestinal tract. PLoS biology 21 (10) (2023)
Ya Hu, Robert A Moran, Grace A Blackwell, Alan McNally, Zhiyong Zong
Fine-Scale Reconstruction of the Evolution of FII-33 Multidrug Resistance Plasmids Enables High-Resolution Genomic Surveillance. mSystems 7 (1) (2022)
Matthew Davies, Gianluca Galazzo, Jarne M van Hattem, Maris S Arcilla, Damian C Melles, Menno D de Jong, Constance Schultsz, Petra F G Wolffs, Alan McNally, Willem van Schaik, John Penders
Enterobacteriaceae and Bacteroidaceae provide resistance to travel-associated intestinal colonization by multi-drug resistant Escherichia coli . Gut microbes 14 (1) (2022)
Ying Liu, Shichao Zhu, Li Wei, Yu Feng, Lin Cai, Steven Dunn, Alan McNally, Zhiyong Zong
Arm race among closely-related carbapenem-resistant Klebsiella pneumoniae clones. ISME communications 2 (1) (2022)
Fiona Ashford, Angus Best, Steven J Dunn, Zahra Ahmed, Henna Siddiqui, Jordan Melville, Samuel Wilkinson, Jeremy Mirza, Nicola Cumley, Joanne Stockton, Jack Ferguson, Lucy Wheatley, Elizabeth Ratcliffe, Anna Casey, Tim Plant, null null, Joshua Quick, Alex Richter, Nicholas Loman, Alan McNally
SARS-CoV-2 Testing in the Community: Testing Positive Samples with the TaqMan SARS-CoV-2 Mutation Panel To Find Variants in Real Time. Journal of clinical microbiology 60 (4) (2022)
Ya Hu, Hui Zhang, Li Wei, Yu Feng, Hongxia Wen, Jingwen Li, Zhihui Zhang, Yongqiang Yang, Robert A Moran, Alan McNally, Zhiyong Zong
Competitive Transmission of Carbapenem-Resistant Klebsiella pneumoniae in a Newly Opened Intensive Care Unit. mSystems (2022)
Qingqing Fang, Yu Feng, Alan McNally, Zhiyong Zong
Characterization of phage resistance and phages capable of intestinal decolonization of carbapenem-resistant Klebsiella pneumoniae in mice. Communications biology 5 (1) (2022)
Jeroen Geurtsen, Mark de Been, Eveline Weerdenburg, Aldert Zomer, Alan McNally, Jan Poolman
Genomics and pathotypes of the many faces of Escherichia coli. FEMS microbiology reviews 46 (6) (2022)
Tommi Mäklin, Harry A Thorpe, Anna Kaarina Pöntinen, Rebecca A Gladstone, Yan Shao, Maiju E Pesonen, Alan McNally, Pål J Johnsen, Ørjan Samuelsen, Trevor D Lawley, Antti Honkela, Jukka Corander
Strong pathogen competition in neonatal gut colonisation. Nature communications 13 (1) (2022)
Li Wei, Linfei Wu, Hongxia Wen, Yu Feng, Shichao Zhu, Ying Liu, Li Tang, Emma Doughty, Willem van Schaik, Alan McNally, Zhiyong Zong
Spread of Carbapenem-Resistant Klebsiella pneumoniae in an Intensive Care Unit: A Whole-Genome Sequence-Based Prospective Observational Study. Microbiology spectrum 9 (1) (2021)
Michael Kidd, Alex Richter, Angus Best, Nicola Cumley, Jeremy Mirza, Benita Percival, Megan Mayhew, Oliver Megram, Fiona Ashford, Thomas White, Emma Moles-Garcia, Liam Crawford, Andrew Bosworth, Sowsan F Atabani, Tim Plant, Alan McNally
S-Variant SARS-CoV-2 Lineage B1.1.7 Is Associated With Significantly Higher Viral Load in Samples Tested by TaqPath Polymerase Chain Reaction. The Journal of infectious diseases 223 (10) (2021)
Steven Dunn, Laura Carrilero, Michael A Brockhurst, Alan McNally
Limited and Strain-Specific Transcriptional and Growth Responses to Acquisition of a Multidrug Resistance Plasmid in Genetically Diverse Escherichia coli Lineages. mSystems 6 (2) (2021)
Jing Yang, Haiyan Long, Ya Hu, Yu Feng, Alan McNally, Zhiyong Zong
Klebsiella oxytoca Complex: Update on Taxonomy, Antimicrobial Resistance, and Virulence. Clinical microbiology reviews (2021)
Jack Ferguson, Steven J Dunn, Angus Best, Jeremy Mirza, Benita Percival, Megan Mayhew, Oliver Megram, Fiona B Ashford, Thomas White, Emma Moles-Garcia, Liam Crawford, Tim Plant, Andrew Bosworth, Michael Kidd, Alex Richter, Jonathan Deeks, Alan McNally
Validation testing to determine the sensitivity of lateral flow testing for asymptomatic SARS-CoV-2 detection in low prevalence settings: Testing frequency and public health messaging is key. PLoS biology 19 (4) (2021)
Danai Papakonstantinou, Steven J Dunn, Simon J Draper, Adam F Cunningham, Matthew K O'Shea, Alan McNally
Mapping Gene-by-Gene Single-Nucleotide Variation in 8,535 Mycobacterium tuberculosis Genomes: a Resource To Support Potential Vaccine and Drug Development. mSphere 6 (2) (2021)
Alex Richter, Tim Plant, Michael Kidd, Andrew Bosworth, Megan Mayhew, Oliver Megram, Fiona Ashworth, Liam Crawford, Thomas White, Emma Moles-Garcia, Jeremy Mirza, Benita Percival, Alan McNally
How to establish an academic SARS-CoV-2 testing laboratory. Nature microbiology 5 (12) (2020)
Daniel Storey, Alan McNally, Mia Åstrand, Joana Sá-Pessoa, Isabel Rodriguez-Escudero, Bronagh Elmore, Leyre Palacios, Helina Marshall, Laura Hobley, Maria Molina, Victor J Cid, Tiina A Salminen, José Antonio Bengoechea
Klebsiella pneumoniae type VI secretion system-mediated microbial competition is PhoPQ controlled and reactive oxygen species dependent. PLoS pathogens 16 (3) (2020)
Sheyda Azimi, Aled E L Roberts, Shengyun Peng, Joshua S Weitz, Alan McNally, Samuel P Brown, Stephen P Diggle
Allelic polymorphism shapes community function in evolving Pseudomonas aeruginosa populations. The ISME journal 14 (8) (2020)
Yu Feng, Lu Liu, Ji Lin, Ke Ma, Haiyan Long, Li Wei, Yi Xie, Alan McNally, Zhiyong Zong
Key evolutionary events in the emergence of a globally disseminated, carbapenem resistant clone in the Escherichia coli ST410 lineage. Communications biology 2 (2019)
Haiyan Long, Yu Feng, Ke Ma, Lu Liu, Alan McNally, Zhiyong Zong
The co-transfer of plasmid-borne colistin-resistant genes mcr-1 and mcr-3.5, the carbapenemase gene blaNDM-5 and the 16S methylase gene rmtB from Escherichia coli. Scientific reports 9 (1) (2019)
Xiaoxia Zhang, Ji Lin, Yu Feng, Xiaohui Wang, Alan McNally, Zhiyong Zong
Identification of Mycobacterium chimaera in heater-cooler units in China. Scientific reports 8 (1) (2018)
Xiaoxia Zhang, Yu Feng, Weilong Zhou, Alan McNally, Zhiyong Zong
Cryptic transmission of ST405 Escherichia coli carrying bla NDM-4 in hospital. Scientific reports 8 (1) (2018)
James O McInerney, Alan McNally, Mary J O'Connell
Why prokaryotes have pangenomes. Nature microbiology 2 (2017)
Marjon G J de Vos, Marcin Zagorski, Alan McNally, Tobias Bollenbach
Interaction networks, ecological stability, and collective antibiotic tolerance in polymicrobial infections. Proceedings of the National Academy of Sciences of the United States of America 114 (40) (2017)

Alan McNally.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Alan McNally