Kaifu Chen

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 35

Top Topics

Endothelial Cells

Transforming Growth Factor

Dna Methylation

Top Venues

Nature communications

Research square

Nucleic acids research

This page only lists publications with an associated author ORCID identifier.

Publications

Grzegorz Ira, Yang Yu, Xin Wang, Jordan Fox, Ruofan Yu, Brenna McCauley, Nicolas Nikoloutsos, Qian Li, Philip Hastings, Weiwei Dang, Kaifu Chen, Pilendra Thakre
Yeast EndoG prevents genome instability by degrading cytoplasmic DNA. Research square (2024)
Yang Yu, Xin Wang, Jordan Fox, Ruofan Yu, Pilendra Thakre, Brenna McCauley, Nicolas Nikoloutsos, Yang Yu, Qian Li, P J Hastings, Weiwei Dang, Kaifu Chen, Grzegorz Ira
Yeast EndoG prevents genome instability by degrading extranuclear DNA species. Nature communications 15 (1) (2024)
Yang Yu, Xin Wang, Jordan Fox, Ruofan Yu, Pilendra Thakre, Brenna McCauley, Nicolas Nikoloutsos, Qian Li, P J Hastings, Weiwei Dang, Kaifu Chen, Grzegorz Ira
Yeast EndoG prevents genome instability by degrading cytoplasmic DNA. Research square (2024)
Grzegorz Ira, Yang Yu, Xin Wang, Jordan Fox, Ruofan Yu, Brenna McCauley, Nicolas Nikoloutsos, Qian Li, Philip Hastings, Weiwei Dang, Kaifu Chen, Pilendra Thakre
Yeast EndoG prevents genome instability by degrading cytoplasmic DNA. Research square (2024)
Grzegorz Ira, Yang Yu, Xin Wang, Jordan Fox, Ruofan Yu, Brenna McCauley, Nicolas Nikoloutsos, Qian Li, Philip Hastings, Weiwei Dang, Kaifu Chen, Pilendra Thakre
Yeast EndoG prevents genome instability by degrading cytoplasmic DNA. Research square (2024)
Yang Yu, Xin Wang, Jordan Fox, Ruofan Yu, Pilendra Thakre, Brenna McCauley, Nicolas Nikoloutsos, Yang Yu, Qian Li, P J Hastings, Weiwei Dang, Kaifu Chen, Grzegorz Ira
Yeast EndoG prevents genome instability by degrading extranuclear DNA species. Nature communications 15 (1) (2024)
Olivia Weeks, Xinlei Gao, Sandeep Basu, Jennifer Galdieri, Kaifu Chen, Charles Geoffrey Burns, Caroline E Burns
Embryonic alcohol exposure in zebrafish predisposes adults to cardiomyopathy and diastolic dysfunction. Cardiovascular research (2024)
Yunzhou Dong, Beibei Wang, Mulong Du, Bo Zhu, Kui Cui, Kathryn Li, Ke Yuan, Douglas B Cowan, Sudarshan Bhattacharjee, Scott Wong, Jin-Jun Shi, Da-Zhi Wang, Kaifu Chen, Joyce Bischoff, MacRae F Linton, Hong Chen
Targeting Epsins to Inhibit Fibroblast Growth Factor Signaling While Potentiating Transforming Growth Factor-β Signaling Constrains Endothelial-to-Mesenchymal Transition in Atherosclerosis. Circulation (2023)
Jie Lv, Shu Meng, Qilin Gu, Rongbin Zheng, Xinlei Gao, Jun-Dae Kim, Min Chen, Bo Xia, Yihan Zuo, Sen Zhu, Dongyu Zhao, Yanqiang Li, Guangyu Wang, Xin Wang, Qingshu Meng, Qi Cao, John P Cooke, Longhou Fang, Kaifu Chen, Lili Zhang
Epigenetic landscape reveals MECOM as an endothelial lineage regulator. Nature communications 14 (1) (2023)
Farnaz Shamsi, Rongbin Zheng, Li-Lun Ho, Kaifu Chen, Yu-Hua Tseng
Comprehensive analysis of intercellular communication in the thermogenic adipose niche. Communications biology 6 (1) (2023)
Jie Lv, Shu Meng, Qilin Gu, Rongbin Zheng, Xinlei Gao, Jun-Dae Kim, Min Chen, Bo Xia, Yihan Zuo, Sen Zhu, Dongyu Zhao, Yanqiang Li, Guangyu Wang, Xin Wang, Qingshu Meng, Qi Cao, John P Cooke, Longhou Fang, Kaifu Chen, Lili Zhang
Publisher Correction: Epigenetic landscape reveals MECOM as an endothelial lineage regulator. Nature communications 14 (1) (2023)
Sana Nasim, Jill Wylie-Sears, Xinlei Gao, Qianman Peng, Bo Zhu, Kaifu Chen, Hong Chen, Joyce Bischoff
CD45 Is Sufficient to Initiate Endothelial-to-Mesenchymal Transition in Human Endothelial Cells. Arteriosclerosis, thrombosis, and vascular biology (2023)
Abhishek Shankar, Yanming Li, Chen Zhang, Yang Li, Kimberly R Rebello, Shengyu Li, Samantha Xu, Hernan G Vasquez, Lin Zhang, Wei Luo, Guangyu Wang, Kaifu Chen, Joseph Stapleton Coselli, Scott A LeMaire, Ying H Shen
Epigenetic Induction of Smooth Muscle Cell Phenotypic Alterations in Aortic Aneurysms and Dissections. Circulation (2023)
Jie Lv, Shu Meng, Qilin Gu, Rongbin Zheng, Xinlei Gao, Jun-Dae Kim, Min Chen, Bo Xia, Yihan Zuo, Sen Zhu, Dongyu Zhao, Yanqiang Li, Guangyu Wang, Xin Wang, Qingshu Meng, Qi Cao, John P Cooke, Longhou Fang, Kaifu Chen, Lili Zhang
Epigenetic landscape reveals MECOM as an endothelial lineage regulator. Nature communications 14 (1) (2023)
Jie Lv, Shu Meng, Qilin Gu, Rongbin Zheng, Xinlei Gao, Jun-Dae Kim, Min Chen, Bo Xia, Yihan Zuo, Sen Zhu, Dongyu Zhao, Yanqiang Li, Guangyu Wang, Xin Wang, Qingshu Meng, Qi Cao, John P Cooke, Longhou Fang, Kaifu Chen, Lili Zhang
Epigenetic landscape reveals MECOM as an endothelial lineage regulator. Nature communications 14 (1) (2023)
Jie Lv, Shu Meng, Qilin Gu, Rongbin Zheng, Xinlei Gao, Jun-Dae Kim, Min Chen, Bo Xia, Yihan Zuo, Sen Zhu, Dongyu Zhao, Yanqiang Li, Guangyu Wang, Xin Wang, Qingshu Meng, Qi Cao, John P Cooke, Longhou Fang, Kaifu Chen, Lili Zhang
Publisher Correction: Epigenetic landscape reveals MECOM as an endothelial lineage regulator. Nature communications 14 (1) (2023)
Xinlei Gao, Yang Yi, Jie Lv, Yanqiang Li, Kulandaisamy Arulsamy, Sahana Suresh Babu, Ivone Bruno, Lili Zhang, Qi Cao, Kaifu Chen
Low RNA stability signifies strong expression regulatability of tumor suppressors. Nucleic acids research (2023)
Yunzhou Dong, Beibei Wang, Mulong Du, Bo Zhu, Kui Cui, Kathryn Li, Ke Yuan, Douglas B Cowan, Sudarshan Bhattacharjee, Scott Wong, Jin-Jun Shi, Da-Zhi Wang, Kaifu Chen, Joyce Bischoff, MacRae F Linton, Hong Chen
Targeting Epsins to Inhibit Fibroblast Growth Factor Signaling While Potentiating Transforming Growth Factor-β Signaling Constrains Endothelial-to-Mesenchymal Transition in Atherosclerosis. Circulation (2023)
Jie Lv, Shu Meng, Qilin Gu, Rongbin Zheng, Xinlei Gao, Jun-Dae Kim, Min Chen, Bo Xia, Yihan Zuo, Sen Zhu, Dongyu Zhao, Yanqiang Li, Guangyu Wang, Xin Wang, Qingshu Meng, Qi Cao, John P Cooke, Longhou Fang, Kaifu Chen, Lili Zhang
Epigenetic landscape reveals MECOM as an endothelial lineage regulator. Nature communications 14 (1) (2023)
Yanqiang Li, Yang Yi, Jie Lv, Xinlei Gao, Yang Yu, Sahana Suresh Babu, Ivone Bruno, Dongyu Zhao, Bo Xia, Weiqun Peng, Jun Zhu, Hong Chen, Lili Zhang, Qi Cao, Kaifu Chen
Low RNA stability signifies increased post-transcriptional regulation of cell identity genes. Nucleic acids research (2023)
Yanqiang Li, Yang Yi, Jie Lv, Xinlei Gao, Yang Yu, Sahana Suresh Babu, Ivone Bruno, Dongyu Zhao, Bo Xia, Weiqun Peng, Jun Zhu, Hong Chen, Lili Zhang, Qi Cao, Kaifu Chen
Low RNA stability signifies increased post-transcriptional regulation of cell identity genes. Nucleic acids research (2023)
Jie Lv, Shu Meng, Qilin Gu, Rongbin Zheng, Xinlei Gao, Jun-Dae Kim, Min Chen, Bo Xia, Yihan Zuo, Sen Zhu, Dongyu Zhao, Yanqiang Li, Guangyu Wang, Xin Wang, Qingshu Meng, Qi Cao, John P Cooke, Longhou Fang, Kaifu Chen, Lili Zhang
Publisher Correction: Epigenetic landscape reveals MECOM as an endothelial lineage regulator. Nature communications 14 (1) (2023)
Yunzhou Dong, Beibei Wang, Mulong Du, Bo Zhu, Kui Cui, Kathryn Li, Ke Yuan, Douglas B Cowan, Sudarshan Bhattacharjee, Scott Wong, Jin-Jun Shi, Da-Zhi Wang, Kaifu Chen, Joyce Bischoff, MacRae F Linton, Hong Chen
Targeting Epsins to Inhibit Fibroblast Growth Factor Signaling While Potentiating Transforming Growth Factor-β Signaling Constrains Endothelial-to-Mesenchymal Transition in Atherosclerosis. Circulation (2023)
Jie Lv, Shu Meng, Qilin Gu, Rongbin Zheng, Xinlei Gao, Jun-Dae Kim, Min Chen, Bo Xia, Yihan Zuo, Sen Zhu, Dongyu Zhao, Yanqiang Li, Guangyu Wang, Xin Wang, Qingshu Meng, Qi Cao, John P Cooke, Longhou Fang, Kaifu Chen, Lili Zhang
Epigenetic landscape reveals MECOM as an endothelial lineage regulator. Nature communications 14 (1) (2023)
Krishan Gupta, Guangyu Wang, Shuo Zhang, Xinlei Gao, Rongbin Zheng, Yanchun Zhang, Qingshu Meng, Lili Zhang, Qi Cao, Kaifu Chen
StripeDiff: Model-based algorithm for differential analysis of chromatin stripe. Science advances 8 (49) (2022)
Xiaolei Liu, Kui Cui, Hao Wu, Kathryn S Li, Qianman Peng, Donghai Wang, Douglas B Cowan, J Brandon Dixon, R Sathish Srinivasan, Diane R Bielenberg, Kaifu Chen, Da-Zhi Wang, Yabing Chen, Hong Chen
Promoting Lymphangiogenesis and Lymphatic Growth and Remodeling to Treat Cardiovascular and Metabolic Diseases. Arteriosclerosis, thrombosis, and vascular biology (2022)
Kui Cui, Xinlei Gao, Beibei Wang, Hao Wu, Kulandaisamy Arulsamy, Yunzhou Dong, Yuling Xiao, Xingya Jiang, Marina V Malovichko, Kathryn Li, Qianman Peng, Yao Wei Lu, Bo Zhu, Rongbin Zheng, Scott Wong, Douglas B Cowan, MacRae F Linton, Sanjay Srivastava, Jin-Jun Shi, Kaifu Chen, Hong Chen
Epsin Nanotherapy Regulates Cholesterol Transport to Fortify Atheroma Regression. Circulation research (2022)
Yang Yi, Yanqiang Li, Chao Li, Longxiang Wu, Dongyu Zhao, Fuxi Li, Ladan Fazli, Rui Wang, Long Wang, Xuesen Dong, Wei Zhao, Kaifu Chen, Qi Cao
Methylation-dependent and -independent roles of EZH2 synergize in CDCA8 activation in prostate cancer. Oncogene 41 (11) (2022)
Dongyu Zhao, Min Zhang, Shaodong Huang, Qi Liu, Sen Zhu, Yanqiang Li, Weihua Jiang, Daniel L Kiss, Qi Cao, Lili Zhang, Kaifu Chen
CHD6 promotes broad nucleosome eviction for transcriptional activation in prostate cancer cells. Nucleic acids research (2022)
Yang Yi, Yanqiang Li, Qingshu Meng, Qiaqia Li, Fuxi Li, Bing Lu, Jiangchuan Shen, Ladan Fazli, Dongyu Zhao, Chao Li, Weihua Jiang, Rui Wang, Qipeng Liu, Aileen Szczepanski, Qianru Li, Wei Qin, Adam B Weiner, Tamara L Lotan, Zhe Ji, Sundeep Kalantry, Lu Wang, Edward M Schaeffer, Hengyao Niu, Xuesen Dong, Wei Zhao, Kaifu Chen, Qi Cao
A PRC2-independent function for EZH2 in regulating rRNA 2'-O methylation and IRES-dependent translation. Nature cell biology 23 (4) (2021)
Qiaqia Li, Kilia Y Liu, Qipeng Liu, Guangyu Wang, Weihua Jiang, Qingshu Meng, Yang Yi, Yongyong Yang, Rui Wang, Sen Zhu, Chao Li, Longxiang Wu, Dongyu Zhao, Lin Yan, Lili Zhang, Jung-Sun Kim, Xiongbing Zu, Anthony J Kozielski, Wei Qian, Jenny C Chang, Akash Patnaik, Kaifu Chen, Qi Cao
Antihistamine Drug Ebastine Inhibits Cancer Growth by Targeting Polycomb Group Protein EZH2. Molecular cancer therapeutics 19 (10) (2020)
Bo Xia, Dongyu Zhao, Guangyu Wang, Min Zhang, Jie Lv, Alin S Tomoiaga, Yanqiang Li, Xin Wang, Shu Meng, John P Cooke, Qi Cao, Lili Zhang, Kaifu Chen
Machine learning uncovers cell identity regulator by histone code. Nature communications 11 (1) (2020)
Dongyu Zhao, Lili Zhang, Min Zhang, Bo Xia, Jie Lv, Xinlei Gao, Guangyu Wang, Qingshu Meng, Yang Yi, Sen Zhu, Alin S Tomoiaga, Min Gyu Lee, John P Cooke, Qi Cao, Kaifu Chen
Broad genic repression domains signify enhanced silencing of oncogenes. Nature communications 11 (1) (2020)
Qilin Gu, Xiaojie Yang, Jie Lv, Jiaxiong Zhang, Bo Xia, Jun-Dae Kim, Ruoyu Wang, Feng Xiong, Shu Meng, Thomas P Clements, Bhavna Tandon, Daniel S Wagner, Miguel F Diaz, Pamela L Wenzel, Yury I Miller, David Traver, John P Cooke, Wenbo Li, Leonard I Zon, Kaifu Chen, Yong-Ping Bai, Longhou Fang
AIBP-mediated cholesterol efflux instructs hematopoietic stem and progenitor cell fate. Science (New York, N.Y.) 363 (6431) (2019)
Sen Zhu, Dongyu Zhao, Chao Li, Qiaqia Li, Weihua Jiang, Qipeng Liu, Rui Wang, Ladan Fazli, Yinan Li, Lili Zhang, Yang Yi, Qingshu Meng, Wanyi Wang, Guangyu Wang, Min Zhang, Xiongbing Zu, Wei Zhao, Tuo Deng, Jindan Yu, Xuesen Dong, Kaifu Chen, Qi Cao
BMI1 is directly regulated by androgen receptor to promote castration-resistance in prostate cancer. Oncogene 39 (1) (2019)