Michael A Skinnider

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 31

Top Topics

Mass Spectrometry

Artificial Intelligence

Top Venues

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Michael A Skinnider, Matthieu Gautier, Alan Yue Yang Teo, Claudia Kathe, Thomas H Hutson, Achilleas Laskaratos, Alexandra de Coucy, Nicola Regazzi, Viviana Aureli, Nicholas D James, Bernard L Schneider, Michael V Sofroniew, Grégoire Courtine, Jocelyne Bloch, Mark A Anderson, Jordan W Squair, Grégoire Courtine
Single-cell and spatial atlases of spinal cord injury in the Tabulae Paralytica. Nature (2024)
Michael A Skinnider, Matthieu Gautier, Alan Yue Yang Teo, Claudia Kathe, Thomas H Hutson, Achilleas Laskaratos, Alexandra de Coucy, Nicola Regazzi, Viviana Aureli, Nicholas D James, Bernard L Schneider, Michael V Sofroniew, Grégoire Courtine, Jocelyne Bloch, Mark A Anderson, Jordan W Squair, Grégoire Courtine
Single-cell and spatial atlases of spinal cord injury in the Tabulae Paralytica. Nature 631 (8019) (2024)
Michael A Skinnider, Matthieu Gautier, Alan Yue Yang Teo, Claudia Kathe, Thomas H Hutson, Achilleas Laskaratos, Alexandra de Coucy, Nicola Regazzi, Viviana Aureli, Nicholas D James, Bernard L Schneider, Michael V Sofroniew, Grégoire Courtine, Jocelyne Bloch, Mark A Anderson, Jordan W Squair, Grégoire Courtine
Single-cell and spatial atlases of spinal cord injury in the Tabulae Paralytica. Nature 631 (8019) (2024)
Michael A Skinnider, Matthieu Gautier, Alan Yue Yang Teo, Claudia Kathe, Thomas H Hutson, Achilleas Laskaratos, Alexandra de Coucy, Nicola Regazzi, Viviana Aureli, Nicholas D James, Bernard L Schneider, Michael V Sofroniew, Grégoire Courtine, Jocelyne Bloch, Mark A Anderson, Jordan W Squair, Grégoire Courtine
Single-cell and spatial atlases of spinal cord injury in the Tabulae Paralytica. Nature (2024)
Michael A Skinnider
Spectrum of the past. Nature reviews. Chemistry (2024)
Michael A Skinnider, Matthieu Gautier, Alan Yue Yang Teo, Claudia Kathe, Thomas H Hutson, Achilleas Laskaratos, Alexandra de Coucy, Nicola Regazzi, Viviana Aureli, Nicholas D James, Bernard L Schneider, Michael V Sofroniew, Grégoire Courtine, Jocelyne Bloch, Mark A Anderson, Jordan W Squair, Grégoire Courtine
Single-cell and spatial atlases of spinal cord injury in the Tabulae Paralytica. Nature 631 (8019) (2024)
Michael A Skinnider, Mopelola O Akinlaja, Leonard J Foster
Mapping protein states and interactions across the tree of life with co-fractionation mass spectrometry. Nature communications 14 (1) (2023)
Sophie Stukas, Jennifer Cooper, Jasmine Gill, Nader Fallah, Michael A Skinnider, Lise Belanger, Leanna Ritchie, Angela Tsang, Kevin Dong, Femke Streijger, John Street, Scott Paquette, Tamir Ailon, Nicolas Dea, Raphaele Charest-Morin, Charles G Fisher, Christopher S Bailey, Sanjay Dhall, Jean-Marc Mac-Thiong, Jefferson R Wilson, Sean Christie, Marcel F Dvorak, Cheryl L Wellington, Brian K Kwon
Association of CSF and Serum Neurofilament Light and Glial Fibrillary Acidic Protein, Injury Severity, and Outcome in Spinal Cord Injury. Neurology 100 (12) (2023)
Sophie Stukas, Jennifer Cooper, Jasmine Gill, Nader Fallah, Michael A Skinnider, Lise Belanger, Leanna Ritchie, Angela Tsang, Kevin Dong, Femke Streijger, John Street, Scott Paquette, Tamir Ailon, Nicolas Dea, Raphaele Charest-Morin, Charles G Fisher, Christopher S Bailey, Sanjay Dhall, Jean-Marc Mac-Thiong, Jefferson R Wilson, Sean Christie, Marcel F Dvorak, Cheryl L Wellington, Brian K Kwon
Association of CSF and Serum Neurofilament Light and Glial Fibrillary Acidic Protein, Injury Severity, and Outcome in Spinal Cord Injury. Neurology 100 (12) (2023)
Michael A Skinnider, Mopelola O Akinlaja, Leonard J Foster
Mapping protein states and interactions across the tree of life with co-fractionation mass spectrometry. Nature communications 14 (1) (2023)
Michael W Mullowney, Katherine R Duncan, Somayah S Elsayed, Neha Garg, Justin Johan Jozias van der Hooft, Nathaniel I Martin, David Meijer, Barbara R Terlouw, Friederike Biermann, Kai Blin, Janani Durairaj, Marina Gorostiola González, Eric J N Helfrich, Florian Huber, Stefan Leopold-Messer, Kohulan Rajan, Tristan de Rond, Jeffrey A van Santen, Maria Sorokina, Marcy J Balunas, Mehdi A Beniddir, Doris A van Bergeijk, Laura M Carroll, Chase M Clark, Djork-Arné Clevert, Chris A Dejong, Chao Du, Scarlet Ferrinho, Francesca Grisoni, Albert Hofstetter, Willem Jespers, Olga V Kalinina, Satria A Kautsar, Hyun Woo Kim, Tiago F Leao, Joleen Masschelein, Evan R Rees, Raphael Reher, Daniel Reker, Philippe Schwaller, Marwin Segler, Michael A Skinnider, Allison S Walker, Egon L Wilighagen, Barbara Zdrazil, Nadine Ziemert, Rebecca J M Goss, Pierre Guyomard, Andrea Volkamer, William H Gerwick, Hyun Uk Kim, Daniel Krug, Gilles P van Wezel, Gerard van Westen, Anna Katharina Herta Hirsch, Roger G Linington, Serina L Robinson, Marnix H Medema
Artificial intelligence for natural product drug discovery. Nature reviews. Drug discovery (2023)
Michael A Skinnider, Sandrine A M Mérette, Daniel Pasin, Jason Rogalski, Leonard J Foster, Frank Scheuermeyer, Aaron M Shapiro
Identification of Emerging Novel Psychoactive Substances by Retrospective Analysis of Population-Scale Mass Spectrometry Data Sets. Analytical chemistry (2023)
Fei Wang, Daniel Pasin, Michael A Skinnider, Jaanus Liigand, Jan-Niklas Kleis, David Brown, Eponine Oler, Tanvir Sajed, Vasuk Gautam, Stephen Harrison, Russell Greiner, Leonard J Foster, Petur Weihe Dalsgaard, David Scott Wishart
Deep Learning-Enabled MS/MS Spectrum Prediction Facilitates Automated Identification Of Novel Psychoactive Substances. Analytical chemistry (2023)
Sophie Stukas, Jennifer Cooper, Jasmine Gill, Nader Fallah, Michael A Skinnider, Lise Belanger, Leanna Ritchie, Angela Tsang, Kevin Dong, Femke Streijger, John Street, Scott Paquette, Tamir Ailon, Nicolas Dea, Raphaele Charest-Morin, Charles G Fisher, Christopher S Bailey, Sanjay Dhall, Jean-Marc Mac-Thiong, Jefferson R Wilson, Sean Christie, Marcel F Dvorak, Cheryl L Wellington, Brian K Kwon
Association of CSF and Serum Neurofilament Light and Glial Fibrillary Acidic Protein, Injury Severity, and Outcome in Spinal Cord Injury. Neurology 100 (12) (2023)
Sophie Stukas, Jennifer Cooper, Jasmine Gill, Nader Fallah, Michael A Skinnider, Lise Belanger, Leanna Ritchie, Angela Tsang, Kevin Dong, Femke Streijger, John Street, Scott Paquette, Tamir Ailon, Nicolas Dea, Raphaele Charest-Morin, Charles G Fisher, Christopher S Bailey, Sanjay Dhall, Jean-Marc Mac-Thiong, Jefferson R Wilson, Sean Christie, Marcel F Dvorak, Cheryl L Wellington, Brian K Kwon
Association of CSF and Serum Neurofilament Light and Glial Fibrillary Acidic Protein, Injury Severity, and Outcome in Spinal Cord Injury. Neurology 100 (12) (2023)
Sophie Stukas, Jennifer Cooper, Jasmine Gill, Nader Fallah, Michael A Skinnider, Lise Belanger, Leanna Ritchie, Angela Tsang, Kevin Dong, Femke Streijger, John Street, Scott Paquette Frscs, Tamir Ailon, Nicolas Dea, Raphaele Charest-Morin, Charles G Fisher, Christopher S Bailey, Sanjay Dhall, Jean-Marc Mac-Thiong, Jefferson R Wilson, Sean Christie, Marcel F Dvorak, Cheryl L Wellington, Brian K Kwon
Association of CSF and Serum Neurofilament Light and Glial Fibrillary Acidic Protein, Injury Severity, and Outcome in Spinal Cord Injury. Neurology (2023)
Jordan W Squair, Marco Milano, Alexandra de Coucy, Matthieu Gautier, Michael A Skinnider, Nicholas D James, Newton Cho, Anna Lasne, Claudia Kathe, Thomas H Hutson, Steven Ceto, Laetitia Baud, Katia Galan, Viviana Aureli, Achilleas Laskaratos, Grégoire Courtine, Timothy J Deming, Richie E Kohman, Bernard L Schneider, Zhigang He, Jocelyne Bloch, Michael V Sofroniew, Grégoire Courtine, Mark A Anderson
Recovery of walking after paralysis by regenerating characterized neurons to their natural target region. Science (New York, N.Y.) 381 (6664) (2023)
Michael A Skinnider, Mopelola O Akinlaja, Leonard J Foster
Mapping protein states and interactions across the tree of life with co-fractionation mass spectrometry. Nature communications 14 (1) (2023)
Claudia Kathe, Michael A Skinnider, Thomas H Hutson, Nicola Regazzi, Matthieu Gautier, Robin Demesmaeker, Salif Komi, Steven Ceto, Nicholas D James, Newton Cho, Laetitia Baud, Katia Galan, Kaya J E Matson, Andreas Rowald, Kyungjin Kim, Ruijia Wang, Karen Minassian, John O Prior, Leonie Asboth, Grégoire Courtine, Stephanie P Lacour, Ariel J Levine, Fabien B Wagner, Jocelyne Bloch, Jordan W Squair, Grégoire Courtine
The neurons that restore walking after paralysis. Nature 611 (7936) (2022)
Jordan W Squair, Matthieu Gautier, Claudia Kathe, Mark A Anderson, Nicholas D James, Thomas H Hutson, Rémi Hudelle, Taha Qaiser, Kaya J E Matson, Grégoire Courtine, Ariel J Levine, Gioele La Manno, Michael A Skinnider, Grégoire Courtine
Confronting false discoveries in single-cell differential expression. Nature communications 12 (1) (2021)
Michael A Skinnider, Leonard J Foster
Meta-analysis defines principles for the design and analysis of co-fractionation mass spectrometry experiments. Nature methods 18 (7) (2021)
Michael A Skinnider, Jordan W Squair, Claudia Kathe, Mark A Anderson, Matthieu Gautier, Kaya J E Matson, Marco Milano, Thomas H Hutson, Quentin Barraud, Aaron A Phillips, Leonard J Foster, Gioele La Manno, Ariel J Levine, Grégoire Courtine
Cell type prioritization in single-cell data. Nature biotechnology 39 (1) (2020)
Michael A Skinnider, Chad W Johnston, Mathusan Gunabalasingam, Nishanth J Merwin, Agata M Kieliszek, Robyn J MacLellan, Haoxin Li, Michael R M Ranieri, Andrew L H Webster, My P T Cao, Annabelle Pfeifle, Norman Spencer, Q Huy To, Dan Peter Wallace, Chris A Dejong, Nathan A Magarvey
Comprehensive prediction of secondary metabolite structure and biological activity from microbial genome sequences. Nature communications 11 (1) (2020)
Michael A Skinnider, Jordan W Squair, Leonard J Foster
Evaluating measures of association for single-cell transcriptomics. Nature methods 16 (5) (2019)
Nishanth J Merwin, Walaa K Mousa, Chris A Dejong, Michael A Skinnider, Michael J Cannon, Haoxin Li, Keshav Dial, Mathusan Gunabalasingam, Chad Johnston, Nathan A Magarvey
DeepRiPP integrates multiomics data to automate discovery of novel ribosomally synthesized natural products. Proceedings of the National Academy of Sciences of the United States of America 117 (1) (2019)
Michael A Skinnider, David D W Twa, Jordan W Squair, Norman D Rosenblum, Christine D Lukac, null null
Predictors of sustained research involvement among MD/PhD programme graduates. Medical education 52 (5) (2018)
Michael A Skinnider, R Greg Stacey, Leonard J Foster
Genomic data integration systematically biases interactome mapping. PLoS computational biology 14 (10) (2018)
Jordan W Squair, Seth Tigchelaar, Kyung-Mee Moon, Jie Liu, Wolfram Tetzlaff, Brian K Kwon, Andrei V Krassioukov, Christopher R West, Leonard J Foster, Michael A Skinnider
Integrated systems analysis reveals conserved gene networks underlying response to spinal cord injury. eLife 7 (2018)
Michael A Skinnider, Nathan A Magarvey
Statistical reanalysis of natural products reveals increasing chemical diversity. Proceedings of the National Academy of Sciences of the United States of America 114 (31) (2017)
Chad W Johnston, Michael A Skinnider, Chris A Dejong, Philip N Rees, Gregory M Chen, Chelsea G Walker, Shawn French, Eric D Brown, János Bérdy, Dennis Y Liu, Nathan A Magarvey
Assembly and clustering of natural antibiotics guides target identification. Nature chemical biology 12 (4) (2016)
Michael A Skinnider, Chad W Johnston, Robyn E Edgar, Chris A Dejong, Nishanth J Merwin, Philip N Rees, Nathan A Magarvey
Genomic charting of ribosomally synthesized natural product chemical space facilitates targeted mining. Proceedings of the National Academy of Sciences of the United States of America 113 (42) (2016)