Egon L Wilighagen (Egon Willighagen, Egon L Willighagen)

ISNI Loop profile Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 68

Top Venues

Journal of cheminformatics

Scientific data

Nature methods

F1000Research

Maastricht University

Radboud Universiteit Nijmegen (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Maastricht University Feb 01 2014

Netherlands

Universitair Docent :: Department of Bioinformatics - BiGCaT

Maastricht University Jan 01 2012 - Jan 31 2014

Netherlands

post-doc :: Bioinformatics - BiGCaT

Education History

Radboud Universiteit Nijmegen Nov 01 2001 - Feb 02 2008

Netherlands

PHD :: Analytical Chemistry

Radboud Universiteit Nijmegen Sep 01 1993 - Mar 25 2002

Netherlands

MSC

Publications

Ammar Ammar, Chris T A Evelo, Egon L Wilighagen
FAIR assessment of nanosafety data reusability with community standards. Scientific data 11 (1) (2024)
Jeaphianne P M van Rijn, Marvin Martens, Ammar Ammar, Mihaela Roxana Cimpan, Valerie Fessard, Peter Hoet, Nina Jeliazkova, Sivakumar Murugadoss, Ivana Vinković Vrček, Egon L Wilighagen
From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials. Journal of cheminformatics 16 (1) (2024)
Nina Jeliazkova, Eleonora Longhin, Naouale El Yamani, Elise Rundén-Pran, Elisa Moschini, Tommaso Serchi, Ivana Vinković Vrček, Michael J Burgum, Shareen H Doak, Mihaela Roxana Cimpan, Ivan Rios-Mondragon, Emil Cimpan, Chiara L Battistelli, Cecilia Bossa, Rositsa Tsekovska, Damjana Drobne, Sara Novak, Neža Repar, Ammar Ammar, Penny Nymark, Veronica Di Battista, Anita Sosnowska, Tomasz Puzyn, Nikolay Kochev, Luchesar Iliev, Vedrin Jeliazkov, Katie Reilly, Iseult Lynch, Martine Bakker, Camila Delpivo, Araceli Sánchez Jiménez, Ana Sofia Fonseca, Nicolas Manier, María Luisa Fernández-Cruz, Shahzad Rashid, Egon L Wilighagen, Margarita D Apostolova, Maria Dusinska
A template wizard for the cocreation of machine-readable data-reporting to harmonize the evaluation of (nano)materials. Nature protocols (2024)
Ammar Ammar, Chris T A Evelo, Egon L Wilighagen
FAIR assessment of nanosafety data reusability with community standards. Scientific data 11 (1) (2024)
Jeaphianne P M van Rijn, Marvin Martens, Ammar Ammar, Mihaela Roxana Cimpan, Valerie Fessard, Peter Hoet, Nina Jeliazkova, Sivakumar Murugadoss, Ivana Vinković Vrček, Egon L Wilighagen
From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials. Journal of cheminformatics 16 (1) (2024)
Ammar Ammar, Chris T A Evelo, Egon L Wilighagen
FAIR assessment of nanosafety data reusability with community standards. Scientific data 11 (1) (2024)
Jeaphianne P M van Rijn, Marvin Martens, Ammar Ammar, Mihaela Roxana Cimpan, Valerie Fessard, Peter Hoet, Nina Jeliazkova, Sivakumar Murugadoss, Ivana Vinković Vrček, Egon L Wilighagen
From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials. Journal of cheminformatics 16 (1) (2024)
Ammar Ammar, Chris T A Evelo, Egon L Wilighagen
FAIR assessment of nanosafety data reusability with community standards. Scientific data 11 (1) (2024)
Ammar Ammar, Rachel Cavill, Chris T A Evelo, Egon L Wilighagen
PSnpBind-ML: predicting the effect of binding site mutations on protein-ligand binding affinity. Journal of cheminformatics 15 (1) (2023)
Ammar Ammar, Rachel Cavill, Chris T A Evelo, Egon L Wilighagen
PSnpBind-ML: predicting the effect of binding site mutations on protein-ligand binding affinity. Journal of cheminformatics 15 (1) (2023)
Andra Waagmeester, Egon L Wilighagen, Andrew I Su, Martina Kutmon, Jose Emilio Labra Gayo, Daniel Fernández-Álvarez, Quentin J Groom, Peter J Schaap, Lisa M Verhagen, Jasper J Koehorst
Author Correction: A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses. BMC biology 21 (1) (2023)
Ammar Ammar, Rachel Cavill, Chris T A Evelo, Egon L Wilighagen
PSnpBind-ML: predicting the effect of binding site mutations on protein-ligand binding affinity. Journal of cheminformatics 15 (1) (2023)
Philippe Rocca-Serra, Wei Gu, Vassilios Ioannidis, Tooba Abbassi-Daloii, Salvador Capella, Ishwar Chandramouliswaran, Andrea Splendiani, Tony Burdett, Robert T Giessmann, David Henderson, Dominique Batista, Ibrahim Emam, Yojana Gadiya, Lucas Giovanni, Egon L Wilighagen, Chris T A Evelo, Alasdair J G Gray, Philip Gribbon, Nick Juty, Danielle Welter, Karsten Quast, Paul Peeters, Tom Plasterer, Colin Wood, Eelke van der Horst, Dorothy S Reilly, Herman W T van Vlijmen, Serena Scollen, Allyson L Lister, Milo Thurston, Ramon Granell, null null, Susanna-Assunta Sansone
The FAIR Cookbook - the essential resource for and by FAIR doers. Scientific data 10 (1) (2023)
Ayushi Agrawal, Hasan Balcı, Kristina Hanspers, Susan L M Coort, Marvin Martens, Denise N Slenter, Friederike Ehrhart, Daniela Digles, Andra Waagmeester, Isabel Wassink, Tooba Abbassi-Daloii, Elisson N Lopes, Aishwarya Iyer, Javier Millán Acosta, Lars G Willighagen, Kozo Nishida, Anders Riutta, Helena Basaric, Chris T A Evelo, Egon L Wilighagen, Martina Kutmon, Alexander R Pico
WikiPathways 2024: next generation pathway database. Nucleic acids research (2023)
Ammar Ammar, Rachel Cavill, Chris T A Evelo, Egon L Wilighagen
PSnpBind-ML: predicting the effect of binding site mutations on protein-ligand binding affinity. Journal of cheminformatics 15 (1) (2023)
Michael W Mullowney, Katherine R Duncan, Somayah S Elsayed, Neha Garg, Justin Johan Jozias van der Hooft, Nathaniel I Martin, David Meijer, Barbara R Terlouw, Friederike Biermann, Kai Blin, Janani Durairaj, Marina Gorostiola González, Eric J N Helfrich, Florian Huber, Stefan Leopold-Messer, Kohulan Rajan, Tristan de Rond, Jeffrey A van Santen, Maria Sorokina, Marcy J Balunas, Mehdi A Beniddir, Doris A van Bergeijk, Laura M Carroll, Chase M Clark, Djork-Arné Clevert, Chris A Dejong, Chao Du, Scarlet Ferrinho, Francesca Grisoni, Albert Hofstetter, Willem Jespers, Olga V Kalinina, Satria A Kautsar, Hyun Woo Kim, Tiago F Leao, Joleen Masschelein, Evan R Rees, Raphael Reher, Daniel Reker, Philippe Schwaller, Marwin Segler, Michael A Skinnider, Allison S Walker, Egon L Wilighagen, Barbara Zdrazil, Nadine Ziemert, Rebecca J M Goss, Pierre Guyomard, Andrea Volkamer, William H Gerwick, Hyun Uk Kim, Daniel Krug, Gilles P van Wezel, Gerard van Westen, Anna Katharina Herta Hirsch, Roger G Linington, Serina L Robinson, Marnix H Medema
Artificial intelligence for natural product drug discovery. Nature reviews. Drug discovery (2023)
Marvin Martens, Rob Stierum, Emma L Schymanski, Chris T A Evelo, Reza Aalizadeh, Hristo Aladjov, Katarzyna Arturi, Karine Audouze, Pavel Babica, Karel Berka, Jos Bessems, Ludek Blaha, Evan E Bolton, Montserrat Cases, Dimitrios E Damalas, Kirtan Dave, Marco Dilger, Thomas Exner, Daan P Geerke, Roland Grafström, Alasdair Gray, John M Hancock, Henner Hollert, Nina Jeliazkova, Danyel G J Jennen, Fabien Jourdan, Pascal Kahlem, Jana Klanova, Jos Kleinjans, Todor Kondic, Boï Kone, Iseult Lynch, Uko Maran, Sergio Martinez Cuesta, Hervé Ménager, Steffen Neumann, Penny Nymark, Herbert Oberacher, Noelia Ramirez, Sylvie Remy, Philippe Rocca-Serra, Reza M Salek, Brett Sallach, Susanna-Assunta Sansone, Ferran Sanz, Haralambos Sarimveis, Sirarat Sarntivijai, Tobias Schulze, Jaroslav Slobodnik, Ola Spjuth, Jonathan Tedds, Nikolaos Thomaidis, Ralf J M Weber, Gerard van Westen, Craig E Wheelock, Antony J Williams, Hilda Witters, Barbara Zdrazil, Anze Zupanic, Egon L Wilighagen
ELIXIR and Toxicology: a community in development. F1000Research 10 (2023)
Philippe Rocca-Serra, Wei Gu, Vassilios Ioannidis, Tooba Abbassi-Daloii, Salvador Capella, Ishwar Chandramouliswaran, Andrea Splendiani, Tony Burdett, Robert T Giessmann, David Henderson, Dominique Batista, Ibrahim Emam, Yojana Gadiya, Lucas Giovanni, Egon L Wilighagen, Chris T A Evelo, Alasdair J G Gray, Philip Gribbon, Nick Juty, Danielle Welter, Karsten Quast, Paul Peeters, Tom Plasterer, Colin Wood, Eelke van der Horst, Dorothy S Reilly, Herman W T van Vlijmen, Serena Scollen, Allyson L Lister, Milo Thurston, Ramon Granell, null null, Susanna-Assunta Sansone
The FAIR Cookbook - the essential resource for and by FAIR doers. Scientific data 10 (1) (2023)
Philippe Rocca-Serra, Wei Gu, Vassilios Ioannidis, Tooba Abbassi-Daloii, Salvador Capella, Ishwar Chandramouliswaran, Andrea Splendiani, Tony Burdett, Robert T Giessmann, David Henderson, Dominique Batista, Ibrahim Emam, Yojana Gadiya, Lucas Giovanni, Egon L Wilighagen, Chris T A Evelo, Alasdair J G Gray, Philip Gribbon, Nick Juty, Danielle Welter, Karsten Quast, Paul Peeters, Tom Plasterer, Colin Wood, Eelke van der Horst, Dorothy S Reilly, Herman W T van Vlijmen, Serena Scollen, Allyson L Lister, Milo Thurston, Ramon Granell, null null, Susanna-Assunta Sansone
The FAIR Cookbook - the essential resource for and by FAIR doers. Scientific data 10 (1) (2023)
Zhixu Ni, Michele Wölk, Geoff Jukes, Karla Mendivelso Espinosa, Robert Ahrends, Lucila Aimo, Jorge Álvarez-Jarreta, Simon R Andrews, Robert Andrews, Alan Bridge, Geremy C Clair, Matthew J Conroy, Eoin Fahy, Caroline Gaud, Laura Goracci, Jürgen Hartler, Nils Hoffmann, Dominik Kopczyinki, Ansgar Korf, Andrea F Lopez-Clavijo, Adnan Malik, Jacobo Miranda Ackerman, Martijn R Molenaar, Claire O'Donovan, Tomáš Pluskal, Andrej Shevchenko, Denise N Slenter, Gary E Siuzdak, Martina Kutmon, Hiroshi Tsugawa, Egon L Wilighagen, Jianguo Xia, Valerie B O'Donnell, Maria Fedorova
Guiding the choice of informatics software and tools for lipidomics research applications. Nature methods 20 (2) (2022)
Zhixu Ni, Michele Wölk, Geoff Jukes, Karla Mendivelso Espinosa, Robert Ahrends, Lucila Aimo, Jorge Álvarez-Jarreta, Simon R Andrews, Robert Andrews, Alan Bridge, Geremy C Clair, Matthew J Conroy, Eoin Fahy, Caroline Gaud, Laura Goracci, Jürgen Hartler, Nils Hoffmann, Dominik Kopczyinki, Ansgar Korf, Andrea F Lopez-Clavijo, Adnan Malik, Jacobo Miranda Ackerman, Martijn R Molenaar, Claire O'Donovan, Tomáš Pluskal, Andrej Shevchenko, Denise N Slenter, Gary E Siuzdak, Martina Kutmon, Hiroshi Tsugawa, Egon L Wilighagen, Jianguo Xia, Valerie B O'Donnell, Maria Fedorova
Guiding the choice of informatics software and tools for lipidomics research applications. Nature methods 20 (2) (2022)
Zhixu Ni, Michele Wölk, Geoff Jukes, Karla Mendivelso Espinosa, Robert Ahrends, Lucila Aimo, Jorge Álvarez-Jarreta, Simon R Andrews, Robert Andrews, Alan Bridge, Geremy C Clair, Matthew J Conroy, Eoin Fahy, Caroline Gaud, Laura Goracci, Jürgen Hartler, Nils Hoffmann, Dominik Kopczyinki, Ansgar Korf, Andrea F Lopez-Clavijo, Adnan Malik, Jacobo Miranda Ackerman, Martijn R Molenaar, Claire O'Donovan, Tomáš Pluskal, Andrej Shevchenko, Denise N Slenter, Gary E Siuzdak, Martina Kutmon, Hiroshi Tsugawa, Egon L Wilighagen, Jianguo Xia, Valerie B O'Donnell, Maria Fedorova
Guiding the choice of informatics software and tools for lipidomics research applications. Nature methods 20 (2) (2022)
Zhixu Ni, Michele Wölk, Geoff Jukes, Karla Mendivelso Espinosa, Robert Ahrends, Lucila Aimo, Jorge Álvarez-Jarreta, Simon R Andrews, Robert Andrews, Alan Bridge, Geremy C Clair, Matthew J Conroy, Eoin Fahy, Caroline Gaud, Laura Goracci, Jürgen Hartler, Nils Hoffmann, Dominik Kopczyinki, Ansgar Korf, Andrea F Lopez-Clavijo, Adnan Malik, Jacobo Miranda Ackerman, Martijn R Molenaar, Claire O'Donovan, Tomáš Pluskal, Andrej Shevchenko, Denise N Slenter, Gary E Siuzdak, Martina Kutmon, Hiroshi Tsugawa, Egon L Wilighagen, Jianguo Xia, Valerie B O'Donnell, Maria Fedorova
Guiding the choice of informatics software and tools for lipidomics research applications. Nature methods (2022)
Gabriel Sinclair, Inthirany Thillainadarajah, Brian Meyer, Vicente Samano, Sakuntala Sivasupramaniam, Linda Adams, Egon L Wilighagen, Ann M Richard, Martin Walker, Antony J Williams
Wikipedia on the CompTox Chemicals Dashboard: Connecting Resources to Enrich Public Chemical Data. Journal of chemical information and modeling 62 (20) (2022)
Hiba Mohammed Taha, Reza Aalizadeh, Nikiforos A Alygizakis, Jean-Philippe Antignac, Hans Peter H Arp, Richard Bade, Nancy C Baker, Lidia Belova, Lubertus Bijlsma, Evan E Bolton, Werner Brack, Alberto Celma, Wen-Ling Chen, Tiejun Cheng, Parviel Chirsir, Ľuboš Čirka, Lisa A D'Agostino, Yannick Djoumbou Feunang, Valeria Dulio, Stellan Fischer, Pablo Gago-Ferrero, Aikaterini Galani, Birgit Geueke, Natalia Głowacka, Juliane Glüge, Ksenia J Groh, Sylvia Grosse, Peter Haglund, Pertti J Hakkinen, Sarah E Hale, Félix Hernandez, Elisabeth M L Janssen, Tim J H Jonkers, Karin Kiefer, Michal Kirchner, Jan Koschorreck, Martin Krauss, Jessy Krier, Marja H Lamoree, Marion Letzel, Thomas Letzel, Qingliang Li, James Little, Yanna Liu, David M Lunderberg, Jonathan W Martin, Andrew D McEachran, John A McLean, Christiane Meier, Jeroen Meijer, Frank Menger, Carla Merino, Jane Muncke, Matthias Muschket, Michael Neumann, Vanessa Neveu, Kelsey Ng, Herbert Oberacher, Jake William O'Brien, Peter Oswald, Martina Oswaldova, Jaqueline A Picache, Cristina Postigo, Noelia Ramírez, Thorsten Reemtsma, Justin B Renaud, Pawel Rostkowski, Heinz Rüdel, Reza M Salek, Saer Samanipour, Martin Scheringer, Ivo Schliebner, Wolfgang Schulz, Tobias Schulze, Manfred Sengl, Benjamin A Shoemaker, Kerry Sims, Heinz P Singer, Randolph Reyes Singh, Mark W Sumarah, Paul A Thiessen, Kevin V Thomas, Sònia Torres, Xenia Trier, Annemarie P van Wezel, Roel C H Vermeulen, Jelle J Vlaanderen, Peter Carsten von der Ohe, Zhanyun Wang, Antony J Williams, Egon L Wilighagen, David Scott Wishart, Jian Zhang, Νikolaos S Τhomaidis, Juliane Hollender, Jaroslav Slobodnik, Emma L Schymanski
The NORMAN Suspect List Exchange (NORMAN-SLE): facilitating European and worldwide collaboration on suspect screening in high resolution mass spectrometry. Environmental sciences Europe 34 (1) (2022)
Zhixu Ni, Michele Wölk, Geoff Jukes, Karla Mendivelso Espinosa, Robert Ahrends, Lucila Aimo, Jorge Álvarez-Jarreta, Simon R Andrews, Robert Andrews, Alan Bridge, Geremy C Clair, Matthew J Conroy, Eoin Fahy, Caroline Gaud, Laura Goracci, Jürgen Hartler, Nils Hoffmann, Dominik Kopczyinki, Ansgar Korf, Andrea F Lopez-Clavijo, Adnan Malik, Jacobo Miranda Ackerman, Martijn R Molenaar, Claire O'Donovan, Tomáš Pluskal, Andrej Shevchenko, Denise N Slenter, Gary E Siuzdak, Martina Kutmon, Hiroshi Tsugawa, Egon L Wilighagen, Jianguo Xia, Valerie B O'Donnell, Maria Fedorova
Guiding the choice of informatics software and tools for lipidomics research applications. Nature methods (2022)
Zhixu Ni, Michele Wölk, Geoff Jukes, Karla Mendivelso Espinosa, Robert Ahrends, Lucila Aimo, Jorge Álvarez-Jarreta, Simon R Andrews, Robert Andrews, Alan Bridge, Geremy C Clair, Matthew J Conroy, Eoin Fahy, Caroline Gaud, Laura Goracci, Jürgen Hartler, Nils Hoffmann, Dominik Kopczyinki, Ansgar Korf, Andrea F Lopez-Clavijo, Adnan Malik, Jacobo Miranda Ackerman, Martijn R Molenaar, Claire O'Donovan, Tomáš Pluskal, Andrej Shevchenko, Denise N Slenter, Gary E Siuzdak, Martina Kutmon, Hiroshi Tsugawa, Egon L Wilighagen, Jianguo Xia, Valerie B O'Donnell, Maria Fedorova
Guiding the choice of informatics software and tools for lipidomics research applications. Nature methods 20 (2) (2022)
Jeaphianne P M van Rijn, Antreas Afantitis, Mustafa Culha, Maria Dusinska, Thomas E Exner, Nina Jeliazkova, Eleonora Marta Longhin, Iseult Lynch, Georgia Melagraki, Penny Nymark, Anastasios G Papadiamantis, David A Winkler, Hulya Yilmaz, Egon L Wilighagen
European Registry of Materials: global, unique identifiers for (undisclosed) nanomaterials. Journal of cheminformatics 14 (1) (2022)
Zhixu Ni, Michele Wölk, Geoff Jukes, Karla Mendivelso Espinosa, Robert Ahrends, Lucila Aimo, Jorge Álvarez-Jarreta, Simon R Andrews, Robert Andrews, Alan Bridge, Geremy C Clair, Matthew J Conroy, Eoin Fahy, Caroline Gaud, Laura Goracci, Jürgen Hartler, Nils Hoffmann, Dominik Kopczyinki, Ansgar Korf, Andrea F Lopez-Clavijo, Adnan Malik, Jacobo Miranda Ackerman, Martijn R Molenaar, Claire O'Donovan, Tomáš Pluskal, Andrej Shevchenko, Denise N Slenter, Gary E Siuzdak, Martina Kutmon, Hiroshi Tsugawa, Egon L Wilighagen, Jianguo Xia, Valerie B O'Donnell, Maria Fedorova
Guiding the choice of informatics software and tools for lipidomics research applications. Nature methods (2022)
Ammar Ammar, Rachel Cavill, Chris T A Evelo, Egon L Wilighagen
PSnpBind: a database of mutated binding site protein-ligand complexes constructed using a multithreaded virtual screening workflow. Journal of cheminformatics 14 (1) (2022)
Ryan A Miller, Martina Kutmon, Anwesha Bohler, Andra Waagmeester, Chris T Evelo, Egon L Wilighagen
Understanding signaling and metabolic paths using semantified and harmonized information about biological interactions. PloS one 17 (4) (2022)
Charles Tapley Hoyt, Meghan A Balk, Tiffany J Callahan, Daniel Domingo-Fernández, Melissa A Haendel, Harshad B Hegde, Daniel Scott Himmelstein, Klas Karis, John Kunze, Tiago Lubiana, Nicolas Matentzoglu, Julie McMurry, Sierra Moxon, Christopher J Mungall, Adriano Rutz, Deepak R Unni, Egon L Wilighagen, Donald Winston, Benjamin M Gyori
Unifying the identification of biomedical entities with the Bioregistry. Scientific data 9 (1) (2022)
Adriano Rutz, Maria Sorokina, Jakub Galgonek, Daniel Mietchen, Egon L Wilighagen, Arnaud Gaudry, James G Graham, Ralf Stephan, Roderic M P Page, Jiri Vondrasek, Christoph Steinbeck, Guido F Pauli, Jean-Luc Wolfender, Jonathan Bisson, Pierre-Marie Allard
The LOTUS initiative for open knowledge management in natural products research. eLife 11 (2022)
Andrea Jacobs, Dustin Williams, Katherine Hickey, Nathan Patrick, Antony J Williams, Stuart J Chalk, Leah R McEwen, Egon L Wilighagen, Martin Walker, Evan Bolton, Gabriel Sinclair, Adam Sanford
CAS Common Chemistry in 2021: Expanding Access to Trusted Chemical Information for the Scientific Community. Journal of chemical information and modeling 62 (11) (2022)
Zhixu Ni, Michele Wölk, Geoff Jukes, Karla Mendivelso Espinosa, Robert Ahrends, Lucila Aimo, Jorge Álvarez-Jarreta, Simon R Andrews, Robert Andrews, Alan Bridge, Geremy C Clair, Matthew J Conroy, Eoin Fahy, Caroline Gaud, Laura Goracci, Jürgen Hartler, Nils Hoffmann, Dominik Kopczyinki, Ansgar Korf, Andrea F Lopez-Clavijo, Adnan Malik, Jacobo Miranda Ackerman, Martijn R Molenaar, Claire O'Donovan, Tomáš Pluskal, Andrej Shevchenko, Denise N Slenter, Gary E Siuzdak, Martina Kutmon, Hiroshi Tsugawa, Egon L Wilighagen, Jianguo Xia, Valerie B O'Donnell, Maria Fedorova
Guiding the choice of informatics software and tools for lipidomics research applications. Nature methods 20 (2) (2022)
Marvin Martens, Chris T A Evelo, Egon L Wilighagen
Providing Adverse Outcome Pathways from the AOP-Wiki in a Semantic Web Format to Increase Usability and Accessibility of the Content. Applied in vitro toxicology 8 (1) (2022)
Andra Waagmeester, Egon L Wilighagen, Andrew I Su, Martina Kutmon, Jose Emilio Labra Gayo, Daniel Fernández-Álvarez, Quentin J Groom, Peter J Schaap, Lisa M Verhagen, Jasper J Koehorst
A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses. BMC biology 19 (1) (2021)
Birgit H M Meldal, Livia Perfetto, Colin Combe, Tiago Lubiana, João Vitor Ferreira Cavalcante, Hema Bye-A-Jee, Andra Waagmeester, Noemi Del-Toro, Anjali Shrivastava, Elisabeth Barrera, Edith Wong, Bernhard Mlecnik, Gabriela Bindea, Kalpana Panneerselvam, Egon L Wilighagen, Juri Rappsilber, Pablo Porras, Henning Hermjakob, Sandra E Orchard
Complex Portal 2022: new curation frontiers. Nucleic acids research (2021)
Friederike Ehrhart, Annika Jacobsen, Maria Rigau, Mattia Bosio, Rajaram Kaliyaperumal, Jeroen F J Laros, Egon L Wilighagen, Alfonso Valencia, Marco Roos, Salvador Capella, Leopold M G Curfs, Chris T A Evelo
A catalogue of 863 Rett-syndrome-causing MECP2 mutations and lessons learned from data integration. Scientific data 8 (1) (2021)
Jennifer E Kyle, Lucila Aimo, Alan J Bridge, Geremy C Clair, Maria S Fedorova, J Bernd Helms, Martijn R Molenaar, Zhixu Ni, Matej Oresic, Denise N Slenter, Egon L Wilighagen, Bobbie-Jo M Webb-Robertson
Interpreting the lipidome: bioinformatic approaches to embrace the complexity. Metabolomics : Official journal of the Metabolomic Society 17 (6) (2021)
Rajarashi Guha, Egon L Wilighagen, Barbara Zdrazil, Nina Jeliazkova
What is the role of cheminformatics in a pandemic? Journal of cheminformatics 13 (1) (2021)
Kristina Hanspers, Martina Kutmon, Susan L M Coort, Daniela Digles, Lauren J Dupuis, Friederike Ehrhart, Finterly Hu, Elisson N Lopes, Marvin Martens, Nhung Pham, Woosub Shin, Denise N Slenter, Andra Waagmeester, Egon L Wilighagen, Laurent A Winckers, Chris T A Evelo, Alexander R Pico
Ten simple rules for creating reusable pathway models for computational analysis and visualization. PLoS computational biology 17 (8) (2021)
Friederike Ehrhart, Egon L Wilighagen, Martina Kutmon, Max van Hoften, Leopold M G Curfs, Chris T A Evelo
A resource to explore the discovery of rare diseases and their causative genes. Scientific data 8 (1) (2021)
Rajarashi Guha, Nina Jeliazkova, Egon L Wilighagen, Barbara Zdrazil
Reply to "FAIR chemical structure in the Journal of Cheminformatics". Journal of cheminformatics 13 (1) (2021)
Laurent A Winckers, Chris T A Evelo, Egon L Wilighagen, Martina Kutmon
Investigating the Molecular Processes behind the Cell-Specific Toxicity Response to Titanium Dioxide Nanobelts. International journal of molecular sciences 22 (17) (2021)
Marek Ostaszewski, Anna Niarakis, Alexander Mazein, Inna Kuperstein, Robert D Phair, Aurelio Orta Resendiz, Vidisha Singh, Sara Sadat Aghamiri, Marcio Luis Acencio, Enrico Glaab, Andreas Ruepp, Gisela Fobo, Corinna Montrone, Barbara Brauner, Goar Frishman, Luis Cristóbal Monraz Gómez, Julia Somers, Matti Hoch, Shailendra Gupta, Julia Scheel, Hanna Borlinghaus, Tobias Czauderna, Falk Schreiber, Arnau Montagud, Miguel Ponce-de-Leon, Akira Funahashi, Yusuke Hiki, Noriko F Hiroi, Takahiro G Yamada, Andreas Dräger, Alina Renz, Muhammad Naveez, Zsolt Bocskei, Francesco Messina, Daniela Börnigen, Liam Fergusson, Marta Conti, Marius Rameil, Vanessa Nakonecnij, Jakob Vanhoefer, Leonard Schmiester, Muying Wang, Emily E Ackerman, Jason E Shoemaker, Jeremy D Zucker, Kristie L Oxford, Jeremy Teuton, Ebru Kocakaya, Gökçe Yağmur Summak, Kristina Hanspers, Martina Kutmon, Susan L M Coort, Lars M T Eijssen, Friederike Ehrhart, Devasahayam Arokiar Balaya Rex, Denise N Slenter, Marvin Martens, Nhung Pham, Robin Haw, Bijay Jassal, Lisa Matthews, Marija Orlic-Milacic, Andrea Senff Ribeiro, Karen Rothfels, Veronica Shamovsky, Ralf Stephan, Cristoffer Sevilla, Thawfeek Mohamed Varusai, Jean-Marie Ravel, Rupsha Fraser, Vera Ortseifen, Silvia Marchesi, Piotr Gawron, Ewa Smula, Laurent Heirendt, Venkata P Satagopam, Guanming Wu, Anders Riutta, Martin Golebiewski, Stuart Owen, Carole Goble, Xiaoming Hu, Rupert W Overall, Dieter Maier, Angela Bauch, Benjamin M Gyori, John A Bachman, Carlos Vega, Valentin Grouès, Miguel Vazquez, Pablo Porras, Luana Licata, Marta Iannuccelli, Francesca Sacco, Anastasia Nesterova, Anton Yuryev, Anita de Waard, Dénes Türei, Augustin Luna, Ozgun Babur, Sylvain Soliman, Alberto Valdeolivas, Marina Esteban-Medina, Maria Peña-Chilet, Kinza Rian, Tomas Helikar, Bhanwar Lal Puniya, Dezső Módos, Agatha Treveil, Márton Ölbei, Bertrand de Meulder, Stephane Ballereau, Aurélien J F Dugourd, Aurélien Naldi, Vincent Noël, Laurence Calzone, Chris Sander, Emek Demir, Tamas Korcsmaros, Tom C Freeman, Franck Augé, Jacques S Beckmann, Jan Hasenauer, Olaf Wolkenhauer, Egon L Wilighagen, Alexander R Pico, Chris T A Evelo, Marc E Gillespie, Lincoln D Stein, Henning Hermjakob, Peter D'Eustachio, Julio Saez-Rodriguez, Joaquín Dopazo, Alfonso Valencia, Hiroaki Kitano, Emmanuel Barillot, Charles Auffray, Rudi Balling, Reinhard Schneider, null null
COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms. Molecular systems biology 17 (10) (2021)
Andra Waagmeester, Gregory Stupp, Sebastian Burgstaller-Muehlbacher, Benjamin M Good, Malachi Griffith, Malachi Griffith, Kristina Hanspers, Henning Hermjakob, Toby S Hudson, Kevin Hybiske, Sarah M Keating, Magnus Manske, Michael D Mayers, Daniel Mietchen, Elvira Mitraka, Alexander R Pico, Timothy Putman, Anders Riutta, Núria Queralt-Rosinach, Lynn M Schriml, Thomas M A Shafee, Denise N Slenter, Ralf Stephan, Katherine Thornton, Ginger Tsueng, Roger Tu, Sabah Ul-Hasan, Egon L Wilighagen, Chunlei Wu, Andrew I Su
Wikidata as a knowledge graph for the life sciences. eLife 9 (2020)
Marek Ostaszewski, Alexander Mazein, Marc E Gillespie, Inna Kuperstein, Anna Niarakis, Henning Hermjakob, Alexander R Pico, Egon L Wilighagen, Chris T Evelo, Jan Hasenauer, Falk Schreiber, Andreas Dräger, Emek Demir, Olaf Wolkenhauer, Laura I Furlong, Emmanuel Barillot, Joaquín Dopazo, Aurelio Orta Resendiz, Francesco Messina, Alfonso Valencia, Akira Funahashi, Hiroaki Kitano, Charles Auffray, Rudi Balling, Reinhard Schneider
COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms. Scientific data 7 (1) (2020)
Egon L Wilighagen
Adoption of the Citation Typing Ontology by the Journal of Cheminformatics. Journal of cheminformatics 12 (1) (2020)
Marek Ostaszewski, Alexander Mazein, Marc E Gillespie, Inna Kuperstein, Anna Niarakis, Henning Hermjakob, Alexander R Pico, Egon L Wilighagen, Chris T Evelo, Jan Hasenauer, Falk Schreiber, Andreas Dräger, Emek Demir, Olaf Wolkenhauer, Laura I Furlong, Emmanuel Barillot, Joaquín Dopazo, Aurelio Orta Resendiz, Francesco Messina, Alfonso Valencia, Akira Funahashi, Hiroaki Kitano, Charles Auffray, Rudi Balling, Reinhard Schneider
Author Correction: COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms. Scientific data 7 (1) (2020)
Panagiotis Isigonis, Antreas Afantitis, Dalila Antunes, Alena Bartonova, Ali Beitollahi, Nils Bohmer, Evert Bouman, Qasim Chaudhry, Mihaela Roxana Cimpan, Emil Cimpan, Shareen Doak, Damien Dupin, Doreen Fedrigo, Valérie Fessard, Maciej Gromelski, Arno C Gutleb, Sabina Halappanavar, Peter H M Hoet, Nina Jeliazkova, Stéphane Jomini, Sabine Lindner, Igor Linkov, Eleonora Marta Longhin, Iseult Lynch, Ineke Malsch, Antonio Marcomini, Espen Mariussen, Jesus M de la Fuente, Georgia Melagraki, Finbarr Murphy, Michael Neaves, Rolf Packroff, Stefan Pfuhler, Tomasz Puzyn, Qamar Rahman, Elise Rundén Pran, Elena Semenzin, Tommaso Serchi, Christoph Steinbach, Benjamin Trump, Ivana Vinković Vrček, David Warheit, Mark R Wiesner, Egon L Wilighagen, Maria Dusinska
Risk Governance of Emerging Technologies Demonstrated in Terms of its Applicability to Nanomaterials. Small (Weinheim an der Bergstrasse, Germany) 16 (36) (2020)
Ammar Ammar, Serena Bonaretti, Laurent A Winckers, Joris T K Quik, Martine Bakker, Dieter Maier, Iseult Lynch, Jeaphianne P M van Rijn, Egon L Wilighagen
A Semi-Automated Workflow for FAIR Maturity Indicators in the Life Sciences. Nanomaterials (Basel, Switzerland) 10 (10) (2020)
Rajarashi Guha, Egon L Wilighagen
Learning cheminformatics. Journal of cheminformatics 12 (1) (2020)
Gert Wohlgemuth, Sajjan S Mehta, Ramon F Mejia, Steffen Neumann, Diego Pedrosa, Tomáš Pluskal, Emma L Schymanski, Egon L Wilighagen, Michael Wilson, David S Wishart, Masanori Arita, Pieter C Dorrestein, Nuno Bandeira, Mingxun Wang, Tobias Schulze, Reza M Salek, Christoph Steinbeck, Venkata Chandrasekhar Nainala, Robert Mistrik, Takaaki Nishioka, Oliver Fiehn
SPLASH, a hashed identifier for mass spectra. Nature biotechnology 34 (11) (2019)
Jan Stanstrup, Corey D Broeckling, Rick Helmus, Nils Hoffmann, Ewy A Math, Thomas Naake, Luca Nicolotti, Kristian Peters, Johannes Rainer, Reza M Salek, Tobias Schulze, Emma L Schymanski, Michael A Stravs, Etienne A Thévenot, Hendrik Treutler, Ralf J M Weber, Egon L Wilighagen, Michael Witting, Steffen Neumann
The metaRbolomics Toolbox in Bioconductor and beyond. Metabolites 9 (10) (2019)
Egon L Wilighagen, Nina Jeliazkova, Rajarashi Guha
Journal of Cheminformatics, ORCID, and GitHub. Journal of cheminformatics 11 (1) (2019)
Ryan A Miller, Peter M Woollard, Egon L Wilighagen, Daniela Digles, Martina Kutmon, Antonis Loizou, Andra Waagmeester, Stefan Senger, Chris T A Evelo
Explicit interaction information from WikiPathways in RDF facilitates drug discovery in the Open PHACTS Discovery Platform. F1000Research 7 (2018)
Martina Kutmon, Friederike Ehrhart, Egon L Wilighagen, Chris T A Evelo, Susan L M Coort
CyTargetLinker app update: A flexible solution for network extension in Cytoscape. F1000Research (2018)
Ryan A Miller, Peter M Woollard, Egon L Wilighagen, Daniela Digles, Martina Kutmon, Antonis Loizou, Andra Waagmeester, Stefan Senger, Chris T A Evelo
Explicit interaction information from WikiPathways in RDF facilitates drug discovery in the Open PHACTS Discovery Platform. F1000Research (2018)
Martina Kutmon, Friederike Ehrhart, Egon L Wilighagen, Chris T A Evelo, Susan L M Coort
CyTargetLinker app update: A flexible solution for network extension in Cytoscape. F1000Research 7 (2018)
Rajarashi Guha, Egon L Wilighagen
Helping to improve the practice of cheminformatics. Journal of cheminformatics 9 (1) (2017)
Merlijn van Rijswijk, Charlie Beirnaert, Christophe Caron, Marta Cascante, Victoria Dominguez, Warwick B Dunn, Timothy M D Ebbels, Franck Giacomoni, Alejandra N Gonzalez-Beltran, Thomas Hankemeier, Kenneth Haug, Jose L Izquierdo-Garcia, Rafael C Jimenez, Fabien Jourdan, Namrata Kale, Maria I Klapa, Oliver Kohlbacher, Kairi Koort, Kim Kultima, Gildas Le Corguillé, Pablo Moreno, Nicholas K Moschonas, Steffen Neumann, Claire O'Donovan, Martin Reczko, Philippe Rocca-Serra, Antonio Rosato, Reza M Salek, Susanna-Assunta Sansone, Venkata Satagopam, Daniel Schober, Ruth Shimmo, Rachel A Spicer, Ola Spjuth, Etienne A Thévenot, Mark R Viant, Ralf J M Weber, Egon L Wilighagen, Gianluigi Zanetti, Christoph Steinbeck
The future of metabolomics in ELIXIR. F1000Research 6 (2017)
Pekka Kohonen, Juuso A Parkkinen, Egon L Wilighagen, Rebecca Ceder, Krister Wennerberg, Samuel Kaski, Roland C Grafström
A transcriptomics data-driven gene space accurately predicts liver cytopathology and drug-induced liver injury. Nature communications 8 (2017)
Egon L Wilighagen, John W Mayfield, Jonathan Alvarsson, Arvid Berg, Lars Carlsson, Nina Jeliazkova, Stefan Kuhn, Tomáš Pluskal, Miquel Rojas-Chertó, Ola Spjuth, Gilleain Torrance, Chris T A Evelo, Rajarashi Guha, Christoph Steinbeck
Erratum to: The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching. Journal of cheminformatics 9 (1) (2017)
Egon L Wilighagen, John W Mayfield, Jonathan Alvarsson, Arvid Berg, Lars Carlsson, Nina Jeliazkova, Stefan Kuhn, Tomáš Pluskal, Miquel Rojas-Chertó, Ola Spjuth, Gilleain Torrance, Chris T A Evelo, Rajarashi Guha, Christoph Steinbeck
The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching. Journal of cheminformatics 9 (1) (2017)
Merlijn van Rijswijk, Charlie Beirnaert, Christophe Caron, Marta Cascante, Victoria Dominguez, Warwick B Dunn, Timothy M D Ebbels, Franck Giacomoni, Alejandra N Gonzalez-Beltran, Thomas Hankemeier, Kenneth Haug, Jose L Izquierdo-Garcia, Rafael C Jimenez, Fabien Jourdan, Namrata Kale, Maria I Klapa, Oliver Kohlbacher, Kairi Koort, Kim Kultima, Gildas Le Corguillé, Pablo Moreno, Nicholas K Moschonas, Steffen Neumann, Claire O'Donovan, Martin Reczko, Philippe Rocca-Serra, Antonio Rosato, Reza M Salek, Susanna-Assunta Sansone, Venkata Satagopam, Daniel Schober, Ruth Shimmo, Rachel A Spicer, Ola Spjuth, Etienne A Thévenot, Mark R Viant, Ralf J M Weber, Egon L Wilighagen, Gianluigi Zanetti, Christoph Steinbeck
The future of metabolomics in ELIXIR. F1000Research (2017)
Andra Waagmeester, Martina Kutmon, Anders Riutta, Ryan A Miller, Egon L Wilighagen, Chris T A Evelo, Alexander R Pico
Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources. PLoS computational biology 12 (6) (2016)
Martina Kutmon, Anders Riutta, Nuno Nunes, Kristina Hanspers, Egon L Wilighagen, Anwesha Bohler, Jonathan Mélius, Andra Waagmeester, Sravanthi R Sinha, Ryan A Miller, Susan L M Coort, Elisa Cirillo, Bart Smeets, Chris T Evelo, Alexander R Pico
WikiPathways: capturing the full diversity of pathway knowledge. Nucleic acids research 44 (D1) (2015)

Egon L Wilighagen.css-eqlu8i{font-size:small;padding-left:4px;} (Egon Willighagen, Egon L Willighagen)

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Egon L Wilighagen (Egon Willighagen, Egon L Willighagen)