Kathryn S Lilley

ORCID

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 32

Top Venues

Nature communications

Molecular systems biology

Nature biotechnology

Nature methods

University of Cambridge

University of Sheffield (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Cambridge Nov 01 2000

United Kingdom

Professor :: Biochemistry

Education History

University of Sheffield Oct 01 1985 - Jan 31 1989

United Kingdom

PHD :: Biochemistry

University of Sheffield Sep 01 1982 - Jul 01 1985

United Kingdom

BSC :: Biochemistry

Publications

Mie Monti, Reyme Herman, Leonardo Mancini, Charlotte Capitanchik, Karen Davey, Charlotte S Dawson, Jernej Ule, Gavin H Thomas, Anne E Willis, Kathryn S Lilley, Eneko Villanueva
Interrogation of RNA-protein interaction dynamics in bacterial growth. Molecular systems biology 20 (5) (2024)
Mie Monti, Reyme Herman, Leonardo Mancini, Charlotte Capitanchik, Karen Davey, Charlotte S Dawson, Jernej Ule, Gavin H Thomas, Anne E Willis, Kathryn S Lilley, Eneko Villanueva
Interrogation of RNA-protein interaction dynamics in bacterial growth. Molecular systems biology (2024)
Mie Monti, Reyme Herman, Leonardo Mancini, Charlotte Capitanchik, Karen Davey, Charlotte S Dawson, Jernej Ule, Gavin H Thomas, Anne E Willis, Kathryn S Lilley, Eneko Villanueva
Interrogation of RNA-protein interaction dynamics in bacterial growth. Molecular systems biology 20 (5) (2024)
Mie Monti, Reyme Herman, Leonardo Mancini, Charlotte Capitanchik, Karen Davey, Charlotte S Dawson, Jernej Ule, Gavin H Thomas, Anne E Willis, Kathryn S Lilley, Eneko Villanueva
Interrogation of RNA-protein interaction dynamics in bacterial growth. Molecular systems biology 20 (5) (2024)
Mie Monti, Reyme Herman, Leonardo Mancini, Charlotte Capitanchik, Karen Davey, Charlotte S Dawson, Jernej Ule, Gavin H Thomas, Anne E Willis, Kathryn S Lilley, Eneko Villanueva
Interrogation of RNA-protein interaction dynamics in bacterial growth. Molecular systems biology 20 (5) (2024)
Andrew D Beale, Edward A Hayter, Priya Crosby, Utham K Valekunja, Rachel S Edgar, Johanna E Chesham, Elizabeth S Maywood, Fatima H Labeed, Akhilesh B Reddy, Kenneth P Wright, Kathryn S Lilley, David A Bechtold, Michael H Hastings, John S O'Neill
Mechanisms and physiological function of daily haemoglobin oxidation rhythms in red blood cells. The EMBO journal (2023)
Alistair R Hines, Matthew Edgeworth, Paul W A Devine, Samuel Shepherd, Nicholas Chatterton, Claire Turner, Kathryn S Lilley, Xiaoyu Chen, Nicholas J Bond
Multi-Attribute Monitoring Method for Process Development of Engineered Antibody for Site-Specific Conjugation. Journal of the American Society for Mass Spectrometry (2023)
Eneko Villanueva, Tom S Smith, Mariavittoria Pizzinga, Mohamed Elzek, Rayner M L Queiroz, Robert F Harvey, Lisa M Breckels, Oliver M Crook, Mie Monti, Veronica Dezi, Anne E Willis, Kathryn S Lilley
System-wide analysis of RNA and protein subcellular localization dynamics. Nature methods (2023)
Nicola M Moloney, Konstantin Barylyuk, Eelco C Tromer, Oliver M Crook, Lisa M Breckels, Kathryn S Lilley, Ross Frederick Waller, Paula MacGregor
Mapping diversity in African trypanosomes using high resolution spatial proteomics. Nature communications 14 (1) (2023)
Thomas E Mulroney, Tuija Pöyry, Juan Carlos Yam-Puc, Maria Rust, Robert F Harvey, Lajos Kalmar, Emily C Horner, Lucy Booth, Alexander P Ferreira, Mark Stoneley, Ritwick Sawarkar, Alexander J Mentzer, Kathryn S Lilley, Christopher Mark Smales, Tobias von der Haar, Lance Turtle, Susanna J Dunachie, Paul Klenerman, James E D Thaventhiran, Anne E Willis
N 1 -methylpseudouridylation of mRNA causes +1 ribosomal frameshifting. Nature (2023)
Vadim Demichev, Lukasz Szyrwiel, Fengchao Yu, Guo Ci Teo, George A Rosenberger, Agathe Niewienda, Daniela Ludwig, Jens Decker, Stephanie Kaspar-Schoenefeld, Kathryn S Lilley, Michael Mülleder, Alexey I Nesvizhskii, Markus Ralser
dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts. Nature communications 13 (1) (2022)
Georg Kustatscher, Tom Collins, Anne-Claude Gingras, Tiannan Guo, Henning Hermjakob, Trey Ideker, Kathryn S Lilley, Emma Lundberg, Edward M Marcotte, Markus Ralser, Juri Rappsilber
Understudied proteins: opportunities and challenges for functional proteomics. Nature methods 19 (7) (2022)
Oliver M Crook, Colin T R Davies, Lisa M Breckels, Josie A Christopher, Laurent Gatto, Paul D W Kirk, Kathryn S Lilley
Inferring differential subcellular localisation in comparative spatial proteomics using BANDLE. Nature communications 13 (1) (2022)
Clarissa Braccia, Josie A Christopher, Oliver M Crook, Lisa M Breckels, Rayner M L Queiroz, Nara Liessi, Valeria Tomati, Valeria Capurro, Tiziano Bandiera, Simona Baldassari, Nicoletta Pedemonte, Kathryn S Lilley, Andrea Armirotti
CFTR Rescue by Lumacaftor (VX-809) Induces an Extensive Reorganization of Mitochondria in the Cystic Fibrosis Bronchial Epithelium. Cells 11 (12) (2022)
Georg Kustatscher, Tom Collins, Anne-Claude Gingras, Tiannan Guo, Henning Hermjakob, Trey Ideker, Kathryn S Lilley, Emma Lundberg, Edward M Marcotte, Markus Ralser, Juri Rappsilber
An open invitation to the Understudied Proteins Initiative. Nature biotechnology 40 (6) (2022)
Eleni Kafkia, Amparo Andres-Pons, Kerstin Ganter, Markus Seiler, Tom S Smith, Anna Andrejeva, Paula Jouhten, Filipa Pereira, Catarina Franco, Anna Kuroshchenkova, Sergio Leone, Ritwick Sawarkar, Rebecca H Boston, James E D Thaventhiran, Judith Barbara Zaugg, Kathryn S Lilley, Christophe Lancrin, Martin Beck, Kiran Raosaheb Patil
Operation of a TCA cycle subnetwork in the mammalian nucleus. Science advances 8 (35) (2022)
Siqi Fang, Paul D W Kirk, Marcus Bantscheff, Kathryn S Lilley, Oliver M Crook
A Bayesian semi-parametric model for thermal proteome profiling. Communications biology 4 (1) (2021)
Josie A Christopher, Charlotte Stadler, Claire E Martin, Marcel Morgenstern, Yanbo Pan, Cora N Betsinger, David G Rattray, Diana Mahdessian, Anne-Claude Gingras, Bettina Warscheid, Janne Lehtiö, Ileana M Cristea, Leonard J Foster, Andrew Emili, Kathryn S Lilley
Subcellular proteomics. Nature reviews. Methods primers 1 (2021)
Christoph B Messner, Vadim Demichev, Nic Bloomfield, Jason S L Yu, Matthew White, Marco Kreidl, Anna-Sophia Egger, Anja Freiwald, Gordana Ivosev, Fras Wasim, Aleksej Zelezniak, Linda Jürgens, Norbert Suttorp, Leif-Erik Sander, Florian Kurth, Kathryn S Lilley, Michael Mülleder, Stephen Tate, Markus Ralser
Ultra-fast proteomics with Scanning SWATH. Nature biotechnology 39 (7) (2021)
Chaitanya Erady, Adam R Boxall, Shraddha Puntambekar, Narendra Suhas Jagannathan, Ruchi Chauhan, David Chong, Narendra Meena, Apurv Kulkarni, Bhagyashri Kasabe, Kethaki Prathivadi Bhayankaram, Yagnesh Umrania, Adam Andreani, Jean Nel, Matthew Thomas Wayland, Cristina Pina, Kathryn S Lilley, Sudhakaran Prabakaran
Pan-cancer analysis of transcripts encoding novel open-reading frames (nORFs) and their potential biological functions. NPJ genomic medicine 6 (1) (2021)
Claire M Mulvey, Lisa M Breckels, Oliver M Crook, David J Sanders, Andre L R Ribeiro, Aikaterini Geladaki, Andy Christoforou, Nina Kočevar Britovšek, Tracey Hurrell, Michael J Deery, Laurent Gatto, Andrew Mark Smith, Kathryn S Lilley
Spatiotemporal proteomic profiling of the pro-inflammatory response to lipopolysaccharide in the THP-1 human leukaemia cell line. Nature communications 12 (1) (2021)
Eneko Villanueva, Tom S Smith, Rayner M L Queiroz, Mie Monti, Mariavittoria Pizzinga, Mohamed Elzek, Veronica Dezi, Robert F Harvey, Manasa Ramakrishna, Anne E Willis, Kathryn S Lilley
Efficient recovery of the RNA-bound proteome and protein-bound transcriptome using phase separation (OOPS). Nature protocols 15 (8) (2020)
Oliver M Crook, Tom Smith, Mohamed Elzek, Kathryn S Lilley
Moving Profiling Spatial Proteomics Beyond Discrete Classification. Proteomics 20 (23) (2020)
David-Paul Minde, Manasa Ramakrishna, Kathryn S Lilley
Biotin proximity tagging favours unfolded proteins and enables the study of intrinsically disordered regions. Communications biology 3 (1) (2020)
Rayner M L Queiroz, Tom S Smith, Eneko Villanueva, Maria Marti-Solano, Mie Monti, Mariavittoria Pizzinga, Dan-Mircea Mirea, Manasa Ramakrishna, Robert F Harvey, Veronica Dezi, Gavin H Thomas, Anne E Willis, Kathryn S Lilley
Comprehensive identification of RNA-protein interactions in any organism using orthogonal organic phase separation (OOPS). Nature biotechnology 37 (2) (2019)
Harriet T Parsons, Tim J Stevens, Heather E McFarlane, Silvia Vidal-Melgosa, Johannes Griss, Nicola Lawrence, Richard Butler, Mirta Mittelstedt Leal de Sousa, Michelle R Salemi, William George Tycho Willats, Christopher J Petzold, Joshua L Heazlewood, Kathryn S Lilley
Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. The Plant cell 31 (9) (2019)
Vadim Demichev, Christoph B Messner, Spyros I Vernardis, Kathryn S Lilley, Markus Ralser
DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput. Nature methods 17 (1) (2019)
Laura L Baers, Lisa M Breckels, Lauren A Mills, Laurent Gatto, Michael J Deery, Tim J Stevens, Christopher J Howe, Kathryn S Lilley, David J Lea-Smith
Proteome Mapping of a Cyanobacterium Reveals Distinct Compartment Organization and Cell-Dispersed Metabolism. Plant physiology 181 (4) (2019)
Aikaterini Geladaki, Nina Kočevar Britovšek, Lisa M Breckels, Tom S Smith, Owen L Vennard, Claire M Mulvey, Oliver M Crook, Laurent Gatto, Kathryn S Lilley
Combining LOPIT with differential ultracentrifugation for high-resolution spatial proteomics. Nature communications 10 (1) (2019)
Grace M Loxley, Jennifer Unsworth, Michael J Turton, Alexandra Jebb, Kathryn S Lilley, Deborah M Simpson, Daniel J Rigden, Jane L Hurst, Robert J Beynon
Glareosin: a novel sexually dimorphic urinary lipocalin in the bank vole, Myodes glareolus. Open biology 7 (9) (2018)
Oliver M Crook, Claire M Mulvey, Paul D W Kirk, Kathryn S Lilley, Laurent Gatto
A Bayesian mixture modelling approach for spatial proteomics. PLoS computational biology 14 (11) (2018)
Claire M Mulvey, Lisa M Breckels, Aikaterini Geladaki, Nina Kočevar Britovšek, Daniel J H Nightingale, Andy Christoforou, Mohamed Elzek, Michael J Deery, Laurent Gatto, Kathryn S Lilley
Using hyperLOPIT to perform high-resolution mapping of the spatial proteome. Nature protocols 12 (6) (2017)
Johanna S Rees, Xue-Wen Li, Sarah Perrett, Kathryn S Lilley, Antony P Jackson
Protein Neighbors and Proximity Proteomics. Molecular & cellular proteomics : MCP 14 (11) (2015)
Nino Nikolovski, Pavel V Shliaha, Laurent Gatto, Paul Dupree, Kathryn S Lilley
Label-free protein quantification for plant Golgi protein localization and abundance. Plant physiology 166 (2) (2014)

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Publication Activity (10 Years)

Top Topics

Top Venues

Kathryn S Lilley