Rachael C Kretsch (Rachael Kretsch)

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 20

Top Topics

High Resolution

Respiratory Syndrome Coronavirus

Electron Microscopy

Top Venues

bioRxiv : the preprint server for biology

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Rachael C Kretsch, Lily Xu, Ivan N Zheludev, Xueting Zhou, Rui Huang, Grace Nye, Shanshan Li, Kaiming Zhang, Wah Chiu, Rachel J Hagey
Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Rachael C Kretsch, Lily Xu, Ivan N Zheludev, Xueting Zhou, Rui Huang, Grace Nye, Shanshan Li, Kaiming Zhang, Wah Chiu, Rachel J Hagey
Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Rachael C Kretsch, Lily Xu, Ivan N Zheludev, Xueting Zhou, Rui Huang, Grace Nye, Shanshan Li, Kaiming Zhang, Wah Chiu, Rachel J Hagey
Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Shujun He, Rui Huang, Jill Townley, Rachael C Kretsch, Thomas G Karagianes, David B T Cox, Hamish Blair, Dmitry Penzar, Valeriy Vyaltsev, Elizaveta Aristova, Arsenii Zinkevich, Artemy Bakulin, Hoyeol Sohn, Daniel Krstevski, Takaaki Fukui, Fumiya Tatematsu, Yusuke Uchida, Donghoon Jang, Jun Seong Lee, Roger Shieh, Tom Ma, Eduard Martynov, Maxim V Shugaev, Habib S T Bukhari, Kazuki Fujikawa, Kazuki Onodera, Christof Henkel, Shlomo Ron, Jonathan Romano, John J Nicol, Grace P Nye, Yuan Wu, Christian A Choe, Walter Reade, null null, Rachel J Hagey
Ribonanza: deep learning of RNA structure through dual crowdsourcing. bioRxiv : the preprint server for biology (2024)
Shujun He, Rui Huang, Jill Townley, Rachael C Kretsch, Thomas G Karagianes, David B T Cox, Hamish Blair, Dmitry Penzar, Valeriy Vyaltsev, Elizaveta Aristova, Arsenii Zinkevich, Artemy Bakulin, Hoyeol Sohn, Daniel Krstevski, Takaaki Fukui, Fumiya Tatematsu, Yusuke Uchida, Donghoon Jang, Jun Seong Lee, Roger Shieh, Tom Ma, Eduard Martynov, Maxim V Shugaev, Habib S T Bukhari, Kazuki Fujikawa, Kazuki Onodera, Christof Henkel, Shlomo Ron, Jonathan Romano, John J Nicol, Grace P Nye, Yuan Wu, Christian A Choe, Walter Reade, null null, Rachel J Hagey
Ribonanza: deep learning of RNA structure through dual crowdsourcing. bioRxiv : the preprint server for biology (2024)
Shujun He, Rui Huang, Jill Townley, Rachael C Kretsch, Thomas G Karagianes, David B T Cox, Hamish Blair, Dmitry Penzar, Valeriy Vyaltsev, Elizaveta Aristova, Arsenii Zinkevich, Artemy Bakulin, Hoyeol Sohn, Daniel Krstevski, Takaaki Fukui, Fumiya Tatematsu, Yusuke Uchida, Donghoon Jang, Jun Seong Lee, Roger Shieh, Tom Ma, Eduard Martynov, Maxim V Shugaev, Habib S T Bukhari, Kazuki Fujikawa, Kazuki Onodera, Christof Henkel, Shlomo Ron, Jonathan Romano, John J Nicol, Grace P Nye, Yuan Wu, Christian A Choe, Walter Reade, null null, Rachel J Hagey
Ribonanza: deep learning of RNA structure through dual crowdsourcing. bioRxiv : the preprint server for biology (2024)
Rachael C Kretsch, Lily Xu, Ivan N Zheludev, Xueting Zhou, Rui Huang, Grace Nye, Shanshan Li, Kaiming Zhang, Wah Chiu, Rachel J Hagey
Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Shujun He, Rui Huang, Jill Townley, Rachael C Kretsch, Thomas G Karagianes, David B T Cox, Hamish Blair, Dmitry Penzar, Valeriy Vyaltsev, Elizaveta Aristova, Arsenii Zinkevich, Artemy Bakulin, Hoyeol Sohn, Daniel Krstevski, Takaaki Fukui, Fumiya Tatematsu, Yusuke Uchida, Donghoon Jang, Jun Seong Lee, Roger Shieh, Tom Ma, Eduard Martynov, Maxim V Shugaev, Habib S T Bukhari, Kazuki Fujikawa, Kazuki Onodera, Christof Henkel, Shlomo Ron, Jonathan Romano, John J Nicol, Grace P Nye, Yuan Wu, Christian A Choe, Walter Reade, Eterna Participants, Rachel J Hagey
Ribonanza: deep learning of RNA structure through dual crowdsourcing. bioRxiv : the preprint server for biology (2024)
Rachael C Kretsch, Lily Xu, Ivan N Zheludev, Xueting Zhou, Rui Huang, Grace Nye, Shanshan Li, Kaiming Zhang, Wah Chiu, Rachel J Hagey
Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Shujun He, Rui Huang, Jill Townley, Rachael C Kretsch, Thomas G Karagianes, David B T Cox, Hamish Blair, Dmitry Penzar, Valeriy Vyaltsev, Elizaveta Aristova, Arsenii Zinkevich, Artemy Bakulin, Hoyeol Sohn, Daniel Krstevski, Takaaki Fukui, Fumiya Tatematsu, Yusuke Uchida, Donghoon Jang, Jun Seong Lee, Roger Shieh, Tom Ma, Eduard Martynov, Maxim V Shugaev, Habib S T Bukhari, Kazuki Fujikawa, Kazuki Onodera, Christof Henkel, Shlomo Ron, Jonathan Romano, John J Nicol, Grace P Nye, Yuan Wu, Christian A Choe, Walter Reade, null null, Rachel J Hagey
Ribonanza: deep learning of RNA structure through dual crowdsourcing. bioRxiv : the preprint server for biology (2024)
Rachel J Hagey, Rachael C Kretsch, Adam J Simpkin, Thomas Mulvaney, Phillip Pham, Ramya Rangan, Fan Bu, Ronan M Keegan, Andriy Kryshtafovych, Daniel J Rigden, Zhichiao Miao, Eric Westhof
Assessment of three-dimensional RNA structure prediction in CASP15. bioRxiv : the preprint server for biology (2023)
Rachel J Hagey, Rachael C Kretsch, Adam J Simpkin, Thomas Mulvaney, Phillip Pham, Ramya Rangan, Fan Bu, Ronan M Keegan, Andriy Kryshtafovych, Daniel J Rigden, Zhichiao Miao, Eric Westhof
Assessment of three-dimensional RNA structure prediction in CASP15. Proteins (2023)
Rachel J Hagey, Rachael C Kretsch, Adam J Simpkin, Thomas Mulvaney, Phillip Pham, Ramya Rangan, Fan Bu, Ronan M Keegan, Andriy Kryshtafovych, Daniel J Rigden, Zhichiao Miao, Eric Westhof
Assessment of three-dimensional RNA structure prediction in CASP15. bioRxiv : the preprint server for biology (2023)
Thomas Mulvaney, Rachael C Kretsch, Luc Elliott, Joseph George Beton, Andriy Kryshtafovych, Daniel J Rigden, Rachel J Hagey, Andriy Kryshtafovych
CASP15 cryoEM protein and RNA targets: refinement and analysis using experimental maps. bioRxiv : the preprint server for biology (2023)
Rachael C Kretsch, Ebbe Sloth Andersen, Janusz M Bujnicki, Wah Chiu, Rachel J Hagey, Bingnan Luo, Benoît Masquida, Ewan K S McRae, Griffin M Schroeder, Zhaoming Su, Joseph E Wedekind, Lily Xu, Kaiming Zhang, Ivan N Zheludev, John Moult, Andriy Kryshtafovych
RNA target highlights in CASP15: Evaluation of predicted models by structure providers. Proteins (2023)
Rachel J Hagey, Rachael C Kretsch, Adam J Simpkin, Thomas Mulvaney, Phillip Pham, Ramya Rangan, Fan Bu, Ronan M Keegan, Andriy Kryshtafovych, Daniel J Rigden, Zhichiao Miao, Eric Westhof
Assessment of three-dimensional RNA structure prediction in CASP15. bioRxiv : the preprint server for biology (2023)
Rachael C Kretsch, Lily Xu, Ivan N Zheludev, Xueting Zhou, Rui Huang, Grace P Nye, Shanshan Li, Kaiming Zhang, Wah Chiu, Rachel J Hagey
Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. bioRxiv : the preprint server for biology (2023)
Thomas Mulvaney, Rachael C Kretsch, Luc Elliott, Joseph George Beton, Andriy Kryshtafovych, Daniel J Rigden, Rachel J Hagey, Andriy Kryshtafovych
CASP15 cryo-EM protein and RNA targets: Refinement and analysis using experimental maps. Proteins 91 (12) (2023)
Andriy Kryshtafovych, Maciej Antczak, Marta Szachniuk, Tomasz Zok, Rachael C Kretsch, Ramya Rangan, Phillip Pham, Rachel J Hagey, Xavier Robin, Gabriel Studer, Janani Durairaj, Jerome Eberhardt, Aaron Sweeney, Maya Topf, Torsten Schwede, Krzysztof Fidelis, John Moult
New prediction categories in CASP15. Proteins (2023)
Kaiming Zhang, Ivan N Zheludev, Rachel J Hagey, Marie Teng-Pei Wu, Raphael Haslecker, Yixuan J Hou, Rachael C Kretsch, Grigore D Pintilie, Ramya Rangan, Wipapat Kladwang, Shanshan Li, Edward A Pham, Claire Bernardin-Souibgui, Ralph S Baric, Timothy P Sheahan, Victoria D Souza, Jeffrey S Glenn, Wah Chiu, Rachel J Hagey
Cryo-electron Microscopy and Exploratory Antisense Targeting of the 28-kDa Frameshift Stimulation Element from the SARS-CoV-2 RNA Genome. bioRxiv : the preprint server for biology (2020)