Krzysztof Fidelis

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 20

Top Topics

Convolutional Neural Network

Respiratory Syndrome Coronavirus

Capillary Electrophoresis

Top Venues

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Leila Tamara Alexander, Janani Durairaj, Andriy Kryshtafovych, Luciano Andrés Abriata, Yusupha Bayo, Gira Bhabha, Cécile Breyton, Simon G Caulton, James Chen, Séraphine Degroux, Damian C Ekiert, Benedikte S Erlandsen, Peter L Freddolino, Dominic Gilzer, Chris Greening, Jonathan M Grimes, Rhys W Grinter, Manickam Gurusaran, Marcus D Hartmann, Charlie J Hitchman, Jeremy Russell Keown, Ashleigh Kropp, Petri Kursula, Andrew Lee Lovering, Bruno Lemaître, Andrea Lia, Shiheng Liu, Maria Logotheti, Shuze Lu, Sigurbjörn Markússon, Mitchell D Miller, George Minasov, Hartmut H Niemann, Felipe Opazo, George N Philips, Owen Richard Davies, Samuel Rommelaere, Monica Rosas-Lemus, Pietro Roversi, Karla J F Satchell, Nathan Smith, Mark A Wilson, Kuan-Lin Wu, Xian Xia, Han Xiao, Wenhua Zhang, Z Hong Zhou, Krzysztof Fidelis, Andriy Kryshtafovych, John Moult, Torsten Schwede
Protein target highlights in CASP15: Analysis of models by structure providers. Proteins (2023)
Andriy Kryshtafovych, Torsten Schwede, Andriy Kryshtafovych, Krzysztof Fidelis, John Moult
Critical assessment of methods of protein structure prediction (CASP)-Round XV. Proteins (2023)
Andriy Kryshtafovych, Maciej Antczak, Marta Szachniuk, Tomasz Zok, Rachael C Kretsch, Ramya Rangan, Phillip Pham, Rachel J Hagey, Xavier Robin, Gabriel Studer, Janani Durairaj, Jerome Eberhardt, Aaron Sweeney, Maya Topf, Torsten Schwede, Krzysztof Fidelis, John Moult
New prediction categories in CASP15. Proteins (2023)
Jerzy Osipiuk, Pawel M Wydorski, Benjamin T Lanham, Christine Tesar, Michael Endres, Elizabeth Engle, Robert Jedrzejczak, Vishruth Mullapudi, Karolina Michalska, Krzysztof Fidelis, David Fushman, Andrzej Joachimiak, Lukasz A Joachimiak
Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin. bioRxiv : the preprint server for biology (2022)
Andriy Kryshtafovych, Torsten Schwede, Andriy Kryshtafovych, Krzysztof Fidelis, John Moult
Critical assessment of methods of protein structure prediction (CASP)-Round XIV. Proteins 89 (12) (2021)
Leila Tamara Alexander, Rosalba Lepore, Andriy Kryshtafovych, Athanassios Adamopoulos, Markus Alahuhta, Ann M Arvin, Yannick J Bomble, Bettina Böttcher, Cécile Breyton, Valerio Chiarini, Naga Babu Chinnam, Wah Chiu, Krzysztof Fidelis, Rhys W Grinter, Gagan D Gupta, Marcus D Hartmann, Christopher S Hayes, Tatjana Heidebrecht, Andrea Ilari, Andrzej Joachimiak, Youngchang Kim, Romain Linares, Andrew L Lovering, Vladimir V Lunin, Andrei N Lupas, Cihan Makbul, Karolina Michalska, John Moult, Prasun K Mukherjee, William Sam Nutt, Stefan L Oliver, Anastassis Perrakis, Lucy Stols, John A Tainer, Maya Topf, Susan E Tsutakawa, Mauricio Valdivia-Delgado, Torsten Schwede
Target highlights in CASP14: Analysis of models by structure providers. Proteins 89 (12) (2021)
Andriy Kryshtafovych, John Moult, Wendy M Billings, Dennis Della Corte, Krzysztof Fidelis, Sohee Kwon, Kliment Olechnovič, Chaok Seok, Česlovas Venclovas, Jonghun Won, null null
Modeling SARS-CoV-2 proteins in the CASP-commons experiment. Proteins 89 (12) (2021)
Yuanpeng Janet Huang, Ning Zhang, Beate Bersch, Krzysztof Fidelis, Masayori Inouye, Yojiro Ishida, Andriy Kryshtafovych, Naohiro Kobayashi, Yutaka Kuroda, Gaohua Liu, Andy LiWang, Gurla V T Swapna, Nan Wu, Toshio Yamazaki, Gaetano T Montelione
Assessment of prediction methods for protein structures determined by NMR in CASP14: Impact of AlphaFold2. Proteins 89 (12) (2021)
Davide Sala, Yuanpeng Janet Huang, Casey A Cole, David A Snyder, Gaohua Liu, Yojiro Ishida, G V T Swapna, Kelly P Brock, Chris Sander, Krzysztof Fidelis, Andriy Kryshtafovych, Masayori Inouye, Roberto Tejero, Homayoun Valafar, Antonio Rosato, Gaetano T Montelione
Protein structure prediction assisted with sparse NMR data in CASP13. Proteins 87 (12) (2020)
J Eduardo Fajardo, Rojan Shrestha, Nelson Gil, Adam Belsom, Silvia N Crivelli, Cezary Czaplewski, Krzysztof Fidelis, Sergei Grudinin, Mikhail Karasikov, Agnieszka S Karczyńska, Andriy Kryshtafovych, Alexander Leitner, Adam Liwo, Emilia A Lubecka, Bohdan Monastyrskyy, Guillaume Pagès, Juri Rappsilber, Adam K Sieradzan, Celina Sikorska, Esben Trabjerg, Andras Fiser
Assessment of chemical-crosslink-assisted protein structure modeling in CASP13. Proteins 88 (3) (2020)
J Eduardo Fajardo, Rojan Shrestha, Nelson Gil, Adam Belsom, Silvia N Crivelli, Cezary Czaplewski, Krzysztof Fidelis, Sergei Grudinin, Mikhail Karasikov, Agnieszka S Karczyńska, Andriy Kryshtafovych, Alexander Leitner, Adam Liwo, Emilia A Lubecka, Bohdan Monastyrskyy, Guillaume Pagès, Juri Rappsilber, Adam K Sieradzan, Celina Sikorska, Esben Trabjerg, Andras Fiser
Assessment of chemical-crosslink-assisted protein structure modeling in CASP13. Proteins 87 (12) (2019)
Rosalba Lepore, Andriy Kryshtafovych, Markus Alahuhta, Harshul A Veraszto, Yannick J Bomble, Joshua C Bufton, Alex N Bullock, Cody Caba, Hongnan Cao, Owen R Davies, Ambroise Desfosses, Matthew Dunne, Krzysztof Fidelis, Celia W Goulding, Manickam Gurusaran, Irina Gutsche, Christopher J Harding, Marcus D Hartmann, Christopher S Hayes, Andrzej Joachimiak, Petr G Leiman, Peter Loppnau, Andrew L Lovering, Vladimir V Lunin, Karolina Michalska, Ignacio Mir-Sanchis, A K Mitra, John Moult, George N Phillips, Daniel M Pinkas, Phoebe A Rice, Yufeng Tong, Maya Topf, Jonathan D Walton, Torsten Schwede
Target highlights in CASP13: Experimental target structures through the eyes of their authors. Proteins 87 (12) (2019)
Rojan Shrestha, Eduardo Fajardo, Nelson Gil, Krzysztof Fidelis, Andriy Kryshtafovych, Bohdan Monastyrskyy, Andras Fiser
Assessing the accuracy of contact predictions in CASP13. Proteins 87 (12) (2019)
Andriy Kryshtafovych, Torsten Schwede, Andriy Kryshtafovych, Krzysztof Fidelis, John Moult
Critical assessment of methods of protein structure prediction (CASP)-Round XIII. Proteins 87 (12) (2019)
Greg L Hura, Curtis D Hodge, Daniel Rosenberg, Dmytro Guzenko, Jose M Duarte, Bohdan Monastyrskyy, Sergei Grudinin, Andriy Kryshtafovych, John A Tainer, Krzysztof Fidelis, Susan E Tsutakawa
Small angle X-ray scattering-assisted protein structure prediction in CASP13 and emergence of solution structure differences. Proteins 87 (12) (2019)
Tadeusz L Ogorzalek, Greg L Hura, Adam Belsom, Kathryn H Burnett, Andriy Kryshtafovych, John A Tainer, Juri Rappsilber, Susan E Tsutakawa, Krzysztof Fidelis
Small angle X-ray scattering and cross-linking for data assisted protein structure prediction in CASP 12 with prospects for improved accuracy. Proteins (2018)
Andriy Kryshtafovych, Reinhard Albrecht, Arnaud Baslé, Pedro Bule, Alessandro T Caputo, Ana Luísa Carvalho, Kinlin L Chao, Ron Diskin, Krzysztof Fidelis, Carlos M G A Fontes, Folmer Fredslund, Harry J Gilbert, Celia W Goulding, Marcus D Hartmann, Christopher S Hayes, Osnat Herzberg, Johan C Hill, Andrzej Joachimiak, Gert-Wieland Kohring, Roman I Koning, Leila Lo Leggio, Marco Mangiagalli, Karolina Michalska, John Moult, Shabir Najmudin, Marco Nardini, Valentina Nardone, Didier Ndeh, Thanh-Hong Nguyen, Guido Pintacuda, Sandra Postel, Mark J van Raaij, Pietro Roversi, Amir Shimon, Abhimanyu K Singh, Eric John Sundberg, Kaspars Tars, Nicole Zitzmann, Torsten Schwede
Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016). Proteins (2017)
John Moult, Krzysztof Fidelis, Andriy Kryshtafovych, Torsten Schwede
A tribute to Anna Tramontano (1957-2017). Proteins (2017)
Andriy Kryshtafovych, Bohdan Monastyrskyy, Krzysztof Fidelis, John Moult, Torsten Schwede, Anna Tramontano
Evaluation of the template-based modeling in CASP12. Proteins (2017)
John Moult, Krzysztof Fidelis, Andriy Kryshtafovych, Torsten Schwede, Anna Tramontano
Critical assessment of methods of protein structure prediction (CASP)-Round XII. Proteins (2017)