Roman Jerala

ResearcherID Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 60

Top Venues

Nature communications

ACS synthetic biology

Nature chemical biology

Scientific reports

Kemijski institut

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Kemijski institut

Slovenia

head :: Synthetic Biology and Immunology

Publications

Tjaša Plaper, Estera Merljak, Tina Fink, Tadej Satler, Ajasja Ljubetič, Duško Lainšček, Vid Jazbec, Mojca Benčina, Sintija Stevanoska, Sašo Džeroski, Roman Jerala
Designed allosteric protein logic. Cell discovery 10 (1) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Subunits of an E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear, and Membrane Proteins. ACS synthetic biology 13 (3) (2024)
Filip Ivanovski, Maja Meško, Tina Lebar, Marko Rupnik, Duško Lainšček, Miha Gradišek, Roman Jerala, Mojca Benčina
Ultrasound-mediated spatial and temporal control of engineered cells in vivo. Nature communications 15 (1) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Subunits of an E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear, and Membrane Proteins. ACS synthetic biology (2024)
Jaka Snoj, Fabio Lapenta, Roman Jerala
Preorganized cyclic modules facilitate the self-assembly of protein nanostructures. Chemical science 15 (10) (2024)
Tjaša Plaper, Estera Merljak, Tina Fink, Tadej Satler, Ajasja Ljubetič, Duško Lainšček, Vid Jazbec, Mojca Benčina, Sintija Stevanoska, Sašo Džeroski, Roman Jerala
Designed allosteric protein logic. Cell discovery 10 (1) (2024)
Jaka Snoj, Fabio Lapenta, Roman Jerala
Preorganized cyclic modules facilitate the self-assembly of protein nanostructures. Chemical science 15 (10) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Subunits of an E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear, and Membrane Proteins. ACS synthetic biology 13 (3) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Correction to Subunits of E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear and Membrane Proteins. ACS synthetic biology 13 (5) (2024)
Vid Jazbec, Nina Varda, Ernest Šprager, Maja Meško, Sara Vidmar, Rok Romih, Marjetka Podobnik, Andreja Kežar, Roman Jerala, Mojca Benčina
Protein Gas Vesicles of Bacillus megaterium as Enhancers of Ultrasound-Induced Transcriptional Regulation. ACS nano 18 (26) (2024)
Fei Xiao, Longfei Luo, Xin Liu, Ajasja Ljubetič, Nengzhi Jin, Roman Jerala, Guang Hu
Comparative Simulative Analysis and Design of Single-Chain Self-Assembled Protein Cages. The journal of physical chemistry. B (2024)
Filip Ivanovski, Maja Meško, Tina Lebar, Marko Rupnik, Duško Lainšček, Miha Gradišek, Roman Jerala, Mojca Benčina
Ultrasound-mediated spatial and temporal control of engineered cells in vivo. Nature communications 15 (1) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Subunits of an E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear, and Membrane Proteins. ACS synthetic biology 13 (3) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Subunits of an E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear, and Membrane Proteins. ACS synthetic biology 13 (3) (2024)
Vid Jazbec, Nina Varda, Ernest Šprager, Maja Meško, Sara Vidmar, Rok Romih, Marjetka Podobnik, Andreja Kežar, Roman Jerala, Mojca Benčina
Protein Gas Vesicles of Bacillus megaterium as Enhancers of Ultrasound-Induced Transcriptional Regulation. ACS nano 18 (26) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Subunits of an E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear, and Membrane Proteins. ACS synthetic biology 13 (3) (2024)
Fei Xiao, Longfei Luo, Xin Liu, Ajasja Ljubetič, Nengzhi Jin, Roman Jerala, Guang Hu
Comparative Simulative Analysis and Design of Single-Chain Self-Assembled Protein Cages. The journal of physical chemistry. B 128 (26) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Correction to Subunits of E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear and Membrane Proteins. ACS synthetic biology 13 (5) (2024)
Vid Jazbec, Nina Varda, Ernest Šprager, Maja Meško, Sara Vidmar, Rok Romih, Marjetka Podobnik, Andreja Kežar, Roman Jerala, Mojca Benčina
Protein Gas Vesicles of Bacillus megaterium as Enhancers of Ultrasound-Induced Transcriptional Regulation. ACS nano 18 (26) (2024)
Tjaša Plaper, Estera Merljak, Tina Fink, Tadej Satler, Ajasja Ljubetič, Duško Lainšček, Vid Jazbec, Mojca Benčina, Sintija Stevanoska, Sašo Džeroski, Roman Jerala
Designed allosteric protein logic. Cell discovery 10 (1) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Correction to Subunits of E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear and Membrane Proteins. ACS synthetic biology 13 (5) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Subunits of an E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear, and Membrane Proteins. ACS synthetic biology 13 (3) (2024)
Anže Verbič, Tina Lebar, Arne Praznik, Roman Jerala
Correction to Subunits of E3 Ligase Complex as Degrons for Efficient Degradation of Cytosolic, Nuclear and Membrane Proteins. ACS synthetic biology (2024)
Estera Merljak, Benjamin Malovrh, Roman Jerala
Segmentation strategy of de novo designed four-helical bundles expands protein oligomerization modalities for cell regulation. Nature communications 14 (1) (2023)
Maruša Ramšak, Dominique A Ramirez, Loren E Hough, Michael R Shirts, Sara Vidmar, Kristina Eleršič Filipič, Gregor Anderluh, Roman Jerala
Programmable de novo designed coiled coil-mediated phase separation in mammalian cells. Nature communications 14 (1) (2023)
Tadej Satler, San Hadži, Roman Jerala
Crystal Structure of de Novo Designed Coiled-Coil Protein Origami Triangle. Journal of the American Chemical Society (2023)
Anna-Maria Makri Pistikou, Glenn A O Cremers, Bryan L Nathalia, Theodorus J Meuleman, Bas W A Bögels, Bruno V Eijkens, Anne de Dreu, Maarten T H Bezembinder, Oscar M J A Stassen, Carlijn V C Bouten, Maarten Merkx, Roman Jerala, Tom F A de Greef
Engineering a scalable and orthogonal platform for synthetic communication in mammalian cells. Nature communications 14 (1) (2023)
W Clifford Boldridge, Ajasja Ljubetič, Hwangbeom Kim, Nathan Lubock, Dániel Szilágyi, Jonathan Lee, Andrej Brodnik, Roman Jerala, Sriram Kosuri
A multiplexed bacterial two-hybrid for rapid characterization of protein-protein interactions and iterative protein design. Nature communications 14 (1) (2023)
Mojca Pavlin, Jasna Lojk, Klemen Strojan, Iva Hafner Bratkovič, Roman Jerala, Adrijana Leonardi, Igor Križaj, Nataša Drnovšek, Saša Novak, Peter Veranič, Vladimir Boštjan Bregar
The Relevance of Physico-Chemical Properties and Protein Corona for Evaluation of Nanoparticles Immunotoxicity-In Vitro Correlation Analysis on THP-1 Macrophages. International journal of molecular sciences 23 (11) (2022)
Arne Praznik, Tina Fink, Nik Franko, Jan Lonzarić, Mojca Benčina, Nina Jerala, Tjaša Plaper, Samo Roškar, Roman Jerala
Regulation of protein secretion through chemical regulation of endoplasmic reticulum retention signal cleavage. Nature communications 13 (1) (2022)
Duško Lainšček, Vida Forstnerič, Veronika Mikolič, Špela Malenšek, Peter Pečan, Mojca Benčina, Matjaž Sever, Helena Podgornik, Roman Jerala
Coiled-coil heterodimer-based recruitment of an exonuclease to CRISPR/Cas for enhanced gene editing. Nature communications 13 (1) (2022)
Spela Mirosevic, Shivang Khandelwal, Petra Sušjan, Nina Žakelj, David Gosar, Vida Forstnerič, Duško Lainšček, Roman Jerala, Damjan Osredkar
Correlation between Phenotype and Genotype in CTNNB1 Syndrome: A Systematic Review of the Literature. International journal of molecular sciences 23 (20) (2022)
Jana Aupič, Fabio Lapenta, Žiga Strmšek, Estera Merljak, Tjaša Plaper, Roman Jerala
Metal ion-regulated assembly of designed modular protein cages. Science advances 8 (24) (2022)
Katja Leben, Žiga Strmšek, Tina Lebar, Anže Verbič, Matej Dragovan, Neža Omersa, Gregor Anderluh, Roman Jerala
Binding of the transcription activator-like effector augments transcriptional regulation by another transcription factor. Nucleic acids research 50 (11) (2022)
Fabio Lapenta, Jana Aupič, Marco Vezzoli, Žiga Strmšek, Stefano Da Vela, Dmitri I Svergun, José María Carazo, Roberto Melero, Roman Jerala
Self-assembly and regulation of protein cages from pre-organised coiled-coil modules. Nature communications 12 (1) (2021)
Jana Aupič, Žiga Strmšek, Fabio Lapenta, David Pahovnik, Tomaž Pisanski, Igor Drobnak, Ajasja Ljubetič, Roman Jerala
Designed folding pathway of modular coiled-coil-based proteins. Nature communications 12 (1) (2021)
Fabio Lapenta, Jana Aupič, Marco Vezzoli, Žiga Strmšek, Stefano Da Vela, Dmitri I Svergun, José María Carazo, Roberto Melero, Roman Jerala
Author Correction: Self-assembly and regulation of protein cages from pre-organised coiled-coil modules. Nature communications 12 (1) (2021)
Tina Lebar, Duško Lainšček, Estera Merljak, Jana Aupič, Roman Jerala
A tunable orthogonal coiled-coil interaction toolbox for engineering mammalian cells. Nature chemical biology 16 (5) (2020)
Weijun Zhou, Tamara Šmidlehner, Roman Jerala
Synthetic biology principles for the design of protein with novel structures and functions. FEBS letters 594 (14) (2020)
Anže Verbič, Arne Praznik, Roman Jerala
A guide to the design of synthetic gene networks in mammalian cells. The FEBS journal 288 (18) (2020)
Eran Segal, Feng Zhang, Xihong Lin, Gary King, Ophir Shalem, Smadar Shilo, William E Allen, Faisal Alquaddoomi, Han Altae-Tran, Simon Anders, Ran Balicer, Tal Bauman, Ximena Bonilla, Gisel Booman, Andrew T Chan, Ori Cohen, Silvano Coletti, Natalie Davidson, Yuval Dor, David A Drew, Olivier Elemento, Georgina Evans, Philip A Ewels, Joshua Gale, Amir Gavrieli, Benjamin Geiger, Yonatan Hagai Grad, Casey S Greene, Iman Hajirasouliha, Roman Jerala, Andre Kahles, Olli Kallioniemi, Ayya Keshet, Ljupco Kocarev, Gregory Landua, Tomer Meir, Aline Muller, Long H Nguyen, Matej Oresic, Svetlana Ovchinnikova, Hedi Peterson, Jana Prodanova, Jay Rajagopal, Gunnar Rätsch, Hagai Rossman, Johan Rung, Andrea Sboner, Alexandros Sigaras, Timothy D Spector, Ron Steinherz, Irene Stevens, Jaak Vilo, Paul Wilmes
Building an international consortium for tracking coronavirus health status. Nature medicine 26 (8) (2020)
Tina Fink, Bojana Stevović, René Verwaal, Johannes A Roubos, Rok Gaber, Mojca Benčina, Roman Jerala, Helena Gradišar
Metabolic enzyme clustering by coiled coils improves the biosynthesis of resveratrol and mevalonate. AMB Express 10 (1) (2020)
Lucija Kadunc, Maja Svetličič, Vida Forstnerič, Iva Hafner Bratkovič, Roman Jerala
Increased gene translation stringency in mammalian cells by nonsense suppression at multiple permissive sites with a single noncanonical amino acid. FEBS letters 594 (15) (2020)
Florent Cochet, Fabio A Facchini, Lenny Zaffaroni, Jean-Marc Billod, Helena Coelho, Aurora Holgado, Harald Braun, Rudi Beyaert, Roman Jerala, Jiménez-Barbero Jesús, Sonsoles Martin-Santamaria, Francesco Peri
Novel carboxylate-based glycolipids: TLR4 antagonism, MD-2 binding and self-assembly properties. Scientific reports 9 (1) (2019)
Anja Golob-Urbanc, Uroš Rajčević, Žiga Strmšek, Roman Jerala
Design of split superantigen fusion proteins for cancer immunotherapy. The Journal of biological chemistry 294 (16) (2019)
Fabio Alessandro Facchini, Lenny Zaffaroni, Alberto Minotti, Silvia Rapisarda, Valentina Calabrese, Matilde Forcella, Paola Fusi, Cristina Airoldi, Carlotta Ciaramelli, Jean-Marc Billod, Andra B Schromm, Harald Braun, Charys Palmer, Rudi Beyaert, Fabio Lapenta, Roman Jerala, Grisha Pirianov, Sonsoles Martin-Santamaria, Francesco Peri
Structure-Activity Relationship in Monosaccharide-Based Toll-Like Receptor 4 (TLR4) Antagonists. Journal of medicinal chemistry 61 (7) (2018)
Tina Lebar, Anže Verbič, Ajasja Ljubetič, Roman Jerala
Polarized displacement by transcription activator-like effectors for regulatory circuits. Nature chemical biology 15 (1) (2018)
Jana Aupič, Fabio Lapenta, Roman Jerala
SwitCCh: Metal-Site Design for Controlling the Assembly of a Coiled-Coil Homodimer. Chembiochem : a European journal of chemical biology 19 (23) (2018)
Mateja Manček-Keber, Duško Lainšček, Mojca Benčina, Steven P Treon, Rok Romih, Zachary R Hunter, Roman Jerala
Extracellular vesicle-mediated transfer of constitutively active MyD88L265P engages MyD88wt and activates signaling. Blood 131 (15) (2018)
Jelka Pohar, Duško Lainšček, Ana Kunšek, Miša-Mojca Cajnko, Roman Jerala, Mojca Benčina
Publisher Correction: Phosphodiester backbone of the CpG motif within immunostimulatory oligodeoxynucleotides augments activation of Toll-like receptor 9. Scientific reports 8 (1) (2018)
Tina Fink, Jan Lonzarić, Arne Praznik, Tjaša Plaper, Estera Merljak, Katja Leben, Nina Jerala, Tina Lebar, Žiga Strmšek, Fabio Lapenta, Mojca Benčina, Roman Jerala
Design of fast proteolysis-based signaling and logic circuits in mammalian cells. Nature chemical biology 15 (2) (2018)
Iva Hafner Bratkovič, Petra Sušjan, Duško Lainšček, Ana Tapia-Abellán, Kosta Cerović, Lucija Kadunc, Diego Angosto-Bazarra, Pablo Pelegrin, Roman Jerala
NLRP3 lacking the leucine-rich repeat domain can be fully activated via the canonical inflammasome pathway. Nature communications 9 (1) (2018)
Jelka Pohar, Duško Lainšček, Ana Kunšek, Miša-Mojca Cajnko, Roman Jerala, Mojca Benčina
Publisher Correction: Phosphodiester backbone of the CpG motif within immunostimulatory oligodeoxynucleotides augments activation of Toll-like receptor 9. Scientific reports 8 (1) (2018)
Fabio Lapenta, Jana Aupič, Žiga Strmšek, Roman Jerala
Coiled coil protein origami: from modular design principles towards biotechnological applications. Chemical Society reviews 47 (10) (2018)
Vida Forstnerič, Karolina Ivičak-Kocjan, Tjaša Plaper, Roman Jerala, Mojca Benčina
The role of the C-terminal D0 domain of flagellin in activation of Toll like receptor 5. PLoS pathogens 13 (8) (2017)
Jelka Pohar, Duško Lainšček, Ana Kunšek, Miša-Mojca Cajnko, Roman Jerala, Mojca Benčina
Phosphodiester backbone of the CpG motif within immunostimulatory oligodeoxynucleotides augments activation of Toll-like receptor 9. Scientific reports 7 (1) (2017)
Ajasja Ljubetič, Fabio Lapenta, Helena Gradišar, Igor Drobnak, Jana Aupič, Žiga Strmšek, Duško Lainšček, Iva Hafner-Bratkovič, Andreja Majerle, Nuša Krivec, Mojca Benčina, Tomaž Pisanski, Tanja Ćirković Veličković, Adam Round, José María Carazo, Roberto Melero, Roman Jerala
Design of coiled-coil protein-origami cages that self-assemble in vitro and in vivo. Nature biotechnology 35 (11) (2017)
Jelka Pohar, Duško Lainšček, Karolina Ivičak-Kocjan, Miša-Mojca Cajnko, Roman Jerala, Mojca Benčina
Short single-stranded DNA degradation products augment the activation of Toll-like receptor 9. Nature communications 8 (2017)
Igor Drobnak, Helena Gradišar, Ajasja Ljubetič, Estera Merljak, Roman Jerala
Modulation of Coiled-Coil Dimer Stability through Surface Residues while Preserving Pairing Specificity. Journal of the American Chemical Society 139 (24) (2017)
Vid Kočar, John S Schreck, Slavko Čeru, Helena Gradišar, Nino Bašić, Tomaž Pisanski, Jonathan P K Doye, Roman Jerala
Design principles for rapid folding of knotted DNA nanostructures. Nature communications 7 (2016)
Rok Gaber, Tina Lebar, Andreja Majerle, Branko Šter, Andrej Dobnikar, Mojca Benčina, Roman Jerala
Designable DNA-binding domains enable construction of logic circuits in mammalian cells. Nature chemical biology 10 (3) (2014)

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Publication Activity (10 Years)

Top Topics

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Roman Jerala