Stephen C Ekker

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 25

Top Venues

eLife

International journal of molecular sciences

bioRxiv : the preprint server for biology

Nature communications

Mayo Clinic

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Mayo Clinic Jul 01 2007

United States

Dean and Professor :: Biochemistry and Molecular Biology

Publications

Santiago R Castillo, Brandon W Simone, Karl J Clark, Patricia Devaux, Stephen C Ekker
Unconstrained Precision Mitochondrial Genome Editing with αDdCBEs. bioRxiv : the preprint server for biology (2024)
Santiago R Castillo, Brandon W Simone, Karl J Clark, Patricia Devaux, Stephen C Ekker
Unconstrained Precision Mitochondrial Genome Editing with αDdCBEs. bioRxiv : the preprint server for biology (2024)
Bibekananda Kar, Santiago R Castillo, Ankit Sabharwal, Karl J Clark, Stephen C Ekker
Mitochondrial Base Editing: Recent Advances towards Therapeutic Opportunities. International journal of molecular sciences 24 (6) (2023)
Bibekananda Kar, Santiago R Castillo, Ankit Sabharwal, Karl J Clark, Stephen C Ekker
Mitochondrial Base Editing: Recent Advances towards Therapeutic Opportunities. International journal of molecular sciences 24 (6) (2023)
Bibekananda Kar, Santiago R Castillo, Ankit Sabharwal, Karl J Clark, Stephen C Ekker
Mitochondrial Base Editing: Recent Advances towards Therapeutic Opportunities. International journal of molecular sciences 24 (6) (2023)
Meredith H Wilson, Stephen C Ekker, Steven Arthur Farber
Correction: Imaging cytoplasmic lipid droplets in vivo with fluorescent perilipin 2 and perilipin 3 knock-in zebrafish. eLife 12 (2023)
Yong-He Ding, Di Lang, Jianhua Yan, Haisong Bu, Hongsong Li, Kunli Jiao, Jingchun Yang, Haibo Ni, Stefano Morotti, Tai Le, Karl J Clark, Jenna Port, Stephen C Ekker, Hung Cao, Yuji Zhang, Jun Wang, Eleonora Grandi, Zhiqiang Li, Yongyong Shi, Yigang Li, Alexey V Glukhov, Xiaolei Xu
A phenotype-based forward genetic screen identifies <i>Dnajb6</i> as a sick sinus syndrome gene. eLife 11 (2022)
Fang Liu, Sekhar Kambakam, Maira P Almeida, Zhitao Ming, Jordan M Welker, Wesley A Wierson, Laura E Schultz-Rogers, Stephen C Ekker, Karl J Clark, Jeffrey J Essner, Maura McGrail
Cre/ lox regulated conditional rescue and inactivation with zebrafish UFlip alleles generated by CRISPR-Cas9 targeted integration. eLife 11 (2022)
Ankit Sabharwal, Jarryd M Campbell, Tanya L Schwab, Zachary WareJoncas, Mark D Wishman, Hirotaka Ata, Wiebin Liu, Noriko Ichino, Danielle E Hunter, Jake D Bergren, Mark D Urban, Rhianna M Urban, Shannon R Holmberg, Bibekananda Kar, Alex Cook, Yonghe Ding, Xiaolei Xu, Karl J Clark, Stephen C Ekker
A Primer Genetic Toolkit for Exploring Mitochondrial Biology and Disease Using Zebrafish. Genes 13 (8) (2022)
Ankit Sabharwal, Mark D Wishman, Roberto Lopez Cervera, MaKayla R Serres, Jennifer L Anderson, Shannon R Holmberg, Bibekananda Kar, Anthony J Treichel, Noriko Ichino, Weibin Liu, Jingchun Yang, Yonghe Ding, Yun Deng, Jean M Lacey, William J Laxen, Perry R Loken, Devin Oglesbee, Steven Arthur Farber, Karl J Clark, Xiaolei Xu, Stephen C Ekker
Genetic therapy in a mitochondrial disease model suggests a critical role for liver dysfunction in mortality. eLife 11 (2022)
Krishanu Saha, Erik J Sontheimer, P J Brooks, Melinda R Dwinell, Charles A Gersbach, David R Liu, Stephen A Murray, Shengdar Q Tsai, Ross C Wilson, Daniel G Anderson, Aravind Asokan, Jillian F Banfield, Krystof S Bankiewicz, Gang Bao, Jeff W M Bulte, Nenad Bursac, Jarryd M Campbell, Daniel F Carlson, Elliot L Chaikof, Zheng-Yi Chen, R Holland Cheng, Karl J Clark, David T Curiel, James E Dahlman, Benjamin E Deverman, Mary E Dickinson, Jennifer A Doudna, Stephen C Ekker, Marina E Emborg, Guoping Feng, Benjamin S Freedman, David M Gamm, Guangping Gao, Ionita C Ghiran, Peter M Glazer, Shaoqin Gong, Jason D Heaney, Jon D Hennebold, John T Hinson, Anastasia Khvorova, Samira Kiani, William R Lagor, Kit S Lam, Kam W Leong, Jon E Levine, Jennifer A Lewis, Cathleen M Lutz, Danith H Ly, Samantha Maragh, Paul B McCray, Todd C McDevitt, Oleg Mirochnitchenko, Ryuji Morizane, Niren Murthy, Randall S Prather, John A Ronald, Subhojit Roy, Sushmita Roy, Venkata Sabbisetti, W Mark Saltzman, Philip J Santangelo, David J Segal, Mary Shimoyama, Melissa C Skala, Alice F Tarantal, John C Tilton, George A Truskey, Moriel Vandsburger, Jonathan K Watts, Kevin D Wells, Scot A Wolfe, Qiaobing Xu, Wen Xue, Guohua Yi, Jiangbing Zhou, null null
The NIH Somatic Cell Genome Editing program. Nature 592 (7853) (2021)
Ankit Sabharwal, Bibekananda Kar, Santiago R Castillo, Shannon R Holmberg, Neal D Mathew, Benjamin Luke Kendall, Ryan P Cotter, Zachary WareJoncas, Christoph Seiler, Eiko Nakamaru-Ogiso, Karl J Clark, Stephen C Ekker
The FusX TALE Base Editor (FusXTBE) for Rapid Mitochondrial DNA Programming of Human Cells In Vitro and Zebrafish Disease Models In Vivo. The CRISPR journal (2021)
Joanna Yang Yowler, Kit Knier, Zachary WareJoncas, Shawna L Ehlers, Stephen C Ekker, Fabiola Guasp Reyes, Bruce F Horazdovsky, Glenda Mueller, Adriana Morales Gomez, Amit Sood, Caroline R Sussman, Linda M Scholl, Karen M Weavers, Chris Pierret
Rapid adaptation and remote delivery of undergraduate research training during the COVID 19 Pandemic. bioRxiv : the preprint server for biology (2021)
Meredith H Wilson, Stephen C Ekker, Steven Arthur Farber
Imaging cytoplasmic lipid droplets in vivo with fluorescent perilipin 2 and perilipin 3 knock-in zebrafish. eLife 10 (2021)
Wesley A Wierson, Jordan M Welker, Maira P Almeida, Carla M Mann, Dennis A Webster, Melanie E Torrie, Trevor J Weiss, Sekhar Kambakam, Macy K Vollbrecht, Merrina Lan, Kenna C McKeighan, Jacklyn Levey, Zhitao Ming, Alec Wehmeier, Christopher S Mikelson, Jeffrey A Haltom, Kristen M Kwan, Chi-Bin Chien, Darius Balciunas, Stephen C Ekker, Karl J Clark, Beau R Webber, Branden S Moriarity, Stacy L Solin, Daniel F Carlson, Drena L Dobbs, Maura McGrail, Jeffrey J Essner
Efficient targeted integration directed by short homology in zebrafish and mammalian cells. eLife 9 (2020)
Noriko Ichino, MaKayla R Serres, Rhianna M Urban, Mark D Urban, Anthony J Treichel, Kyle J Schaefbauer, Lauren E Greif, Guarav K Varshney, Kimberly J Skuster, Melissa S McNulty, Camden L Daby, Ying Wang, Hsin-Kai Liao, Suzan El-Rass, Yonghe Ding, Weibin Liu, Jennifer L Anderson, Mark D Wishman, Ankit Sabharwal, Lisa A Schimmenti, Sridhar Sivasubbu, Darius Balciunas, Matthias Hammerschmidt, Steven Arthur Farber, Xiao-Yan Wen, Xiaolei Xu, Maura McGrail, Jeffrey J Essner, Jason W Sinclair, Karl J Clark, Stephen C Ekker
Building the vertebrate codex using the gene breaking protein trap library. eLife 9 (2020)
James H Thierer, Stephen C Ekker, Steven Arthur Farber
Author Correction: The LipoGlo reporter system for sensitive and specific monitoring of atherogenic lipoproteins. Nature communications 11 (1) (2020)
Alaa Koleilat, Joseph A Dugdale, Trace A Christenson, Jeffrey L Bellah, Aaron M Lambert, Mark A Masino, Stephen C Ekker, Lisa A Schimmenti
L-type voltage-gated calcium channel agonists mitigate hearing loss and modify ribbon synapse morphology in the zebrafish model of Usher syndrome type 1. Disease models & mechanisms 13 (11) (2020)
Xiao Ma, Ping Zhu, Yonghe Ding, Hong Zhang, Qi Qiu, Alexey V Dvornikov, Zheng Wang, Maengjo Kim, Yong Wang, Matthew R Lowerison, Yue Yu, Nadine Norton, Joerg Herrmann, Stephen C Ekker, Tzung K Hsiai, Xueying Lin, Xiaolei Xu
Retinoid X receptor alpha is a spatiotemporally predominant therapeutic target for anthracycline-induced cardiotoxicity. Science advances 6 (5) (2020)
James H Thierer, Stephen C Ekker, Steven Arthur Farber
The LipoGlo reporter system for sensitive and specific monitoring of atherogenic lipoproteins. Nature communications 10 (1) (2019)
Noriko Ichino, Stephen C Ekker
Taking a closer look at whole organisms. eLife 8 (2019)
Hirotaka Ata, Thomas L Ekstrom, Gabriel Martínez-Gálvez, Carla M Mann, Alexey V Dvornikov, Kyle J Schaefbauer, Alvin C Ma, Drena Dobbs, Karl J Clark, Stephen C Ekker
Robust activation of microhomology-mediated end joining for precision gene editing applications. PLoS genetics 14 (9) (2018)
Seung Hwan Lee, Giandomenico Turchiano, Hirotaka Ata, Somaira Nowsheen, Marianna Romito, Zhenkun Lou, Seuk-Min Ryu, Stephen C Ekker, Toni Cathomen, Jin-Soo Kim
Failure to detect DNA-guided genome editing using Natronobacterium gregoryi Argonaute. Nature biotechnology 35 (1) (2018)
Jennifer M Reiman, Biswadeep Das, Gregory M Sindberg, Mark D Urban, Madeleine E M Hammerlund, Han B Lee, Katie M Spring, Jamie Lyman-Gingerich, Alex R Generous, Tyler H Koep, Kevin Ewing, Phil Lilja, Felicity T Enders, Stephen C Ekker, W Charles Huskins, Hind J Fadel, Chris Pierret
Humidity as a non-pharmaceutical intervention for influenza A. PloS one 13 (9) (2018)
Myron S Ignatius, Madeline N Hayes, Finola E Moore, Qin Tang, Sara P Garcia, Patrick R Blackburn, Kunal Baxi, Long Wang, Alexander Jin, Ashwin Ramakrishnan, Sophia Reeder, Yidong Chen, Gunnlaugur Petur Nielsen, Eleanor Y Chen, Robert P Hasserjian, Franck Tirode, Stephen C Ekker, David M Langenau
tp53 deficiency causes a wide tumor spectrum and increases embryonal rhabdomyosarcoma metastasis in zebrafish. eLife 7 (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Stephen C Ekker