Steven James Hallam (Steven J Hallam)

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 29

Top Topics

Microbial Community

Electron Transfer

Top Venues

The ISME journal

Microbiology resource announcements

Nature communications

ACS applied bio materials

This page only lists publications with an associated author ORCID identifier.

Publications

Nicholas Lin, Alireza Taghizadehmakoei, Lorena Polovina, Isobel McLean, Juan C Santana-Martínez, Chloe Naese, Christopher Moraes, Steven James Hallam, Joseph Dahmen
3D Bioprinting of Food Grade Hydrogel Infused with Living Pleurotus ostreatus Mycelium in Non-sterile Conditions. ACS applied bio materials 7 (5) (2024)
Nicholas Lin, Alireza Taghizadehmakoei, Lorena Polovina, Isobel McLean, Juan C Santana-Martínez, Chloe Naese, Christopher Moraes, Steven James Hallam, Joseph Dahmen
3D Bioprinting of Food Grade Hydrogel Infused with Living Pleurotus ostreatus Mycelium in Non-sterile Conditions. ACS applied bio materials (2024)
Nicholas Lin, Alireza Taghizadehmakoei, Lorena Polovina, Isobel McLean, Juan C Santana-Martínez, Chloe Naese, Christopher Moraes, Steven James Hallam, Joseph Dahmen
3D Bioprinting of Food Grade Hydrogel Infused with Living Pleurotus ostreatus Mycelium in Non-sterile Conditions. ACS applied bio materials 7 (5) (2024)
Brandon Kieft, Niko Finke, Ryan J McLaughlin, Aditi N Nallan, Martin Krzywinski, Sean A Crowe, Steven James Hallam
Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater. Nature communications 14 (1) (2023)
Yilin Qiu, Avery J C Noonan, Kalen Dofher, Moritz Koch, Brandon Kieft, Xuan Lin, Ryan M Ziels, Steven James Hallam
Complete Genome Sequence of Phormidium yuhuli AB48, Isolated from an Industrial Photobioreactor Environment. Microbiology resource announcements 12 (2) (2023)
Elizabeth A McDaniel, Matthew Scarborough, Daniel Girma Mulat, Xuan Lin, Pranav S Sampara, Heather M Brewer, Robert P Young, Elizabeth K Eder, Isaac K Attah, Lye Meng Markillie, David W Hoyt, Mary S Lipton, Steven James Hallam, Ryan M Ziels
Diverse electron carriers drive syntrophic interactions in an enriched anaerobic acetate-oxidizing consortium. The ISME journal (2023)
Yilin Qiu, Avery J C Noonan, Kalen Dofher, Moritz Koch, Brandon Kieft, Xuan Lin, Ryan M Ziels, Steven James Hallam
Complete Genome Sequence of Phormidium yuhuli AB48, Isolated from an Industrial Photobioreactor Environment. Microbiology resource announcements 12 (2) (2023)
Brandon Kieft, Niko Finke, Ryan J McLaughlin, Aditi N Nallan, Martin Krzywinski, Sean A Crowe, Steven James Hallam
Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater. Nature communications 14 (1) (2023)
Yilin Qiu, Avery J C Noonan, Kalen Dofher, Moritz Koch, Brandon Kieft, Xuan Lin, Ryan M Ziels, Steven James Hallam
Complete Genome Sequence of Phormidium yuhuli AB48, Isolated from an Industrial Photobioreactor Environment. Microbiology resource announcements 12 (2) (2023)
Yilin Qiu, Avery J C Noonan, Kalen Dofher, Moritz Koch, Brandon Kieft, Xuan Lin, Ryan M Ziels, Steven James Hallam
Complete Genome Sequence of Phormidium yuhuli AB48, Isolated from an Industrial Photobioreactor Environment. Microbiology resource announcements (2023)
Julia Anstett, Alvaro M Plominsky, Edward F DeLong, Alyse Kiesser, Klaus Jürgens, Connor Morgan-Lang, Ramunas Stepanauskas, Frank J Stewart, Osvaldo Ulloa, Tanja Woyke, Rex R Malmstrom, Steven James Hallam
A compendium of bacterial and archaeal single-cell amplified genomes from oxygen deficient marine waters. Scientific data 10 (1) (2023)
Ya-Fei Ou, Hong-Po Dong, Simon J McIlroy, Sean A Crowe, Steven James Hallam, Ping Han, Jens Kallmeyer, Rachel L Simister, Aurèle Vuillemin, Andy O Leu, Zhanfei Liu, Yan-Ling Zheng, Qian-Li Sun, Min Liu, Gene W Tyson, Li-Jun Hou
Expanding the phylogenetic distribution of cytochrome b-containing methanogenic archaea sheds light on the evolution of methanogenesis. The ISME journal 16 (10) (2022)
Grayson L Chadwick, Connor T Skennerton, Rafael Laso-Pérez, Andy O Leu, Daan R Speth, Hang Yu, Connor Morgan-Lang, Roland Hatzenpichler, Danielle Goudeau, Rex R Malmstrom, William J Brazelton, Tanja Woyke, Steven James Hallam, Gene W Tyson, Gunter Wegener, Antje Boetius, Victoria J Orphan
Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea. PLoS biology 20 (1) (2022)
Avery J C Noonan, Yilin Qiu, Brandon Kieft, Sean Formby, Tony Liu, Kalen Dofher, Moritz Koch, Steven James Hallam
Metagenome-Assembled Genomes for " Candidatus Phormidium sp. Strain AB48" and Co-occurring Microorganisms from an Industrial Photobioreactor Environment. Microbiology resource announcements (2022)
Beth Davenport, Steven James Hallam
Emerging enzyme surface display systems for waste resource recovery. Environmental microbiology (2022)
Sachia J Traving, Colleen T E Kellogg, Tetjana Ross, Ryan McLaughlin, Brandon Kieft, Grace Y Ho, Angelica Peña, Martin Krzywinski, Marie Robert, Steven James Hallam
Prokaryotic responses to a warm temperature anomaly in northeast subarctic Pacific waters. Communications biology 4 (1) (2021)
Kristopher Kieft, Zhichao Zhou, Rika E Anderson, Alison Buchan, Barbara J Campbell, Steven James Hallam, Matthias Hess, Matthew B Sullivan, David A Walsh, Simon Roux, Karthik Anantharaman
Ecology of inorganic sulfur auxiliary metabolism in widespread bacteriophages. Nature communications 12 (1) (2021)
Heyu Lin, David B Ascher, Yoochan Myung, Carl H Lamborg, Steven James Hallam, Caitlin M Gionfriddo, Kathryn E Holt, John W Moreau
Mercury methylation by metabolically versatile and cosmopolitan marine bacteria. The ISME journal 15 (6) (2021)
Simon Roux, Blair G Paul, Sarah C Bagby, Stephen Nayfach, Michelle A Allen, Graeme Attwood, Ricardo Cavicchioli, Ludmila Chistoserdova, Robert J Gruninger, Steven James Hallam, Maria E Hernandez, Matthias Hess, Wen-Tso Liu, Tim A McAllister, Michelle A OʼMalley, Xuefeng Peng, Virginia I Rich, Scott R Saleska, Emiley A Eloe-Fadrosh
Ecology and molecular targets of hypermutation in the global microbiome. Nature communications 12 (1) (2021)
Kimberly A Dill-McFarland, Stephan G König, Florent Mazel, David C Oliver, Lisa M McEwen, Kris Y Hong, Steven James Hallam
An integrated, modular approach to data science education in microbiology. PLoS computational biology 17 (2) (2021)
Abdur Rahman M A Basher, Ryan J McLaughlin, Steven James Hallam
Metabolic pathway inference using multi-label classification with rich pathway features. PLoS computational biology 16 (10) (2020)
Maria Consuelo Gazitúa, Dean R Vik, Simon Roux, Ann C Gregory, Benjamin Bolduc, Brittany Widner, Margaret R Mulholland, Steven James Hallam, Osvaldo Ulloa, Matthew B Sullivan
Potential virus-mediated nitrogen cycling in oxygen-depleted oceanic waters. The ISME journal 15 (4) (2020)
Guillaume Borrel, Panagiotis S Adam, Luke J McKay, Lin-Xing Chen, Isabel Natalia Sierra-García, Christian M K Sieber, Quentin Letourneur, Amine Ghozlane, Gary L Andersen, Wen-Jun Li, Steven James Hallam, Gerard Muyzer, Valéria Maia de Oliveira, William P Inskeep, Jillian F Banfield, Simonetta Gribaldo
Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea. Nature microbiology 4 (4) (2019)
Peter Rahfeld, Lyann Sim, Haisle Moon, Iren Constantinescu, Connor Morgan-Lang, Steven James Hallam, Jayachandran N Kizhakkedathu, Stephen G Withers
An enzymatic pathway in the human gut microbiome that converts A to universal O type blood. Nature microbiology 4 (9) (2019)
David J Levy-Booth, Ian J W Giesbrecht, Colleen T E Kellogg, Thierry J Heger, David V D'Amore, Patrick J Keeling, Steven James Hallam, William W Mohn
Seasonal and ecohydrological regulation of active microbial populations involved in DOC, CO2, and CH4 fluxes in temperate rainforest soil. The ISME journal 13 (4) (2018)
Zach W B Armstrong, Keith Mewis, Feng Liu, Connor Morgan-Lang, Melanie Scofield, Evan Durno, Hong Ming Chen, Kevin Mehr, Stephen G Withers, Steven James Hallam
Metagenomics reveals functional synergy and novel polysaccharide utilization loci in the Castor canadensis fecal microbiome. The ISME journal 12 (11) (2018)
Maria G Pachiadaki, Eva Sintes, Kristin Bergauer, Julia M Brown, Nicholas R Record, Brandon K Swan, Mary Elizabeth Mathyer, Steven James Hallam, Purificacion Lopez-Garcia, Yoshihiro Takaki, Takuro Nunoura, Tanja Woyke, Gerhard J Herndl, Ramunas Stepanauskas
Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation. Science (New York, N.Y.) 358 (6366) (2018)
Jürgen F H Strassert, Anna Karnkowska, Elisabeth Hehenberger, Javier Del Campo, Martin Kolisko, Noriko Okamoto, Fabien Burki, Jan Janouškovec, Camille Poirier, Guy Leonard, Steven James Hallam, Thomas A Richards, Alexandra Z Worden, Alyson E Santoro, Patrick J Keeling
Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates. The ISME journal 12 (1) (2017)
Alyse K Hawley, Masaru K Nobu, Jody J Wright, W Evan Durno, Connor Morgan-Lang, Brent Sage, Patrick Schwientek, Brandon K Swan, Christian Rinke, Monica Torres-Beltrán, Keith Mewis, Wen-Tso Liu, Ramunas Stepanauskas, Tanja Woyke, Steven James Hallam
Diverse Marinimicrobia bacteria may mediate coupled biogeochemical cycles along eco-thermodynamic gradients. Nature communications 8 (1) (2017)