Yanxiao Zhang

ORCID

Publication Activity (10 Years)

Years Active: 2018-2021
Publications (10 Years): 11

Top Venues

Nature methods

Nature genetics

Nature communications

Science advances

Ludwig Institute for Cancer Research

University of Michigan (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Ludwig Institute for Cancer Research

United States

postdoc

Education History

University of Michigan Sep 01 2010 - Apr 29 2016

United States

PHD :: Bioinformatics

Peking University

China

BSC :: Biology

Publications

Chenxu Zhu, Yanxiao Zhang, Yang Eric Li, Jacinta Lucero, M Margarita Behrens, Bing Ren
Joint profiling of histone modifications and transcriptome in single cells from mouse brain. Nature methods 18 (3) (2021)
Rongxin Fang, Sebastian Preissl, Yang Li, Xiaomeng Hou, Jacinta Lucero, Xinxin Wang, Amir Motamedi, Andrew K Shiau, Xinzhu Zhou, Fangming Xie, Eran A Mukamel, Kai Zhang, Yanxiao Zhang, M Margarita Behrens, Joseph R Ecker, Bing Ren
Comprehensive analysis of single cell ATAC-seq data with SnapATAC. Nature communications 12 (1) (2021)
James D Hocker, Olivier B Poirion, Fugui Zhu, Justin Buchanan, Kai Zhang, Joshua Chiou, Tsui-Min Wang, Qingquan Zhang, Xiaomeng Hou, Yang Eric Li, Yanxiao Zhang, Elie N Farah, Allen Wang, Andrew D McCulloch, Kyle J Gaulton, Bing Ren, Neil C Chi, Sebastian Preissl
Cardiac cell type-specific gene regulatory programs and disease risk association. Science advances 7 (20) (2021)
Hui Huang, Quan Zhu, Adam Jussila, Yuanyuan Han, Bogdan Bintu, Colin Kern, Mattia Conte, Yanxiao Zhang, Simona Bianco, Andrea Maria Chiariello, Miao Yu, Rong Hu, Melodi Tastemel, Ivan Juric, Ming Hu, Mario Nicodemi, Xiaowei Zhuang, Bing Ren
CTCF mediates dosage- and sequence-context-dependent transcriptional insulation by forming local chromatin domains. Nature genetics 53 (7) (2021)
Miao Yu, Armen Abnousi, Yanxiao Zhang, Guoqiang Li, Lindsay Lee, Ziyin Chen, Rongxin Fang, Taylor M Lagler, Yuchen Yang, Jia Wen, Quan Sun, Yun Li, Bing Ren, Ming Hu
SnapHiC: a computational pipeline to identify chromatin loops from single-cell Hi-C data. Nature methods 18 (9) (2021)
Marios Arvanitis, Emmanouil Tampakakis, Yanxiao Zhang, Wei Wang, Adam Auton, null null, Diptavo Dutta, Stephanie A Glavaris, Ali R Keramati, Nilanjan Chatterjee, Neil C Chi, Bing Ren, Wendy S Post, Alexis J Battle
Genome-wide association and multi-omic analyses reveal ACTN2 as a gene linked to heart failure. Nature communications 11 (1) (2020)
Ivan Juric, Miao Yu, Armen Abnousi, Ramya Raviram, Rongxin Fang, Yuan Zhao, Yanxiao Zhang, Yunjiang Qiu, Yuchen Yang, Yun Li, Bing Ren, Ming Hu
MAPS: Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments. PLoS computational biology 15 (4) (2019)
Guoqiang Li, Yaping Liu, Yanxiao Zhang, Naoki Kubo, Miao Yu, Rongxin Fang, Manolis Kellis, Bing Ren
Joint profiling of DNA methylation and chromatin architecture in single cells. Nature methods 16 (10) (2019)
Yanxiao Zhang, Ting Li, Sebastian Preissl, Maria Luisa Amaral, Jonathan D Grinstein, Elie N Farah, Eugin Destici, Yunjiang Qiu, Rong Hu, Ah Young Lee, Sora Chee, Kaiyue Ma, Zhen Ye, Quan Zhu, Hui Huang, Rongxin Fang, Leqian Yu, Juan Carlos Izpisua Belmonte, Jun Wu, Sylvia M Evans, Neil C Chi, Bing Ren
Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells. Nature genetics 51 (9) (2019)
Sebastian Preissl, Rongxin Fang, Hui Huang, Yuan Zhao, Ramya Raviram, David U Gorkin, Yanxiao Zhang, Brandon C Sos, Veena Afzal, Diane E Dickel, Samantha Kuan, Axel Visel, Len A Pennacchio, Kun Zhang, Bing Ren
Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation. Nature neuroscience 21 (3) (2018)
Tingting Qin, Yanxiao Zhang, Katie R Zarins, Tamara R Jones, Shama Virani, Lisa A Peterson, Jonathan B McHugh, Douglas Chepeha, Gregory T Wolf, Laura S Rozek, Maureen A Sartor
Expressed HNSCC variants by HPV-status in a well-characterized Michigan cohort. Scientific reports 8 (1) (2018)

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Publication Activity (10 Years)

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Yanxiao Zhang