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Ana Sofia F Oliveira (Sofia Oliveira, Ana Sofia Oliveira, A Sofia F Oliveira)

ORCID

Publication Activity (10 Years)

Years Active: 2021-2023
Publications (10 Years): 19

Top Venues

JACS Au

The international journal of high performance computing applications

Scientific reports

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

George H Hutchins, Claire E M Noble, H Adrian Bunzel, Christopher Williams, Paulina Dubiel, Sathish K N Yadav, Paul M Molinaro, Rob Barringer, Hector Blackburn, Benjamin J Hardy, Alice E Parnell, Charles Landau, Paul R Race, Thomas A A Oliver, Ronald L Koder, Matthew P Crump, Christiane Schaffitzel, Ana Sofia F Oliveira, Adrian J Mulholland, John Leslie Ross Anderson
An expandable, modular de novo protein platform for precision redox engineering. Proceedings of the National Academy of Sciences of the United States of America 120 (31) (2023)
H T Henry Chan, Ana Sofia F Oliveira, Christopher J Schofield, Adrian J Mulholland, Fernanda Duarte
Dynamical Nonequilibrium Molecular Dynamics Simulations Identify Allosteric Sites and Positions Associated with Drug Resistance in the SARS-CoV-2 Main Protease. JACS Au 3 (6) (2023)
H T Henry Chan, Ana Sofia F Oliveira, Christopher J Schofield, Adrian J Mulholland, Fernanda Duarte
Dynamical Nonequilibrium Molecular Dynamics Simulations Identify Allosteric Sites and Positions Associated with Drug Resistance in the SARS-CoV-2 Main Protease. JACS Au 3 (6) (2023)
Leonor Guerra-Guimarães, Carla Pinheiro, Ana Sofia F Oliveira, Andrea Mira-Jover, Javier Valverde, Fernanda Alves de Freitas Guedes, Herlander Azevedo, Vitor Várzea, Antonio Jesús Muñoz Pajares
Publisher Correction: The chloroplast protein HCF164 is predicted to be associated with Coffea S H 9 resistance factor against Hemileia vastatrix. Scientific reports 13 (1) (2023)
H T Henry Chan, Ana Sofia F Oliveira, Christopher J Schofield, Adrian J Mulholland, Fernanda Duarte
Dynamical Nonequilibrium Molecular Dynamics Simulations Identify Allosteric Sites and Positions Associated with Drug Resistance in the SARS-CoV-2 Main Protease. JACS Au 3 (6) (2023)
Ana Sofia F Oliveira, Deborah K Shoemark, Andrew D Davidson, Imre Berger, Christiane Schaffitzel, Adrian J Mulholland
SARS-CoV-2 spike variants differ in their allosteric response to linoleic acid. Journal of molecular cell biology (2023)
H T Henry Chan, Ana Sofia F Oliveira, Christopher J Schofield, Adrian J Mulholland, Fernanda Duarte
Dynamical Nonequilibrium Molecular Dynamics Simulations Identify Allosteric Sites and Positions Associated with Drug Resistance in the SARS-CoV-2 Main Protease. JACS Au 3 (6) (2023)
Leonor Guerra-Guimarães, Carla Pinheiro, Ana Sofia F Oliveira, Andrea Mira-Jover, Javier Valverde, Fernanda Alves de Freitas Guedes, Herlander Azevedo, Vitor Várzea, Antonio Jesús Muñoz Pajares
The chloroplast protein HCF164 is predicted to be associated with Coffea S H 9 resistance factor against Hemileia vastatrix. Scientific reports 13 (1) (2023)
Deborah E Daniels, Ivan Ferrer-Vicens, Joseph Hawksworth, Tatyana N Andrienko, Elizabeth M Finnie, Natalie S Bretherton, Daniel C J Ferguson, Ana Sofia F Oliveira, Jenn-Yeu A Szeto, Marieangela C Wilson, John N Brewin, Jan Frayne
Human cellular model systems of β-thalassemia enable in-depth analysis of disease phenotype. Nature communications 14 (1) (2023)
Abigail Dommer, Lorenzo Casalino, Fiona Kearns, Mia A Rosenfeld, Nicholas Wauer, Surl-Hee Ahn, John D Russo, Ana Sofia F Oliveira, Clare Morris, Anthony Bogetti, Anda Trifan, Alexander Brace, Terra Sztain, Austin Clyde, Heng Ma, Chakra Chennubhotla, Hyungro Lee, Matteo Turilli, Syma Khalid, Teresa Tamayo-Mendoza, Matthew Welborn, Anders Christensen, Daniel Ga Smith, Zhuoran Qiao, Sai K Sirumalla, Michael O'Connor, Frederick Manby, Anima Anandkumar, David Hardy, James C Phillips, Abraham Stern, Josh Romero, David Clark, Mitchell Dorrell, Tom Maiden, Lei Huang, John McCalpin, Christopher Woods, Alan Gray, Matt Williams, Bryan Barker, Harinda Rajapaksha, Richard Pitts, Tom Gibbs, John Stone, Daniel M Zuckerman, Adrian J Mulholland, Thomas Miller, Shantenu Jha, Arvind Ramanathan, Lillian T Chong, Rommie Elizabeth Amaro
#COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol. The international journal of high performance computing applications 37 (1) (2022)
Abigail Dommer, Lorenzo Casalino, Fiona Kearns, Mia A Rosenfeld, Nicholas Wauer, Surl-Hee Ahn, John D Russo, Ana Sofia F Oliveira, Clare Morris, Anthony Bogetti, Anda Trifan, Alexander Brace, Terra Sztain, Austin Clyde, Heng Ma, Chakra Chennubhotla, Hyungro Lee, Matteo Turilli, Syma Khalid, Teresa Tamayo-Mendoza, Matthew Welborn, Anders Christensen, Daniel Ga Smith, Zhuoran Qiao, Sai K Sirumalla, Michael O'Connor, Frederick Manby, Anima Anandkumar, David Hardy, James C Phillips, Abraham Stern, Josh Romero, David Clark, Mitchell Dorrell, Tom Maiden, Lei Huang, John McCalpin, Christopher Woods, Alan Gray, Matt Williams, Bryan Barker, Harinda Rajapaksha, Richard Pitts, Tom Gibbs, John Stone, Daniel M Zuckerman, Adrian J Mulholland, Thomas Miller, Shantenu Jha, Arvind Ramanathan, Lillian T Chong, Rommie Elizabeth Amaro
#COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol. The international journal of high performance computing applications 37 (1) (2022)
William John Allen, Robin Adam Corey, Daniel W Watkins, Ana Sofia F Oliveira, Kiel Hards, Gregory M Cook, Ian Collinson
Rate-limiting transport of positively charged arginine residues through the Sec-machinery is integral to the mechanism of protein secretion. eLife 11 (2022)
Abigail Dommer, Lorenzo Casalino, Fiona Kearns, Mia A Rosenfeld, Nicholas Wauer, Surl-Hee Ahn, John D Russo, Ana Sofia F Oliveira, Clare Morris, Anthony Bogetti, Anda Trifan, Alexander Brace, Terra Sztain, Austin Clyde, Heng Ma, Chakra Chennubhotla, Hyungro Lee, Matteo Turilli, Syma Khalid, Teresa Tamayo-Mendoza, Matthew Welborn, Anders Christensen, Daniel Ga Smith, Zhuoran Qiao, Sai K Sirumalla, Michael O'Connor, Frederick Manby, Anima Anandkumar, David Hardy, James C Phillips, Abraham Stern, Josh Romero, David Clark, Mitchell Dorrell, Tom Maiden, Lei Huang, John McCalpin, Christopher Woods, Alan Gray, Matt Williams, Bryan Barker, Harinda Rajapaksha, Richard Pitts, Tom Gibbs, John Stone, Daniel M Zuckerman, Adrian J Mulholland, Thomas Miller, Shantenu Jha, Arvind Ramanathan, Lillian T Chong, Rommie Elizabeth Amaro
#COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol. The international journal of high performance computing applications 37 (1) (2022)
Juan Facundo Chrestia, Ana Sofia F Oliveira, Adrian J Mulholland, Timothy Gallagher, Isabel Bermudez, Cecilia Bouzat
A Functional Interaction Between Y674-R685 Region of the SARS-CoV-2 Spike Protein and the Human α7 Nicotinic Receptor. Molecular neurobiology 59 (10) (2022)
Abigail Dommer, Lorenzo Casalino, Fiona Kearns, Mia A Rosenfeld, Nicholas Wauer, Surl-Hee Ahn, John D Russo, Ana Sofia F Oliveira, Clare Morris, Anthony Bogetti, Anda Trifan, Alexander Brace, Terra Sztain, Austin Clyde, Heng Ma, Chakra Chennubhotla, Hyungro Lee, Matteo Turilli, Syma Khalid, Teresa Tamayo-Mendoza, Matthew Welborn, Anders Christensen, Daniel Ga Smith, Zhuoran Qiao, Sai K Sirumalla, Michael O'Connor, Frederick Manby, Anima Anandkumar, David Hardy, James C Phillips, Abraham Stern, Josh Romero, David Clark, Mitchell Dorrell, Tom Maiden, Lei Huang, John McCalpin, Christopher Woods, Alan Gray, Matt Williams, Bryan Barker, Harinda Rajapaksha, Richard Pitts, Tom Gibbs, John Stone, Daniel M Zuckerman, Adrian J Mulholland, Thomas Miller, Shantenu Jha, Arvind Ramanathan, Lillian T Chong, Rommie Elizabeth Amaro
#COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol. The international journal of high performance computing applications 37 (1) (2022)
Samia A Elseginy, Ana Sofia F Oliveira, Deborah K Shoemark, Richard B Sessions
Identification and validation of novel microtubule suppressors with an imidazopyridine scaffold through structure-based virtual screening and docking. RSC medicinal chemistry 13 (8) (2022)
Kapil Gupta, Christine Toelzer, Maia Kavanagh Williamson, Deborah K Shoemark, Ana Sofia F Oliveira, David A Matthews, Abdulaziz Almuqrin, Oskar Staufer, Sathish K N Yadav, Ufuk Borucu, Frederic Garzoni, Daniel Fitzgerald, Joachim Pius Spatz, Adrian J Mulholland, Andrew D Davidson, Christiane Schaffitzel, Imre Berger
Structural insights in cell-type specific evolution of intra-host diversity by SARS-CoV-2. Nature communications 13 (1) (2022)
Ana Sofia F Oliveira, Giovanni Ciccotti, Shozeb Haider, Adrian J Mulholland
Dynamical nonequilibrium molecular dynamics reveals the structural basis for allostery and signal propagation in biomolecular systems. The European physical journal. B 94 (7) (2021)
Teresa Minguez-Viñas, Beatriz Elizabeth Nielsen, Deborah K Shoemark, Cecilia Gotti, Richard B Sessions, Adrian J Mulholland, Cecilia Bouzat, Susan Wonnacott, Timothy Gallagher, Isabel Bermudez, Ana Sofia F Oliveira
A conserved arginine with non-conserved function is a key determinant of agonist selectivity in α7 nicotinic ACh receptors. British journal of pharmacology 178 (7) (2021)

Ana Sofia F Oliveira.css-eqlu8i{font-size:small;padding-left:4px;} (Sofia Oliveira, Ana Sofia Oliveira, A Sofia F Oliveira)

Publication Activity (10 Years)

Top Topics

Top Venues

Ana Sofia F Oliveira (Sofia Oliveira, Ana Sofia Oliveira, A Sofia F Oliveira)