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Alexandre P Marand

ORCID

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 13

Top Venues

bioRxiv : the preprint server for biology

Nature plants

Proceedings of the National Academy of Sciences of the United States of America

The plant genome

University of Georgia

University of Wisconsin Madison (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Georgia Jul 1o 2018

United States

Postdoctoral Scholar :: Genetics

Education History

University of Wisconsin Madison Sep 1o 2013 - Jun 30o 2018

United States

PHD :: Horticulture

Publications

Alexandre P Marand
Computational Analysis of Maize Enhancer Regulatory Elements Using ATAC-STARR-seq. bioRxiv : the preprint server for biology (2023)
Alexandre P Marand
Computational Analysis of Maize Enhancer Regulatory Elements Using ATAC-STARR-seq. bioRxiv : the preprint server for biology (2023)
Alexandre P Marand
Computational Analysis of Maize Enhancer Regulatory Elements Using ATAC-STARR-seq. bioRxiv : the preprint server for biology (2023)
Travis Wrightsman, Alexandre P Marand, Peter A Crisp, Springer M Nathan, Edward S Buckler
Modeling chromatin state from sequence across angiosperms using recurrent convolutional neural networks. The plant genome 15 (3) (2022)
John Pablo Mendieta, Alexandre P Marand, William A Ricci, Xuan Zhang, Robert J Schmitz
Leveraging histone modifications to improve genome annotations. G3 (Bethesda, Md.) 11 (10) (2021)
Matthew B Hufford, Arun S Seetharam, Margaret R Woodhouse, Kapeel M Chougule, Shujun Ou, Jianing Liu, William A Ricci, Tingting Guo, Andrew Olson, Yinjie Qiu, Rafael Della Coletta, Silas B Tittes, Asher I Hudson, Alexandre P Marand, Sharon Wei, Zhenyuan Lu, Bo Wang, Marcela Karey Tello-Ruiz, Rebecca D Piri, Na Wang, Dong Won Kim, Yibing Zeng, Christine H O'Connor, Xianran Li, Amanda M Gilbert, Erin L Baggs, Ksenia V Krasileva, John L Portwood, Ethalinda K S Cannon, Carson M Andorf, Nancy Manchanda, Samantha J Snodgrass, David E Hufnagel, Qiuhan Jiang, Sarah Pedersen, Michael L Syring, David A Kudrna, Victor Llaca, Kevin Fengler, Robert J Schmitz, Jeffrey Ross-Ibarra, Jianming Yu, Jonathan I Gent, Candice N Hirsch, Doreen H Ware, R Kelly Dawe
De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes. Science (New York, N.Y.) 373 (6555) (2021)
Peter A Crisp, Alexandre P Marand, Jaclyn M Noshay, Peng Zhou, Zefu Lu, Robert J Schmitz, Springer M Nathan
Stable unmethylated DNA demarcates expressed genes and their cis-regulatory space in plant genomes. Proceedings of the National Academy of Sciences of the United States of America 117 (38) (2020)
Rudo Kieft, Yang Zhang, Alexandre P Marand, Jose Dagoberto Moran, Robert Bridger, Lance Wells, Robert J Schmitz, Robert Sabatini
Identification of a novel base J binding protein complex involved in RNA polymerase II transcription termination in trypanosomes. PLoS genetics 16 (2) (2020)
Alexandre P Marand, Shelley H Jansky, Joseph L Gage, Andy J Hamernik, Natalia de Leon, Jiming Jiang
Residual Heterozygosity and Epistatic Interactions Underlie the Complex Genetic Architecture of Yield in Diploid Potato. Genetics 212 (1) (2019)
William A Ricci, Zefu Lu, Lexiang Ji, Alexandre P Marand, Christina L Ethridge, Nathalie G Murphy, Jaclyn M Noshay, Mary Galli, María Katherine Mejía-Guerra, Maria Colomé-Tatché, Frank Johannes, M Jordan Rowley, Victor G Corces, Jixian Zhai, Michael J Scanlon, Edward S Buckler, Andrea Gallavotti, Nathan M Springer, Robert J Schmitz, Xiaoyu Zhang
Widespread long-range cis-regulatory elements in the maize genome. Nature plants 5 (12) (2019)
Zefu Lu, Alexandre P Marand, William A Ricci, Christina L Ethridge, Xiaoyu Zhang, Robert J Schmitz
The prevalence, evolution and chromatin signatures of plant regulatory elements. Nature plants 5 (12) (2019)
Alexandre P Marand, Hainan Zhao, Wenli Zhang, Zixian Zeng, Chao Fang, Jiming Jiang
Historical Meiotic Crossover Hotspots Fueled Patterns of Evolutionary Divergence in Rice. The Plant cell 31 (3) (2019)
Hainan Zhao, Wenli Zhang, Lifen Chen, Lei Wang, Alexandre P Marand, Yufeng Wu, Jiming Jiang
Proliferation of Regulatory DNA Elements Derived from Transposable Elements in the Maize Genome. Plant physiology 176 (4) (2018)

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Publication Activity (10 Years)

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Alexandre P Marand