Buyong Ma

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 33

Top Topics

Monoclonal Antibody

Positive Breast Cancer

Molecular Dynamics Simulations

Amyotrophic Lateral Sclerosis

Top Venues

International journal of molecular sciences

Nature communications

ACS chemical neuroscience

Antibodies (Basel, Switzerland)

This page only lists publications with an associated author ORCID identifier.

Publications

Jingyi Bai, Xi Li, Jun Zhao, Huifang Zong, Yuan Yuan, Lei Wang, Xiaoshuai Zhang, Yong Ke, Lei Han, Jianrong Xu, Buyong Ma, Baohong Zhang, Jianwei Zhu
Re-Engineering Therapeutic Anti-Aβ Monoclonal Antibody to Target Amyloid Light Chain. International journal of molecular sciences 25 (3) (2024)
Jingyi Bai, Xi Li, Jun Zhao, Huifang Zong, Yuan Yuan, Lei Wang, Xiaoshuai Zhang, Yong Ke, Lei Han, Jianrong Xu, Buyong Ma, Baohong Zhang, Jianwei Zhu
Re-Engineering Therapeutic Anti-Aβ Monoclonal Antibody to Target Amyloid Light Chain. International journal of molecular sciences 25 (3) (2024)
Jingyi Bai, Xi Li, Jun Zhao, Huifang Zong, Yuan Yuan, Lei Wang, Xiaoshuai Zhang, Yong Ke, Lei Han, Jianrong Xu, Buyong Ma, Baohong Zhang, Jianwei Zhu
Re-Engineering Therapeutic Anti-Aβ Monoclonal Antibody to Target Amyloid Light Chain. International journal of molecular sciences 25 (3) (2024)
Jingyi Bai, Xi Li, Jun Zhao, Huifang Zong, Yuan Yuan, Lei Wang, Xiaoshuai Zhang, Yong Ke, Lei Han, Jianrong Xu, Buyong Ma, Baohong Zhang, Jianwei Zhu
Re-Engineering Therapeutic Anti-Aβ Monoclonal Antibody to Target Amyloid Light Chain. International journal of molecular sciences 25 (3) (2024)
Jingyi Bai, Xi Li, Jun Zhao, Huifang Zong, Yuan Yuan, Lei Wang, Xiaoshuai Zhang, Yong Ke, Lei Han, Jianrong Xu, Buyong Ma, Baohong Zhang, Jianwei Zhu
Re-Engineering Therapeutic Anti-Aβ Monoclonal Antibody to Target Amyloid Light Chain. International journal of molecular sciences 25 (3) (2024)
Jingyi Bai, Xi Li, Jun Zhao, Huifang Zong, Yuan Yuan, Lei Wang, Xiaoshuai Zhang, Yong Ke, Lei Han, Jianrong Xu, Buyong Ma, Baohong Zhang, Jianwei Zhu
Re-Engineering Therapeutic Anti-Aβ Monoclonal Antibody to Target Amyloid Light Chain. International journal of molecular sciences 25 (3) (2024)
Rongmei Lin, Guoning Tang, Zhonggui Gao, Jiangtao Lei, Buyong Ma, Yuxiang Mo
Molecular Insights into the Self-Assembly of a Full-Length hIAPP Trimer: β-Protofibril Formed by β-Hairpin Lateral or Longitudinal Association. The journal of physical chemistry. B (2023)
Xincheng Zeng, Tianqun Wang, Yue Kang, Ganggang Bai, Buyong Ma
Evaluation of Molecular Simulations and Deep Learning Prediction of Antibodies' Recognition of TRBC1 and TRBC2. Antibodies (Basel, Switzerland) 12 (3) (2023)
Jienyu Ding, Yun-Tzai Lee, Yuba Bhandari, Charles D Schwieters, Lixin Fan, Ping Yu, Sergey G Tarosov, Jason R Stagno, Buyong Ma, Ruth Nussinov, Alan Rein, Jinwei Zhang, Yun-Xing Wang
Visualizing RNA conformational and architectural heterogeneity in solution. Nature communications 14 (1) (2023)
Jienyu Ding, Yun-Tzai Lee, Yuba Bhandari, Charles D Schwieters, Lixin Fan, Ping Yu, Sergey G Tarosov, Jason R Stagno, Buyong Ma, Ruth Nussinov, Alan Rein, Jinwei Zhang, Yun-Xing Wang
Visualizing RNA conformational and architectural heterogeneity in solution. Nature communications 14 (1) (2023)
Jong Il Ahn, Liang Zhang, Harsha Ravishankar, Lixin Fan, Klara Kirsch, Yan Zeng, Lingjun Meng, Jung-Eun Park, Hye-Yeoung Yun, Rodolfo Ghirlando, Buyong Ma, David Ball, Bonsu Ku, Ruth Nussinov, Jeremy D Schmit, William F Heinz, Seung Jun Kim, Tatiana S Karpova, Yun-Xing Wang, Kyung S Lee
Author Correction: Architectural basis for cylindrical self-assembly governing Plk4-mediated centriole duplication in human cells. Communications biology 6 (1) (2023)
Xincheng Zeng, Ganggang Bai, Chuance Sun, Buyong Ma
Recent Progress in Antibody Epitope Prediction. Antibodies (Basel, Switzerland) 12 (3) (2023)
Jienyu Ding, Yun-Tzai Lee, Yuba Bhandari, Charles D Schwieters, Lixin Fan, Ping Yu, Sergey G Tarosov, Jason R Stagno, Buyong Ma, Ruth Nussinov, Alan Rein, Jinwei Zhang, Yun-Xing Wang
Visualizing RNA conformational and architectural heterogeneity in solution. Nature communications 14 (1) (2023)
Yanjing Wang, Siyi Wang, Yuchen Niu, Buyong Ma, Jingjing Li
Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation. International journal of molecular sciences 24 (22) (2023)
Jong Il Ahn, Liang Zhang, Harsha Ravishankar, Lixin Fan, Klara Kirsch, Yan Zeng, Lingjun Meng, Jung-Eun Park, Hye-Yeoung Yun, Rodolfo Ghirlando, Buyong Ma, David Ball, Bonsu Ku, Ruth Nussinov, Jeremy D Schmit, William F Heinz, Seung Jun Kim, Tatiana S Karpova, Yun-Xing Wang, Kyung S Lee
Architectural basis for cylindrical self-assembly governing Plk4-mediated centriole duplication in human cells. Communications biology 6 (1) (2023)
Jienyu Ding, Yun-Tzai Lee, Yuba Bhandari, Charles D Schwieters, Lixin Fan, Ping Yu, Sergey G Tarosov, Jason R Stagno, Buyong Ma, Ruth Nussinov, Alan Rein, Jinwei Zhang, Yun-Xing Wang
Visualizing RNA conformational and architectural heterogeneity in solution. Nature communications 14 (1) (2023)
Jienyu Ding, Yun-Tzai Lee, Yuba Bhandari, Charles D Schwieters, Lixin Fan, Ping Yu, Sergey G Tarosov, Jason R Stagno, Buyong Ma, Ruth Nussinov, Alan Rein, Jinwei Zhang, Yun-Xing Wang
Visualizing RNA conformational and architectural heterogeneity in solution. Nature communications 14 (1) (2023)
Jienyu Ding, Yun-Tzai Lee, Yuba Bhandari, Charles D Schwieters, Lixin Fan, Ping Yu, Sergey G Tarosov, Jason R Stagno, Buyong Ma, Ruth Nussinov, Alan Rein, Jinwei Zhang, Yun-Xing Wang
Visualizing RNA conformational and architectural heterogeneity in solution. Nature communications 14 (1) (2023)
Na-Young Song, Xin Li, Buyong Ma, Jami Willette-Brown, Feng Zhu, Chengfei Jiang, Ling Su, Jyoti Shetty, Yongmei Zhao, Gongping Shi, Sayantan Banerjee, Xiaolin Wu, Bao Tran, Ruth Nussinov, Michael Karin, Yinling Hu
IKKα-deficient lung adenocarcinomas generate an immunosuppressive microenvironment by overproducing Treg-inducing cytokines. Proceedings of the National Academy of Sciences of the United States of America 119 (6) (2022)
Kazi Lutful Kabir, Buyong Ma, Ruth Nussinov, Amarda Shehu
Fewer Dimensions, More Structures for Improved Discrete Models of Dynamics of Free versus Antigen-Bound Antibody. Biomolecules 12 (7) (2022)
Kohei Tsuji, David Hymel, Buyong Ma, Hirokazu Tamamura, Ruth Nussinov, Terrence R Burke
Development of ultra-high affinity bivalent ligands targeting the polo-like kinase 1. RSC chemical biology 3 (9) (2022)
Buyong Ma, Ganggang Bai, Ruth Nussinov, Jienyu Ding, Yun-Xing Wang
Conformational Ensemble of TteAdoCbl Riboswitch Provides Stable Structural Elements for Conformation Selection and Population Shift in Cobalamin Recognition. The journal of physical chemistry. B 125 (10) (2021)
Phuong Hoang Nguyen, Ayyalusamy Ramamoorthy, Bikash R Sahoo, Jie Zheng, Peter Faller, John E Straub, Laura Domínguez, Joan-Emma Shea, Nikolay V Dokholyan, Alfonso De Simone, Buyong Ma, Ruth Nussinov, Saeed Najafi, Son Tung Ngo, Antoine Loquet, Mara Chiricotto, Pritam Ganguly, James J McCarty, Mai Suan Li, Carol K Hall, Yiming Wang, Yifat Miller, Simone Melchionna, Birgit Habenstein, Stepan Timr, Jiaxing Chen, Brianna Hnath, Birgit Strodel, Rakez Kayed, Sylvain Lesné, Guanghong Wei, Fabio Sterpone, Andrew J Doig, Philippe Derreumaux
Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis. Chemical reviews 121 (4) (2021)
Jun Zhao, Nishant Mohan, Ruth Nussinov, Buyong Ma, Wen Jin Wu
Trastuzumab Blocks the Receiver Function of HER2 Leading to the Population Shifts of HER2-Containing Homodimers and Heterodimers. Antibodies (Basel, Switzerland) 10 (1) (2021)
Yujie Chen, Guanghong Wei, Jun Zhao, Ruth Nussinov, Buyong Ma
Computational Investigation of Gantenerumab and Crenezumab Recognition of Aβ Fibrils in Alzheimer's Disease Brain Tissue. ACS chemical neuroscience 11 (20) (2020)
Buyong Ma, Ruth Nussinov
Protein dynamics: Conformational footprints. Nature chemical biology 12 (11) (2019)
Liang Xu, Buyong Ma, Ruth Nussinov, Damien Thompson
Correction to Familial Mutations May Switch Conformational Preferences in α-Synuclein Fibrils. ACS chemical neuroscience 9 (7) (2018)
Christopher A Lucchesi, Jin Zhang, Buyong Ma, Mingyi Chen, Xinbin Chen
Disruption of the Rbm38-eIF4E Complex with a Synthetic Peptide Pep8 Increases p53 Expression. Cancer research 79 (4) (2018)
Liang Xu, Buyong Ma, Ruth Nussinov, Damien Thompson
Familial Mutations May Switch Conformational Preferences in α-Synuclein Fibrils. ACS chemical neuroscience 8 (4) (2017)
Yehong Gong, Yuzhen Zhu, Yu Zou, Buyong Ma, Ruth Nussinov, Qingwen Zhang
Human Neuronal Calcium Sensor-1 Protein Avoids Histidine Residues To Decrease pH Sensitivity. The journal of physical chemistry. B 121 (3) (2017)
Mingzhen Zhang, Jie Zheng, Ruth Nussinov, Buyong Ma
Release of Cytochrome C from Bax Pores at the Mitochondrial Membrane. Scientific reports 7 (1) (2017)
Meryl Wang, David Zhu, Jianwei Zhu, Ruth Nussinov, Buyong Ma
Local and global anatomy of antibody-protein antigen recognition. Journal of molecular recognition : JMR 31 (5) (2017)
William M Hewitt, George T Lountos, Katherine Zlotkowski, Samuel D Dahlhauser, Lindsey B Saunders, Danielle Needle, Joseph E Tropea, Chendi Zhan, Guanghong Wei, Buyong Ma, Ruth Nussinov, David S Waugh, John S Schneekloth
Insights Into the Allosteric Inhibition of the SUMO E2 Enzyme Ubc9. Angewandte Chemie (International ed. in English) 55 (19) (2016)
Yiling Xiao, Buyong Ma, Dan McElheny, Sudhakar Parthasarathy, Fei Long, Minako Hoshi, Ruth Nussinov, Yoshitaka Ishii
Aβ(1-42) fibril structure illuminates self-recognition and replication of amyloid in Alzheimer's disease. Nature structural & molecular biology 22 (6) (2015)