Judd F Hultquist (Judd Hultquist)

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 72

Top Topics

Respiratory Syndrome Coronavirus

Respiratory Tract

Top Venues

bioRxiv : the preprint server for biology

Research square

This page only lists publications with an associated author ORCID identifier.

Publications

William J Cisneros, Miriam Walter, Shimaa H A Soliman, Lacy M Simons, Daphne Cornish, Ariel W Halle, Eun-Young Kim, Steven M Wolinsky, Ali Shilatifard, Judd F Hultquist
Release of P-TEFb from the Super Elongation Complex promotes HIV-1 latency reversal. bioRxiv : the preprint server for biology (2024)
Calvin Law, Vanessa Sue Wacleche, Ye Cao, Arundhati Pillai, John Sowerby, Brandon Hancock, Alice Horisberger, Sabrina Bracero, Viktoriya Skidanova, Zhihan Li, Ifeoluwakiisi Adejoorin, Eilish Dillon, Isaac J Benque, Diana Pena Nunez, Daimon P Simmons, Joshua Keegan, Lin Chen, Tina Baker, Phillip Z Brohawn, Hussein Al-Mossawi, Ling-Yang Hao, Brian Jones, Navin Rao, Yujie Qu, Stephen E Alves, null null, Anna Helena Jonsson, Katharina S Shaw, Ruth Ann Vleugels, Elena Massarotti, Karen H Costenbader, Michael B Brenner, James Arthur Lederer, Judd F Hultquist, Jaehyuk Choi, Deepak A Rao
Interferon subverts an AHR-JUN axis to promote CXCL13 + T cells in lupus. Nature 631 (8022) (2024)
Jacob Class, Lacy M Simons, Ramon Lorenzo-Redondo, Jazmin Galván Achi, Laura Cooper, Tanushree Dangi, Pablo Penaloza-MacMaster, Egon Anderson Ozer, Sarah E Lutz, Lijun Rong, Judd F Hultquist, Michelle Richner
Evolution of SARS-CoV-2 in the murine central nervous system drives viral diversification. Nature microbiology (2024)
Calvin Law, Vanessa Sue Wacleche, Ye Cao, Arundhati Pillai, John Sowerby, Brandon Hancock, Alice Horisberger, Sabrina Bracero, Viktoriya Skidanova, Zhihan Li, Ifeoluwakiisi Adejoorin, Eilish Dillon, Isaac J Benque, Diana Pena Nunez, Daimon P Simmons, Joshua Keegan, Lin Chen, Tina Baker, Phillip Z Brohawn, Hussein Al-Mossawi, Ling-Yang Hao, Brian Jones, Navin Rao, Yujie Qu, Stephen E Alves, null null, Anna Helena Jonsson, Katharina S Shaw, Ruth Ann Vleugels, Elena Massarotti, Karen H Costenbader, Michael B Brenner, James Arthur Lederer, Judd F Hultquist, Jaehyuk Choi, Deepak A Rao
Interferon subverts an AHR-JUN axis to promote CXCL13 + T cells in lupus. Nature (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology 25 (9) (2024)
Ujjwal Rathore, Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M Haas, Mehdi Bouhaddou, Danielle L Swaney, Erica Stevenson, Lorena Zuliani-Alvarez, Michael J McGregor, Autumn Turner-Groth, Charles Ochieng' Olwal, Yaw Bediako, Hannes Braberg, Margaret Soucheray, Melanie M Ott, Manon Eckhardt, Judd F Hultquist, Alexander Marson, Robyn M Kaake, Nevan J Krogan
CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells. mBio 15 (4) (2024)
Jacob Class, Lacy M Simons, Ramon Lorenzo-Redondo, Jazmin Galván Achi, Laura Cooper, Tanushree Dangi, Pablo Penaloza-MacMaster, Egon Anderson Ozer, Sarah E Lutz, Lijun Rong, Judd F Hultquist, Michelle Richner
Evolution of SARS-CoV-2 in the murine central nervous system drives viral diversification. Nature microbiology (2024)
Ujjwal Rathore, Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M Haas, Mehdi Bouhaddou, Danielle L Swaney, Erica Stevenson, Lorena Zuliani-Alvarez, Michael J McGregor, Autumn Turner-Groth, Charles Ochieng' Olwal, Yaw Bediako, Hannes Braberg, Margaret Soucheray, Melanie M Ott, Manon Eckhardt, Judd F Hultquist, Alexander Marson, Robyn M Kaake, Nevan J Krogan
CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells. mBio (2024)
William J Cisneros, Shimaa H A Soliman, Miriam Walter, Lacy M Simons, Daphne Cornish, Simone De Fabritiis, Ariel W Halle, Eun-Young Kim, Steven M Wolinsky, Ramon Lorenzo-Redondo, Ali Shilatifard, Judd F Hultquist
Release of P-TEFb from the Super Elongation Complex promotes HIV-1 latency reversal. PLoS pathogens 20 (9) (2024)
Calvin Law, Vanessa Sue Wacleche, Ye Cao, Arundhati Pillai, John Sowerby, Brandon Hancock, Alice Horisberger, Sabrina Bracero, Viktoriya Skidanova, Zhihan Li, Ifeoluwakiisi Adejoorin, Eilish Dillon, Isaac J Benque, Diana Pena Nunez, Daimon P Simmons, Joshua Keegan, Lin Chen, Tina Baker, Phillip Z Brohawn, Hussein Al-Mossawi, Ling-Yang Hao, Brian Jones, Navin Rao, Yujie Qu, Stephen E Alves, null null, Anna Helena Jonsson, Katharina S Shaw, Ruth Ann Vleugels, Elena Massarotti, Karen H Costenbader, Michael B Brenner, James Arthur Lederer, Judd F Hultquist, Jaehyuk Choi, Deepak A Rao
Interferon subverts an AHR-JUN axis to promote CXCL13 + T cells in lupus. Nature 631 (8022) (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology (2024)
Estefany R Guzman, Lacy M Simons, Taylor J Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah H Nam, Michael G Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist
Deviations in RSV epidemiological patterns and population structures in the United States following the COVID-19 pandemic. Nature communications 15 (1) (2024)
Ujjwal Rathore, Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M Haas, Mehdi Bouhaddou, Danielle L Swaney, Erica Stevenson, Lorena Zuliani-Alvarez, Michael J McGregor, Autumn Turner-Groth, Charles Ochieng' Olwal, Yaw Bediako, Hannes Braberg, Margaret Soucheray, Melanie M Ott, Manon Eckhardt, Judd F Hultquist, Alexander Marson, Robyn M Kaake, Nevan J Krogan
CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells. mBio 15 (4) (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology (2024)
Calvin Law, Vanessa Sue Wacleche, Ye Cao, Arundhati Pillai, John Sowerby, Brandon Hancock, Alice Horisberger, Sabrina Bracero, Viktoriya Skidanova, Zhihan Li, Ifeoluwakiisi Adejoorin, Eilish Dillon, Isaac J Benque, Diana Pena Nunez, Daimon P Simmons, Joshua Keegan, Lin Chen, Tina Baker, Phillip Z Brohawn, Hussein Al-Mossawi, Ling-Yang Hao, Brian Jones, Navin Rao, Yujie Qu, Stephen E Alves, null null, Anna Helena Jonsson, Katharina S Shaw, Ruth Ann Vleugels, Elena Massarotti, Karen H Costenbader, Michael B Brenner, James Arthur Lederer, Judd F Hultquist, Jaehyuk Choi, Deepak A Rao
Interferon subverts an AHR-JUN axis to promote CXCL13 + T cells in lupus. Nature (2024)
Estefany R Guzman, Lacy M Simons, Taylor J Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah H Nam, Michael G Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist
Deviations in RSV epidemiological patterns and population structures in the United States following the COVID-19 pandemic. Nature communications 15 (1) (2024)
Calvin Law, Vanessa Sue Wacleche, Ye Cao, Arundhati Pillai, John Sowerby, Brandon Hancock, Alice Horisberger, Sabrina Bracero, Viktoriya Skidanova, Zhihan Li, Ifeoluwakiisi Adejoorin, Eilish Dillon, Isaac J Benque, Diana Pena Nunez, Daimon P Simmons, Joshua Keegan, Lin Chen, Tina Baker, Phillip Z Brohawn, Hussein Al-Mossawi, Ling-Yang Hao, Brian Jones, Navin Rao, Yujie Qu, Stephen E Alves, null null, Anna Helena Jonsson, Katharina S Shaw, Ruth Ann Vleugels, Elena Massarotti, Karen H Costenbader, Michael B Brenner, James Arthur Lederer, Judd F Hultquist, Jaehyuk Choi, Deepak A Rao
Interferon subverts an AHR-JUN axis to promote CXCL13 + T cells in lupus. Nature (2024)
Calvin Law, Vanessa Sue Wacleche, Ye Cao, Arundhati Pillai, John Sowerby, Brandon Hancock, Alice Horisberger, Sabrina Bracero, Viktoriya Skidanova, Zhihan Li, Ifeoluwakiisi Adejoorin, Eilish Dillon, Isaac J Benque, Diana Pena Nunez, Daimon P Simmons, Joshua Keegan, Lin Chen, Tina Baker, Phillip Z Brohawn, Hussein Al-Mossawi, Ling-Yang Hao, Brian Jones, Navin Rao, Yujie Qu, Stephen E Alves, null null, Anna Helena Jonsson, Katharina S Shaw, Ruth Ann Vleugels, Elena Massarotti, Karen H Costenbader, Michael B Brenner, James Arthur Lederer, Judd F Hultquist, Jaehyuk Choi, Deepak A Rao
Interferon subverts an AHR-JUN axis to promote CXCL13 + T cells in lupus. Nature 631 (8022) (2024)
Ujjwal Rathore, Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M Haas, Mehdi Bouhaddou, Danielle L Swaney, Erica Stevenson, Lorena Zuliani-Alvarez, Michael J McGregor, Autumn Turner-Groth, Charles Ochieng' Olwal, Yaw Bediako, Hannes Braberg, Margaret Soucheray, Melanie M Ott, Manon Eckhardt, Judd F Hultquist, Alexander Marson, Robyn M Kaake, Nevan J Krogan
CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells. mBio 15 (4) (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology (2024)
Calvin Law, Vanessa Sue Wacleche, Ye Cao, Arundhati Pillai, John Sowerby, Brandon Hancock, Alice Horisberger, Sabrina Bracero, Viktoriya Skidanova, Zhihan Li, Ifeoluwakiisi Adejoorin, Eilish Dillon, Isaac J Benque, Diana Pena Nunez, Daimon P Simmons, Joshua Keegan, Lin Chen, Tina Baker, Phillip Z Brohawn, Hussein Al-Mossawi, Ling-Yang Hao, Brian Jones, Navin Rao, Yujie Qu, Stephen E Alves, null null, Anna Helena Jonsson, Katharina S Shaw, Ruth Ann Vleugels, Elena Massarotti, Karen H Costenbader, Michael B Brenner, James Arthur Lederer, Judd F Hultquist, Jaehyuk Choi, Deepak A Rao
Interferon subverts an AHR-JUN axis to promote CXCL13 + T cells in lupus. Nature 631 (8022) (2024)
Ujjwal Rathore, Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M Haas, Mehdi Bouhaddou, Danielle L Swaney, Erica Stevenson, Lorena Zuliani-Alvarez, Michael J McGregor, Autumn Turner-Groth, Charles Ochieng' Olwal, Yaw Bediako, Hannes Braberg, Margaret Soucheray, Melanie M Ott, Manon Eckhardt, Judd F Hultquist, Alexander Marson, Robyn M Kaake, Nevan J Krogan
CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells. mBio 15 (4) (2024)
Ujjwal Rathore, Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M Haas, Mehdi Bouhaddou, Danielle L Swaney, Erica Stevenson, Lorena Zuliani-Alvarez, Michael J McGregor, Autumn Turner-Groth, Charles Ochieng' Olwal, Yaw Bediako, Hannes Braberg, Margaret Soucheray, Melanie M Ott, Manon Eckhardt, Judd F Hultquist, Alexander Marson, Robyn M Kaake, Nevan J Krogan
CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells. mBio 15 (4) (2024)
Ujjwal Rathore, Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M Haas, Mehdi Bouhaddou, Danielle L Swaney, Erica Stevenson, Lorena Zuliani-Alvarez, Michael J McGregor, Autumn Turner-Groth, Charles Ochieng' Olwal, Yaw Bediako, Hannes Braberg, Margaret Soucheray, Melanie M Ott, Manon Eckhardt, Judd F Hultquist, Alexander Marson, Robyn M Kaake, Nevan J Krogan
CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells. mBio 15 (4) (2024)
Ujjwal Rathore, Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M Haas, Mehdi Bouhaddou, Danielle L Swaney, Erica Stevenson, Lorena Zuliani-Alvarez, Michael J McGregor, Autumn Turner-Groth, Charles Ochieng' Olwal, Yaw Bediako, Hannes Braberg, Margaret Soucheray, Melanie M Ott, Manon Eckhardt, Judd F Hultquist, Alexander Marson, Robyn M Kaake, Nevan J Krogan
CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells. mBio 15 (4) (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology (2024)
William J Cisneros, Miriam Walter, Shimaa H A Soliman, Lacy M Simons, Daphne Cornish, Ariel W Halle, Eun-Young Kim, Steven M Wolinsky, Ali Shilatifard, Judd F Hultquist
Release of P-TEFb from the Super Elongation Complex promotes HIV-1 latency reversal. bioRxiv : the preprint server for biology (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology 25 (9) (2024)
Ujjwal Rathore, Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M Haas, Mehdi Bouhaddou, Danielle L Swaney, Erica Stevenson, Lorena Zuliani-Alvarez, Michael J McGregor, Autumn Turner-Groth, Charles Ochieng' Olwal, Yaw Bediako, Hannes Braberg, Margaret Soucheray, Melanie M Ott, Manon Eckhardt, Judd F Hultquist, Alexander Marson, Robyn M Kaake, Nevan J Krogan
CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells. mBio 15 (4) (2024)
Estefany R Guzman, Lacy M Simons, Taylor J Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah H Nam, Michael G Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist
Deviations in RSV epidemiological patterns and population structures in the United States following the COVID-19 pandemic. Nature communications 15 (1) (2024)
Estefany R Guzman, Lacy M Simons, Taylor J Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah H Nam, Michael G Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist
Deviations in RSV epidemiological patterns and population structures in the United States following the COVID-19 pandemic. Nature communications 15 (1) (2024)
Calvin Law, Vanessa Sue Wacleche, Ye Cao, Arundhati Pillai, John Sowerby, Brandon Hancock, Alice Horisberger, Sabrina Bracero, Viktoriya Skidanova, Zhihan Li, Ifeoluwakiisi Adejoorin, Eilish Dillon, Isaac J Benque, Diana Pena Nunez, Daimon P Simmons, Joshua Keegan, Lin Chen, Tina Baker, Phillip Z Brohawn, Hussein Al-Mossawi, Ling-Yang Hao, Brian Jones, Navin Rao, Yujie Qu, Stephen E Alves, null null, Anna Helena Jonsson, Katharina S Shaw, Ruth Ann Vleugels, Elena Massarotti, Karen H Costenbader, Michael B Brenner, James Arthur Lederer, Judd F Hultquist, Jaehyuk Choi, Deepak A Rao
Publisher Correction: Interferon subverts an AHR-JUN axis to promote CXCL13 + T cells in lupus. Nature (2024)
Estefany R Guzman, Lacy M Simons, Taylor J Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah H Nam, Michael G Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist
Deviations in RSV epidemiological patterns and population structures in the United States following the COVID-19 pandemic. Nature communications 15 (1) (2024)
Shimaa H A Soliman, William J Cisneros, Marta Iwanaszko, Yuki Aoi, Sheetal Ganesan, Miriam Walter, Jacob M Zeidner, Rama K Mishra, Eun-Young Kim, Steven M Wolinsky, Judd F Hultquist, Ali Shilatifard
Enhancing HIV-1 latency reversal through regulating the elongating RNA Pol II pause-release by a small-molecule disruptor of PAF1C. Science advances 9 (10) (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Judd F Hultquist, Estefany Rios-Guzman, Lacy M Simons, Taylor Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah Nam, Michael Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo
Altered RSV Epidemiology and Genetic Diversity Following the COVID-19 Pandemic. Research square (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Jacob P Vandervaart, Nicole L Inniss, Ted Ling-Hu, George Minasov, Grant Wiersum, Monica Rosas-Lemus, Ludmilla Shuvalova, Chad J Achenbach, Judd F Hultquist, Karla J F Satchell, Kelly E R Bachta
Serodominant SARS-CoV-2 Nucleocapsid Peptides Map to Unstructured Protein Regions. Microbiology spectrum (2023)
Michelle Richner, Jacob Class, Lacy M Simons, Ramon Lorenzo-Redondo, Laura Cooper, Tanushree Dangi, Pablo Penaloza-MacMaster, Egon Anderson Ozer, Lijun Rong, Judd F Hultquist
SARS-CoV-2 Bottlenecks and Tissue-Specific Adaptation in the Central Nervous System. Research square (2023)
Paul J McLaren, Immacolata Porreca, Gennaro Iaconis, Hoi Ping Mok, Subhankar Mukhopadhyay, Emre Karakoc, Sara Cristinelli, Cristina Pomilla, István Bartha, Christian W Thorball, Riley H Tough, Paolo Angelino, Cher S Kiar, Tommy Carstensen, Segun Fatumo, Tarryn Porter, Isobel Jarvis, William C Skarnes, Andrew R Bassett, Marianne K DeGorter, Mohana Prasad Sathya Moorthy, Jeffrey F Tuff, Eun-Young Kim, Miriam Walter, Lacy M Simons, Arman Bashirova, Susan P Buchbinder, Mary N Carrington, Andrea Cossarizza, Andrea De Luca, James J Goedert, David B Goldstein, David W Haas, Steven M Goodreau, Eric O Johnson, Pontiano Kaleebu, William Kilembe, Gregory D Kirk, Neeltje A Kootstra, Alex H Kral, Olivier Lambotte, Ma Luo, Simon Mallal, Javier Martínez Picado, Laurence Meyer, José M Miro, Pravi Moodley, Ayesha A Motala, James I Mullins, Kireem Nam, Niels Obel, Fraser Pirie, Francis A Plummer, Guido Poli, Matthew A Price, Andri Rauch, Ioannis Theodorou, Alexandra Trkola, Bruce D Walker, Cheryl A Winkler, Jean-François Zagury, Stephen B Montgomery, Angela Ciuffi, Judd F Hultquist, Steven M Wolinsky, Gordon Dougan, Andrew M L Lever, Deepti Gurdasani, Harriet C T Groom, Manjinder S Sandhu, Jacques Fellay
Author Correction: Africa-specific human genetic variation near CHD1L associates with HIV-1 load. Nature (2023)
Judd F Hultquist, Estefany Rios-Guzman, Lacy M Simons, Taylor Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah Nam, Michael Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo
Altered RSV Epidemiology and Genetic Diversity Following the COVID-19 Pandemic. Research square (2023)
Thomas Hope, Mark Becker, Laura Martin-Sancho, Lacy M Simons, Michael McRaven, Sumit K Chanda, Judd F Hultquist
Live imaging of the airway epithelium reveals that mucociliary clearance modulates SARS-CoV-2 spread. Research square (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Shimaa H A Soliman, William J Cisneros, Marta Iwanaszko, Yuki Aoi, Sheetal Ganesan, Miriam Walter, Jacob M Zeidner, Rama K Mishra, Eun-Young Kim, Steven M Wolinsky, Judd F Hultquist, Ali Shilatifard
Enhancing HIV-1 latency reversal through regulating the elongating RNA Pol II pause-release by a small-molecule disruptor of PAF1C. Science advances 9 (10) (2023)
Paul J McLaren, Immacolata Porreca, Gennaro Iaconis, Hoi Ping Mok, Subhankar Mukhopadhyay, Emre Karakoc, Sara Cristinelli, Cristina Pomilla, István Bartha, Christian W Thorball, Riley H Tough, Paolo Angelino, Cher S Kiar, Tommy Carstensen, Segun Fatumo, Tarryn Porter, Isobel Jarvis, William C Skarnes, Andrew R Bassett, Marianne K DeGorter, Mohana Prasad Sathya Moorthy, Jeffrey F Tuff, Eun-Young Kim, Miriam Walter, Lacy M Simons, Arman Bashirova, Susan P Buchbinder, Mary N Carrington, Andrea Cossarizza, Andrea De Luca, James J Goedert, David B Goldstein, David W Haas, Steven M Goodreau, Eric O Johnson, Pontiano Kaleebu, William Kilembe, Gregory D Kirk, Neeltje A Kootstra, Alex H Kral, Olivier Lambotte, Ma Luo, Simon Mallal, Javier Martínez Picado, Laurence Meyer, José M Miro, Pravi Moodley, Ayesha A Motala, James I Mullins, Kireem Nam, Niels Obel, Fraser Pirie, Francis A Plummer, Guido Poli, Matthew A Price, Andri Rauch, Ioannis Theodorou, Alexandra Trkola, Bruce D Walker, Cheryl A Winkler, Jean-François Zagury, Stephen B Montgomery, Angela Ciuffi, Judd F Hultquist, Steven M Wolinsky, Gordon Dougan, Andrew M L Lever, Deepti Gurdasani, Harriet C T Groom, Manjinder S Sandhu, Jacques Fellay
Africa-specific human genetic variation near CHD1L associates with HIV-1 load. Nature (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Judd F Hultquist, Estefany Rios-Guzman, Lacy M Simons, Taylor Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah Nam, Michael Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo
Altered RSV Epidemiology and Genetic Diversity Following the COVID-19 Pandemic. Research square (2023)
Judd F Hultquist, Estefany Rios-Guzman, Lacy M Simons, Taylor Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah Nam, Michael Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo
Altered RSV Epidemiology and Genetic Diversity Following the COVID-19 Pandemic. Research square (2023)
Judd F Hultquist, Estefany Rios-Guzman, Lacy M Simons, Taylor Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah Nam, Michael Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo
Altered RSV Epidemiology and Genetic Diversity Following the COVID-19 Pandemic. Research square (2023)
Shimaa H A Soliman, William J Cisneros, Marta Iwanaszko, Yuki Aoi, Sheetal Ganesan, Miriam Walter, Jacob M Zeidner, Rama K Mishra, Eun-Young Kim, Steven M Wolinsky, Judd F Hultquist, Ali Shilatifard
Enhancing HIV-1 latency reversal through regulating the elongating RNA Pol II pause-release by a small-molecule disruptor of PAF1C. Science advances 9 (10) (2023)
Kelsey M Haas, Michael J McGregor, Mehdi Bouhaddou, Benjamin J Polacco, Eun-Young Kim, Thong T Nguyen, Billy W Newton, Matthew Urbanowski, Heejin Kim, Michael A P Williams, Veronica V Rezelj, Alexandra Hardy, Andrea Fossati, Erica J Stevenson, Ellie Sukerman, Tiffany Kim, Sudhir Penugonda, Elena Moreno, Hannes Braberg, Yuan Zhou, Giorgi Metreveli, Bhavya Harjai, Tia A Tummino, James E Melnyk, Margaret Soucheray, Jyoti Batra, Lars Pache, Laura Martin-Sancho, Jared Carlson-Stevermer, Alexander S Jureka, Christopher F Basler, Kevan M Shokat, Brian K Shoichet, Leah P Shriver, Jeffrey R Johnson, Megan L Shaw, Sumit K Chanda, Dan M Roden, Tonia C Carter, Leah C Kottyan, Rex L Chisholm, Jennifer Allen Pacheco, Maureen E Smith, Steven J Schrodi, Randy A Albrecht, Marco Vignuzzi, Lorena Zuliani-Alvarez, Danielle L Swaney, Manon Eckhardt, Steven M Wolinsky, Kris M White, Judd F Hultquist, Robyn M Kaake, Adolfo García-Sastre, Nevan J Krogan
Proteomic and genetic analyses of influenza A viruses identify pan-viral host targets. Nature communications 14 (1) (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Judd F Hultquist, Estefany Rios-Guzman, Lacy M Simons, Taylor Dean, Francesca Agnes, Anna E Pawlowski, Arghavan Alisoltanidehkordi, Hannah Nam, Michael Ison, Egon Anderson Ozer, Ramon Lorenzo-Redondo
Altered RSV Epidemiology and Genetic Diversity Following the COVID-19 Pandemic. Research square (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Shimaa H A Soliman, William J Cisneros, Marta Iwanaszko, Yuki Aoi, Sheetal Ganesan, Miriam Walter, Jacob M Zeidner, Rama K Mishra, Eun-Young Kim, Steven M Wolinsky, Judd F Hultquist, Ali Shilatifard
Enhancing HIV-1 latency reversal through regulating the elongating RNA Pol II pause-release by a small-molecule disruptor of PAF1C. Science advances 9 (10) (2023)
Ted Ling-Hu, Estefany R Guzman, Ramon Lorenzo-Redondo, Egon A Ozer, Judd F Hultquist
Challenges and Opportunities for Global Genomic Surveillance Strategies in the COVID-19 Era. Viruses 14 (11) (2022)
Joseph Hiatt, Judd F Hultquist, Michael J McGregor, Mehdi Bouhaddou, Ryan T Leenay, Lacy M Simons, Janet M Young, Paige Haas, Theodore L Roth, Victoria R Tobin, Jason A Wojcechowskyj, Jonathan M Woo, Ujjwal Rathore, Devin A Cavero, Eric Shifrut, Thong T Nguyen, Kelsey M Haas, Harmit S Malik, Jennifer A Doudna, Andrew P May, Alexander Marson, Nevan J Krogan
A functional map of HIV-host interactions in primary human T cells. Nature communications 13 (1) (2022)
Arghavan Alisoltani, Lukasz Jaroszewski, Adam Godzik, Arash Iranzadeh, Lacy M Simons, Taylor J Dean, Ramon Lorenzo-Redondo, Judd F Hultquist, Egon A Ozer
ViralVar: A Web Tool for Multilevel Visualization of SARS-CoV-2 Genomes. Viruses 14 (12) (2022)
Arghavan Alisoltani, Lukasz Jaroszewski, Adam Godzik, Arash Iranzadeh, Lacy M Simons, Taylor J Dean, Ramon Lorenzo-Redondo, Judd F Hultquist, Egon A Ozer
ViralVar: A Web Tool for Multilevel Visualization of SARS-CoV-2 Genomes. Viruses 14 (12) (2022)
Melissa V Fernandez-de Céspedes, Huxley K Hoffman, Hannah Carter, Lacy M Simons, Lwar Naing, Sherimay D Ablan, David A Scheiblin, Judd F Hultquist, Schuyler B van Engelenburg, Eric O Freed
Rab11-FIP1C Is Dispensable for HIV-1 Replication in Primary CD4 + T Cells, but Its Role Is Cell Type Dependent in Immortalized Human T-Cell Lines. Journal of virology (2022)
Egon Anderson Ozer, Lacy M Simons, Moses Olubusuyi Adewumi, Adeola A Fowotade, Ewean C Omoruyi, Johnson A Adeniji, Oluseyi A Olayinka, Taylor J Dean, Janet Zayas, Pavan P Bhimalli, Michelle K Ash, Almoustapha I Maiga, Anou M Somboro, Mamoudou Maiga, Adam Godzik, Jeffrey R Schneider, João I Mamede, Babafemi O Taiwo, Judd F Hultquist, Ramon Lorenzo-Redondo
Multiple expansions of globally uncommon SARS-CoV-2 lineages in Nigeria. Nature communications 13 (1) (2022)
Arghavan Alisoltani, Lukasz Jaroszewski, Adam Godzik, Arash Iranzadeh, Lacy M Simons, Taylor J Dean, Ramon Lorenzo-Redondo, Judd F Hultquist, Egon A Ozer
ViralVar: A Web Tool for Multilevel Visualization of SARS-CoV-2 Genomes. Viruses 14 (12) (2022)
Arghavan Alisoltani, Lukasz Jaroszewski, Adam Godzik, Arash Iranzadeh, Lacy M Simons, Taylor J Dean, Ramon Lorenzo-Redondo, Judd F Hultquist, Egon A Ozer
ViralVar: A Web Tool for Multilevel Visualization of SARS-CoV-2 Genomes. Viruses 14 (12) (2022)
Anastasia Selyutina, Lacy M Simons, Karen A Kirby, Angel Bulnes-Ramos, Pan Hu, Stefan G Sarafianos, Judd F Hultquist, Felipe Diaz-Griffero
TRIM5α Restriction of HIV-1-N74D Viruses in Lymphocytes Is Caused by a Loss of Cyclophilin A Protection. Viruses 14 (2) (2022)
Patrick Madden, Yanique Thomas, Robert V Blair, Sadia Samer, Mark Doyle, Cecily Midkiff, Lara Doyle-Meyers, Mark E Becker, Shoaib Arif, Michael McRaven, Lacy M Simons, Ann Carias, Elena Martinelli, Ramon Lorenzo-Redondo, Judd F Hultquist, Francois Villinger, Ronald S Veazey, Thomas Hope
An immunoPET probe to SARS-CoV-2 reveals early infection of the male genital tract in rhesus macaques. Research square (2022)
Alexander L Lundberg, Ramon Lorenzo-Redondo, Judd F Hultquist, Claudia A Hawkins, Egon Anderson Ozer, Sarah B Welch, P V Vara Prasad, Chad J Achenbach, Janine I White, James Francis Oehmke, Robert Leo Murphy, Robert J Havey, Lori Ann Post
Overlapping Delta and Omicron Outbreaks During the COVID-19 Pandemic: Dynamic Panel Data Estimates. JMIR public health and surveillance 8 (6) (2022)
Arghavan Alisoltani, Lukasz Jaroszewski, Adam Godzik, Arash Iranzadeh, Lacy M Simons, Taylor J Dean, Ramon Lorenzo-Redondo, Judd F Hultquist, Egon A Ozer
ViralVar: A Web Tool for Multilevel Visualization of SARS-CoV-2 Genomes. Viruses 14 (12) (2022)
Alexander L Lundberg, Ramon Lorenzo-Redondo, Egon Anderson Ozer, Claudia A Hawkins, Judd F Hultquist, Sarah B Welch, P V Vara Prasad, James Francis Oehmke, Chad J Achenbach, Robert Leo Murphy, Janine I White, Robert J Havey, Lori Ann Post
Has Omicron Changed the Evolution of the Pandemic? JMIR public health and surveillance 8 (1) (2022)
William J Cisneros, Daphne Cornish, Judd F Hultquist
Application of CRISPR-Cas9 Gene Editing for HIV Host Factor Discovery and Validation. Pathogens (Basel, Switzerland) 11 (8) (2022)
Arghavan Alisoltani, Lukasz Jaroszewski, Adam Godzik, Arash Iranzadeh, Lacy M Simons, Taylor J Dean, Ramon Lorenzo-Redondo, Judd F Hultquist, Egon A Ozer
ViralVar: A Web Tool for Multilevel Visualization of SARS-CoV-2 Genomes. Viruses 14 (12) (2022)