Nikolay S Markov

ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 28

Top Venues

bioRxiv : the preprint server for biology

Nature immunology

medRxiv : the preprint server for health sciences

NPJ digital medicine

Northwestern University Feinberg School of Medicine

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Northwestern University Feinberg School of Medicine

United States

Bioinformatics postdoc :: Pulmonary and Critical Care

Publications

Catherine Aiyuan Gao, Nikolay S Markov, Chiagozie O Pickens, Anna E Pawlowski, Mengjia Kang, James M Walter, Benjamin David Singer, Richard G Wunderink
An observational cohort study of bronchoalveolar lavage fluid galactomannan and Aspergillus culture positivity in patients requiring mechanical ventilation. medRxiv : the preprint server for health sciences (2024)
Catherine Aiyuan Gao, Nikolay S Markov, Chiagozie O Pickens, Anna E Pawlowski, Mengjia Kang, James M Walter, Benjamin David Singer, Richard G Wunderink
An observational cohort study of bronchoalveolar lavage fluid galactomannan and Aspergillus culture positivity in patients requiring mechanical ventilation. medRxiv : the preprint server for health sciences (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology 25 (9) (2024)
Catherine Aiyuan Gao, Nikolay S Markov, Chiagozie O Pickens, Anna E Pawlowski, Mengjia Kang, James M Walter, Benjamin David Singer, Richard G Wunderink, null null
An observational cohort study of bronchoalveolar lavage fluid galactomannan and Aspergillus culture positivity in patients requiring mechanical ventilation. medRxiv : the preprint server for health sciences (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology (2024)
Catherine Aiyuan Gao, Nikolay S Markov, Chiagozie O Pickens, Anna E Pawlowski, Mengjia Kang, James M Walter, Benjamin David Singer, Richard G Wunderink, null null
An observational cohort study of bronchoalveolar lavage fluid galactomannan and Aspergillus culture positivity in patients requiring mechanical ventilation. medRxiv : the preprint server for health sciences (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke V Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. Nature immunology 25 (9) (2024)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Catherine Aiyuan Gao, Frederick M Howard, Nikolay S Markov, Emma C Dyer, Siddhi Ramesh, Yuan Luo, Alexander T Pearson
Comparing scientific abstracts generated by ChatGPT to real abstracts with detectors and blinded human reviewers. NPJ digital medicine 6 (1) (2023)
Catherine Aiyuan Gao, Frederick M Howard, Nikolay S Markov, Emma C Dyer, Siddhi Ramesh, Yuan Luo, Alexander T Pearson
Comparing scientific abstracts generated by ChatGPT to real abstracts with detectors and blinded human reviewers. NPJ digital medicine 6 (1) (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Lisa Sikkema, Ciro Ramírez-Suástegui, Daniel C Strobl, Tessa E Gillett, Luke Zappia, Elo Madissoon, Nikolay S Markov, Laure-Emmanuelle Zaragosi, Yuge Ji, Meshal Ansari, Marie-Jeanne Arguel, Leonie Apperloo, Martin Banchero, Christophe Bécavin, Marijn Berg, Evgeny Chichelnitskiy, Mei-I Chung, Antoine Collin, Aurore C A Gay, Janine Gote-Schniering, Baharak Hooshiar Kashani, Kemal Inecik, Manu Jain, Theodore S Kapellos, Tessa M Kole, Sylvie Leroy, Christoph H Mayr, Amanda J Oliver, Michael von Papen, Lance Peter, Chase J Taylor, Thomas Walzthoeni, Chuan Xu, Linh T Bui, Carlo De Donno, Leander Dony, Alen Faiz, Minzhe Guo, Austin J Gutierrez, Lukas Heumos, Ni Huang, Ignacio L Ibarra, Nathan D Jackson, Preetish Kadur Lakshminarasimha Murthy, Mohammad Lotfollahi, Tracy Tabib, Carlos Talavera-López, Kyle J Travaglini, Anna Wilbrey-Clark, Kaylee B Worlock, Masahiro Yoshida, null null, Maarten van den Berge, Yohan Bosse, Tushar J Desai, Oliver Eickelberg, Naftali Kaminski, Mark A Krasnow, Robert A Lafyatis, Marko Z Nikolić, Joseph E Powell, Jayaraj Rajagopal, Mauricio Rojas, Orit Rozenblatt-Rosen, Max A Seibold, Dean Sheppard, Douglas P Shepherd, Don D Sin, Hidde J Haisma, Alexander M Tsankov, Jeffrey A Whitsett, Yan Xu, Nicholas E Banovich, Pascal Barbry, Elizabeth Thu Duong, Christine S Falk, Kerstin B Meyer, Jonathan A Kropski, Dana Pe'er, Herbert B Schiller, Purushothama Rao Tata, Joachim L Schultze, Sarah A Teichmann, Alexander V Misharin, Martijn C Nawijn, Malte Daniel Luecken, Fabian Joachim Theis
An integrated cell atlas of the lung in health and disease. Nature medicine (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Nikolay S Markov, Ziyou Ren, Karolina J Senkow, Rogan A Grant, Catherine Aiyuan Gao, Elizabeth S Malsin, Lango Sichizya, Hermon Kihshen, Kathryn A Helmin, Milica Jovisic, Jason M Arnold, Xóchitl G Pérez-Leonor, Hiam Abdala-Valencia, Suchitra Swaminathan, Julu Nwaezeapu, Mengjia Kang, Luke Rasmussen, Egon Anderson Ozer, Ramon Lorenzo-Redondo, Judd F Hultquist, Lacy M Simons, Estefany R Guzman, Alexander V Misharin, Richard G Wunderink, G R Scott Budinger, Benjamin David Singer, Luisa Morales-Nebreda, null null
A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia. bioRxiv : the preprint server for biology (2023)
Catherine Aiyuan Gao, Frederick M Howard, Nikolay S Markov, Emma C Dyer, Siddhi Ramesh, Yuan Luo, Alexander T Pearson
Comparing scientific abstracts generated by ChatGPT to real abstracts with detectors and blinded human reviewers. NPJ digital medicine 6 (1) (2023)
Rogan A Grant, Luisa Morales-Nebreda, Nikolay S Markov, Suchitra Swaminathan, Melissa Querrey, Estefany R Guzman, Darryl A Abbott, Helen K Donnelly, Alvaro Donayre, Isaac A Goldberg, Zasu M Klug, Nicole Borkowski, Ziyan Lu, Hermon Kihshen, Yuliya Politanska, Lango Sichizya, Mengjia Kang, Ali Shilatifard, Chao Qi, Jon W Lomasney, A Christine Argento, Jacqueline M Kruser, Elizabeth S Malsin, Chiagozie O Pickens, Sean B Smith, James M Walter, Anna E Pawlowski, Daniel Schneider, Prasanth Nannapaneni, Hiam Abdala-Valencia, Ankit Bharat, Cara J Gottardi, G R Scott Budinger, Alexander V Misharin, Benjamin David Singer, Richard G Wunderink, null null
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Nature 590 (7847) (2021)
Satoshi Watanabe, Nikolay S Markov, Ziyan Lu, Raul Piseaux Aillon, Saul Soberanes, Constance E Runyan, Ziyou Ren, Rogan A Grant, Mariana M Herrerias, Hiam Abdala-Valencia, Yuliya Politanska, Kiwon Nam, Lango Sichizya, Hermon G Kihshen, Nikita Joshi, Alexandra C McQuattie-Pimentel, Katherine A Gruner, Manu Jain, Jacob I Sznajder, Richard I Morimoto, Paul A Reyfman, Cara J Gottardi, G R Scott Budinger, Alexander V Misharin
Resetting proteostasis with ISRIB promotes epithelial differentiation to attenuate pulmonary fibrosis. Proceedings of the National Academy of Sciences of the United States of America 118 (20) (2021)
Ankit Bharat, Melissa Querrey, Nikolay S Markov, Samuel S Kim, Chitaru Kurihara, Rafael Garza-Castillon, Adwaiy Manerikar, Ali Shilatifard, Rade Tomic, Yuliya Politanska, Hiam Abdala-Valencia, Anjana V Yeldandi, Jon W Lomasney, Alexander V Misharin, G R Scott Budinger
Lung transplantation for patients with severe COVID-19. Science translational medicine 12 (574) (2020)
Constance E Runyan, Lynn C Welch, Emilia Lecuona, Masahiko Shigemura, Luciano Amarelle, Hiam Abdala-Valencia, Nikita Joshi, Ziyan Lu, Kiwon Nam, Nikolay S Markov, Alexandra C McQuattie-Pimentel, Raul Piseaux-Aillon, Yuliya Politanska, Lango Sichizya, Satoshi Watanabe, Kinola J N Williams, G R Scott Budinger, Jacob I Sznajder, Alexander V Misharin
Impaired phagocytic function in CX3CR1+ tissue-resident skeletal muscle macrophages prevents muscle recovery after influenza A virus-induced pneumonia in old mice. Aging cell 19 (9) (2020)
Ankit Bharat, Melissa Querrey, Nikolay S Markov, Samuel S Kim, Chitaru Kurihara, Rafael Garza-Castillon, Adwaiy Manerikar, Ali Shilatifard, Rade Tomic, Yuliya Politanska, Hiam Abdala-Valencia, Anjana V Yeldandi, Jon W Lomasney, Alexander V Misharin, G R Scott Budinger
Lung transplantation for pulmonary fibrosis secondary to severe COVID-19. medRxiv : the preprint server for health sciences (2020)
Rogan A Grant, Luisa Morales-Nebreda, Nikolay S Markov, Suchitra Swaminathan, Estefany R Guzman, Darryl A Abbott, Helen K Donnelly, Alvaro Donayre, Isaac A Goldberg, Zasu M Klug, Nicole Borkowski, Ziyan Lu, Hermon Kihshen, Yuliya Politanska, Lango Sichizya, Mengjia Kang, Ali Shilatifard, Chao Qi, A Christine Argento, Jacqueline M Kruser, Elizabeth S Malsin, Chiagozie O Pickens, Sean B Smith, James M Walter, Anna E Pawlowski, Daniel Schneider, Prasanth Nannapaneni, Hiam Abdala-Valencia, Ankit Bharat, Cara J Gottardi, G R Scott Budinger, Alexander V Misharin, Benjamin David Singer, Richard G Wunderink, null null
Alveolitis in severe SARS-CoV-2 pneumonia is driven by self-sustaining circuits between infected alveolar macrophages and T cells. bioRxiv : the preprint server for biology (2020)

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Publication Activity (10 Years)

Top Topics

Top Venues

Nikolay S Markov