Julian Uszkoreit

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 23

Top Topics

Mass Spectrometry

Chronic Obstructive Pulmonary Disease

Quality Control

Top Venues

Journal of proteome research

Expert review of proteomics

Rapid communications in mass spectrometry : RCM

This page only lists publications with an associated author ORCID identifier.

Publications

Julian Uszkoreit, Magnus Palmblad, Veit Schwämmle
Tackling reproducibility: lessons for the proteomics community. Expert review of proteomics (2024)
Julian Uszkoreit, Magnus Palmblad, Veit Schwämmle
Tackling reproducibility: lessons for the proteomics community. Expert review of proteomics 21 (1-3) (2024)
Julian Uszkoreit, Magnus Palmblad, Veit Schwämmle
Tackling reproducibility: lessons for the proteomics community. Expert review of proteomics 21 (1-3) (2024)
Julian Uszkoreit, Magnus Palmblad, Veit Schwämmle
Tackling reproducibility: lessons for the proteomics community. Expert review of proteomics (2024)
Julian Uszkoreit, Magnus Palmblad, Veit Schwämmle
Tackling reproducibility: lessons for the proteomics community. Expert review of proteomics 21 (1-3) (2024)
Svitlana Rozanova, Julian Uszkoreit, Karin Schork, Bettina Serschnitzki, Martin Eisenacher, Lars Tönges, Katalin Barkovits, Katrin Marcus
Quality Control-A Stepchild in Quantitative Proteomics: A Case Study for the Human CSF Proteome. Biomolecules 13 (3) (2023)
Svitlana Rozanova, Julian Uszkoreit, Karin Schork, Bettina Serschnitzki, Martin Eisenacher, Lars Tönges, Katalin Barkovits, Katrin Marcus
Quality Control-A Stepchild in Quantitative Proteomics: A Case Study for the Human CSF Proteome. Biomolecules 13 (3) (2023)
Benjamin A Neely, Viktoria Dorfer, Lennart Martens, Isabell Bludau, Robbin Bouwmeester, Sven Degroeve, Eric W Deutsch, Siegfried Gessulat, Lukas Käll, Pawel Palczynski, Samuel H Payne, Tobias Greisager Rehfeldt, Tobias K Schmidt, Veit Schwämmle, Julian Uszkoreit, Juan Antonio Vizcaino, Mathias Wilhelm, Magnus Palmblad
Toward an Integrated Machine Learning Model of a Proteomics Experiment. Journal of proteome research (2023)
Benjamin A Neely, Viktoria Dorfer, Lennart Martens, Isabell Bludau, Robbin Bouwmeester, Sven Degroeve, Eric W Deutsch, Siegfried Gessulat, Lukas Käll, Pawel Palczynski, Samuel H Payne, Tobias Greisager Rehfeldt, Tobias K Schmidt, Veit Schwämmle, Julian Uszkoreit, Juan Antonio Vizcaino, Mathias Wilhelm, Magnus Palmblad
Toward an Integrated Machine Learning Model of a Proteomics Experiment. Journal of proteome research 22 (3) (2023)
Benjamin A Neely, Viktoria Dorfer, Lennart Martens, Isabell Bludau, Robbin Bouwmeester, Sven Degroeve, Eric W Deutsch, Siegfried Gessulat, Lukas Käll, Pawel Palczynski, Samuel H Payne, Tobias Greisager Rehfeldt, Tobias K Schmidt, Veit Schwämmle, Julian Uszkoreit, Juan Antonio Vizcaino, Mathias Wilhelm, Magnus Palmblad
Toward an Integrated Machine Learning Model of a Proteomics Experiment. Journal of proteome research 22 (3) (2023)
Benjamin A Neely, Viktoria Dorfer, Lennart Martens, Isabell Bludau, Robbin Bouwmeester, Sven Degroeve, Eric W Deutsch, Siegfried Gessulat, Lukas Käll, Pawel Palczynski, Samuel H Payne, Tobias Greisager Rehfeldt, Tobias K Schmidt, Veit Schwämmle, Julian Uszkoreit, Juan Antonio Vizcaino, Mathias Wilhelm, Magnus Palmblad
Toward an Integrated Machine Learning Model of a Proteomics Experiment. Journal of proteome research 22 (3) (2023)
Benjamin A Neely, Viktoria Dorfer, Lennart Martens, Isabell Bludau, Robbin Bouwmeester, Sven Degroeve, Eric W Deutsch, Siegfried Gessulat, Lukas Käll, Pawel Palczynski, Samuel H Payne, Tobias Greisager Rehfeldt, Tobias K Schmidt, Veit Schwämmle, Julian Uszkoreit, Juan Antonio Vizcaino, Mathias Wilhelm, Magnus Palmblad
Toward an Integrated Machine Learning Model of a Proteomics Experiment. Journal of proteome research 22 (3) (2023)
Benjamin A Neely, Viktoria Dorfer, Lennart Martens, Isabell Bludau, Robbin Bouwmeester, Sven Degroeve, Eric W Deutsch, Siegfried Gessulat, Lukas Käll, Pawel Palczynski, Samuel H Payne, Tobias Greisager Rehfeldt, Tobias K Schmidt, Veit Schwämmle, Julian Uszkoreit, Juan Antonio Vizcaino, Mathias Wilhelm, Magnus Palmblad
Toward an Integrated Machine Learning Model of a Proteomics Experiment. Journal of proteome research 22 (3) (2023)
David Bouyssié, Pınar Altıner, Salvador Capella-Gutierrez, José María Fernandez, Yanick Paco Hagemeijer, Peter L Horvatovich, Martin Hubalek, Fredrik Levander, Pierluigi Mauri, Magnus Palmblad, Wolfgang Raffelsberger, Laura Rodríguez-Navas, Dario Di Silvestre, Balázs Tibor Kunkli, Julian Uszkoreit, Yves Vandenbrouck, Juan Antonio Vizcaino, Dirk Winkelhardt, Veit Schwämmle
WOMBAT-P: Benchmarking Label-Free Proteomics Data Analysis Workflows. Journal of proteome research (2023)
Svitlana Rozanova, Julian Uszkoreit, Karin Schork, Bettina Serschnitzki, Martin Eisenacher, Lars Tönges, Katalin Barkovits, Katrin Marcus
Quality Control-A Stepchild in Quantitative Proteomics: A Case Study for the Human CSF Proteome. Biomolecules 13 (3) (2023)
Thilo Bracht, Daniel Kleefisch, Karin Schork, Kathrin E Witzke, Weiqiang Chen, Malte Bayer, Jan Hovanec, Georg Johnen, Swetlana Meier, Yon-Dschun Ko, Thomas Behrens, Thomas Brüning, Jana Fassunke, Reinhard Buttner, Julian Uszkoreit, Michael Adamzik, Martin Eisenacher, Barbara Sitek
Plasma Proteomics Enable Differentiation of Lung Adenocarcinoma from Chronic Obstructive Pulmonary Disease (COPD). International journal of molecular sciences 23 (19) (2022)
Karin Schork, Michael Turewicz, Julian Uszkoreit, Jörg Rahnenführer, Martin Eisenacher
Characterization of peptide-protein relationships in protein ambiguity groups via bipartite graphs. PloS one 17 (10) (2022)
Chengxin Dai, Anja Füllgrabe, Julianus Pfeuffer, Elizaveta M Solovyeva, Jingwen Deng, Pablo Moreno, Selvakumar Kamatchinathan, Deepti Jaiswal Kundu, Nancy George, Silvie Fexova, Bjoern Andreas Gruening, Melanie Christine Föll, Johannes Griss, Marc Vaudel, Enrique Audain, Marie Locard-Paulet, Michael Turewicz, Martin Eisenacher, Julian Uszkoreit, Tim Van Den Bossche, Veit Schwämmle, Henry Webel, Stefan Schulze, David Bouyssié, Savita Jayaram, Vinay Kumar Duggineni, Patroklos Samaras, Mathias Wilhelm, Meena Choi, Mingxun Wang, Oliver Kohlbacher, Alvis Brazma, Irene Papatheodorou, Nuno Bandeira, Eric W Deutsch, Juan Antonio Vizcaino, Mingze Bai, Timo Sachsenberg, Lev I Levitsky, Yasset Perez Riverol
A proteomics sample metadata representation for multiomics integration and big data analysis. Nature communications 12 (1) (2021)
Julian Uszkoreit, Dirk Winkelhardt, Katalin Barkovits, Maximilian Wulf, Sascha Roocke, Katrin Marcus, Martin Eisenacher
MaCPepDB: A Database to Quickly Access All Tryptic Peptides of the UniProtKB. Journal of proteome research 20 (4) (2021)
Wout Bittremieux, David Bouyssié, Viktoria Dorfer, Marie Locard-Paulet, Yasset Perez Riverol, Veit Schwämmle, Julian Uszkoreit, Tim Van Den Bossche
The European Bioinformatics Community for Mass Spectrometry (EuBIC-MS): an open community for bioinformatics training and research. Rapid communications in mass spectrometry : RCM (2021)
Katalin Barkovits, Andreas Linden, Sara Galozzi, Lukas Schilde, Sandra Pacharra, Brit Mollenhauer, Nadine Stoepel, Simone Steinbach, Caroline May, Julian Uszkoreit, Martin Eisenacher, Katrin Marcus
Characterization of Cerebrospinal Fluid via Data-Independent Acquisition Mass Spectrometry. Journal of proteome research 17 (10) (2018)
Julian Uszkoreit, Yasset Perez-Riverol, Britta Eggers, Katrin Marcus, Martin Eisenacher
Protein Inference Using PIA Workflows and PSI Standard File Formats. Journal of proteome research 18 (2) (2018)
Yasset Perez-Riverol, Laurent Gatto, Rui Wang, Timo Sachsenberg, Julian Uszkoreit, Felipe da Veiga Leprevost, Christian Fufezan, Tobias Ternent, Stephen J Eglen, Daniel S Katz, Tom J Pollard, Alexander Konovalov, Robert M Flight, Kai Blin, Juan Antonio Vizcaino
Ten Simple Rules for Taking Advantage of Git and GitHub. PLoS computational biology 12 (7) (2016)