Jüri Reimand

ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 24

Top Venues

Nature communications

The EMBO journal

Nature

Science advances

University of Toronto

University of Tartu (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Toronto

Canada

Assistant professor :: Department of Medical Biophysics

Ontario Institute for Cancer Research

Canada

Principal Investigator :: Computational Biology Program

Education History

University of Tartu

Estonia

PHD :: Department of Computer Science

Publications

Alexander T Bahcheli, Hyun-Kee Min, Masroor Bayati, Hongyu Zhao, Alexander Fortuna, Weifan Dong, Irakli Dzneladze, Jade Chan, Xin Chen, Kissy Guevara-Hoyer, Peter B Dirks, Xi Huang, Jüri Reimand
Pan-cancer ion transport signature reveals functional regulators of glioblastoma aggression. The EMBO journal (2024)
Mykhaylo Slobodyanyuk, Alexander T Bahcheli, Zoe P Klein, Masroor Bayati, Lisa J Strug, Jüri Reimand
Directional integration and pathway enrichment analysis for multi-omics data. Nature communications 15 (1) (2024)
Mykhaylo Slobodyanyuk, Alexander T Bahcheli, Zoe P Klein, Masroor Bayati, Lisa J Strug, Jüri Reimand
Directional integration and pathway enrichment analysis for multi-omics data. Nature communications 15 (1) (2024)
Mykhaylo Slobodyanyuk, Alexander T Bahcheli, Zoe P Klein, Masroor Bayati, Lisa J Strug, Jüri Reimand
Directional integration and pathway enrichment analysis for multi-omics data. Nature communications 15 (1) (2024)
Alexander T Bahcheli, Hyun-Kee Min, Masroor Bayati, Hongyu Zhao, Alexander Fortuna, Weifan Dong, Irakli Dzneladze, Jade Chan, Xin Chen, Kissy Guevara-Hoyer, Peter B Dirks, Xi Huang, Jüri Reimand
Pan-cancer ion transport signature reveals functional regulators of glioblastoma aggression. The EMBO journal (2024)
Mykhaylo Slobodyanyuk, Alexander T Bahcheli, Zoe P Klein, Masroor Bayati, Lisa J Strug, Jüri Reimand
Directional integration and pathway enrichment analysis for multi-omics data. Nature communications 15 (1) (2024)
Alexander T Bahcheli, Hyun-Kee Min, Masroor Bayati, Hongyu Zhao, Alexander Fortuna, Weifan Dong, Irakli Dzneladze, Jade Chan, Xin Chen, Kissy Guevara-Hoyer, Peter B Dirks, Xi Huang, Jüri Reimand
Pan-cancer ion transport signature reveals functional regulators of glioblastoma aggression. The EMBO journal 43 (2) (2024)
Alexander T Bahcheli, Hyun-Kee Min, Masroor Bayati, Hongyu Zhao, Alexander Fortuna, Weifan Dong, Irakli Dzneladze, Jade Chan, Xin Chen, Kissy Guevara-Hoyer, Peter B Dirks, Xi Huang, Jüri Reimand
Pan-cancer ion transport signature reveals functional regulators of glioblastoma aggression. The EMBO journal 43 (2) (2024)
Alexander T Bahcheli, Hyun-Kee Min, Masroor Bayati, Hongyu Zhao, Alexander Fortuna, Weifan Dong, Irakli Dzneladze, Jade Chan, Xin Chen, Kissy Guevara-Hoyer, Peter B Dirks, Xi Huang, Jüri Reimand
Pan-cancer ion transport signature reveals functional regulators of glioblastoma aggression. The EMBO journal 43 (2) (2024)
Nina Adler, Alexander T Bahcheli, Kevin C L Cheng, Khalid N Al-Zahrani, Mykhaylo Slobodyanyuk, Diogo Vieira da Silva Pellegrina, Daniel Schramek, Jüri Reimand
Mutational processes of tobacco smoking and APOBEC activity generate protein-truncating mutations in cancer genomes. Science advances 9 (44) (2023)
Michelle M Kameda-Smith, Helen Zhu, En-Ching Luo, Yujin Suk, Agata Xella, Brian A Yee, Chirayu Chokshi, Sansi Xing, Frederick Tan, Raymond G Fox, Ashley A Adile, David Bakhshinyan, Kevin R Brown, William D Gwynne, Minomi Subapanditha, Petar Miletic, Daniel Picard, Ian Burns, Jason Moffat, Kamil Paruch, Adam J Fleming, Kristin Hope, John P Provias, Marc Remke, Yu Lu, Tannishtha Reya, Chitra Venugopal, Jüri Reimand, Robert J Wechsler-Reya, Gene W Yeo, Sheila K Singh
Author Correction: Characterization of an RNA binding protein interactome reveals a context-specific post-transcriptional landscape of MYC-amplified medulloblastoma. Nature communications 14 (1) (2023)
Michelle M Kameda-Smith, Helen Zhu, En-Ching Luo, Yujin Suk, Agata Xella, Brian A Yee, Chirayu Chokshi, Sansi Xing, Frederick Tan, Raymond G Fox, Ashley A Adile, David Bakhshinyan, Kevin R Brown, William D Gwynne, Minomi Subapanditha, Petar Miletic, Daniel Picard, Ian Burns, Jason Moffat, Kamil Paruch, Adam J Fleming, Kristin Hope, John P Provias, Marc Remke, Yu Lu, Tannishtha Reya, Chitra Venugopal, Jüri Reimand, Robert J Wechsler-Reya, Gene W Yeo, Sheila K Singh
Author Correction: Characterization of an RNA binding protein interactome reveals a context-specific post-transcriptional landscape of MYC-amplified medulloblastoma. Nature communications 14 (1) (2023)
Marta Paczkowska, Jonathan Barenboim, Nardnisa Sintupisut, Natalie S Fox, Helen Zhu, Diala Abd-Rabbo, Miles W Mee, Paul C Boutros, null null, Jüri Reimand, null null
Author Correction: Integrative pathway enrichment analysis of multivariate omics data. Nature communications 13 (1) (2022)
Liam D Hendrikse, Parthiv Haldipur, Olivier Saulnier, Jake Millman, Alexandria H Sjoboen, Anders Wilder Erickson, Winnie Ong, Victor Gordon, Ludivine Coudière-Morrison, Audrey L Mercier, Mohammad Shokouhian, Raúl A Suárez, Michelle Ly, Stephanie Borlase, David S Scott, Maria C Vladoiu, Hamza Farooq, Olga Sirbu, Takuma Nakashima, Shohei Nambu, Yusuke Funakoshi, Alec Bahcheli, J Javier Diaz-Mejia, Joseph Golser, Kathleen Bach, Tram Phuong-Bao, Patryk Skowron, Evan Y Wang, Sachin A Kumar, Polina Balin, Abhirami Visvanathan, John J Y Lee, Ramy Ayoub, Xin Chen, Xiaodi Chen, Karen L Mungall, Betty Luu, Pierre Bérubé, Yu C Wang, Stefan M Pfister, Seung-Ki Kim, Olivier O Delattre, Franck Bourdeaut, François Doz, Julien Masliah-Planchon, Wieslawa A Grajkowska, James Loukides, Peter B Dirks, Michelle Fèvre-Montange, Anne Jouvet, Pim J French, Johan M Kros, Karel Zitterbart, Swneke D Bailey, Charles G Eberhart, Amulya A N Rao, Caterina Giannini, James M Olson, Miklós Garami, Peter Hauser, Joanna J Phillips, Young S Ra, Carmen de Torres, Jaume Mora, Kay K W Li, Ho-Keung Ng, Wai S Poon, Ian F Pollack, Enrique López-Aguilar, G Yancey Gillespie, Timothy E Van Meter, Tomoko Shofuda, Rajeev Vibhakar, Reid C Thompson, Michael K Cooper, Joshua B Rubin, Toshihiro Kumabe, Shin Jung, Boleslaw Lach, Achille Iolascon, Veronica Ferrucci, Pasqualino de Antonellis, Massimo Zollo, Giuseppe Cinalli, Shenandoah Robinson, Duncan S Stearns, Erwin G Van Meir, Paola Porrati, Gaetano Finocchiaro, Maura Massimino, Carlos G Carlotti, Claudia C Faria, Martine F Roussel, Frederick Boop, Jennifer A Chan, Kimberly A Aldinger, Ferechte Razavi, Evelina Silvestri, Roger E McLendon, Eric Michael Thompson, Marc Ansari, Maria L Garre, Fernando Chico, Pilar Eguía, Mario Pérezpeña, A Sorana Morrissy, Florence M G Cavalli, Xiaochong Wu, Craig Daniels, Jeremy N Rich, Steven J M Jones, Richard A Moore, Marco A Marra, Xi Huang, Jüri Reimand, Poul H Sorensen, Robert J Wechsler-Reya, William A Weiss, Trevor J Pugh, Livia Garzia, Claudia L Kleinman, Lincoln D Stein, Nada Jabado, David Malkin, Olivier Ayrault, Jeffrey A Golden, David W Ellison, Bradley W Doble, Vijay Ramsawami, Tamra E Werbowetski-Ogilvie, Hiromichi Suzuki, Kathleen J Millen, Michael D Taylor
Failure of human rhombic lip differentiation underlies medulloblastoma formation. Nature 609 (7929) (2022)
Liam D Hendrikse, Parthiv Haldipur, Olivier Saulnier, Jake Millman, Alexandria H Sjoboen, Anders Wilder Erickson, Winnie Ong, Victor Gordon, Ludivine Coudière-Morrison, Audrey L Mercier, Mohammad Shokouhian, Raúl A Suárez, Michelle Ly, Stephanie Borlase, David S Scott, Maria C Vladoiu, Hamza Farooq, Olga Sirbu, Takuma Nakashima, Shohei Nambu, Yusuke Funakoshi, Alec Bahcheli, J Javier Diaz-Mejia, Joseph Golser, Kathleen Bach, Tram Phuong-Bao, Patryk Skowron, Evan Y Wang, Sachin A Kumar, Polina Balin, Abhirami Visvanathan, John J Y Lee, Ramy Ayoub, Xin Chen, Xiaodi Chen, Karen L Mungall, Betty Luu, Pierre Bérubé, Yu C Wang, Stefan M Pfister, Seung-Ki Kim, Olivier O Delattre, Franck Bourdeaut, François Doz, Julien Masliah-Planchon, Wieslawa A Grajkowska, James Loukides, Peter B Dirks, Michelle Fèvre-Montange, Anne Jouvet, Pim J French, Johan M Kros, Karel Zitterbart, Swneke D Bailey, Charles G Eberhart, Amulya A N Rao, Caterina Giannini, James M Olson, Miklós Garami, Peter Hauser, Joanna J Phillips, Young S Ra, Carmen de Torres, Jaume Mora, Kay K W Li, Ho-Keung Ng, Wai S Poon, Ian F Pollack, Enrique López-Aguilar, G Yancey Gillespie, Timothy E Van Meter, Tomoko Shofuda, Rajeev Vibhakar, Reid C Thompson, Michael K Cooper, Joshua B Rubin, Toshihiro Kumabe, Shin Jung, Boleslaw Lach, Achille Iolascon, Veronica Ferrucci, Pasqualino de Antonellis, Massimo Zollo, Giuseppe Cinalli, Shenandoah Robinson, Duncan S Stearns, Erwin G Van Meir, Paola Porrati, Gaetano Finocchiaro, Maura Massimino, Carlos G Carlotti, Claudia C Faria, Martine F Roussel, Frederick Boop, Jennifer A Chan, Kimberly A Aldinger, Ferechte Razavi, Evelina Silvestri, Roger E McLendon, Eric Michael Thompson, Marc Ansari, Maria L Garre, Fernando Chico, Pilar Eguía, Mario Pérezpeña, A Sorana Morrissy, Florence M G Cavalli, Xiaochong Wu, Craig Daniels, Jeremy N Rich, Steven J M Jones, Richard A Moore, Marco A Marra, Xi Huang, Jüri Reimand, Poul H Sorensen, Robert J Wechsler-Reya, William A Weiss, Trevor J Pugh, Livia Garzia, Claudia L Kleinman, Lincoln D Stein, Nada Jabado, David Malkin, Olivier Ayrault, Jeffrey A Golden, David W Ellison, Bradley W Doble, Vijay Ramsawami, Tamra E Werbowetski-Ogilvie, Hiromichi Suzuki, Kathleen J Millen, Michael D Taylor
Author Correction: Failure of human rhombic lip differentiation underlies medulloblastoma formation. Nature (2022)
Diogo Vieira da Silva Pellegrina, Alexander T Bahcheli, Michal Krassowski, Jüri Reimand
Human phospho-signaling networks of SARS-CoV-2 infection are rewired by population genetic variants. Molecular systems biology 18 (5) (2022)
Oliver Ocsenas, Jüri Reimand
Chromatin accessibility of primary human cancers ties regional mutational processes and signatures with tissues of origin. PLoS computational biology 18 (8) (2022)
Michelle M Kameda-Smith, Helen Zhu, En-Ching Luo, Yujin Suk, Agata Xella, Brian A Yee, Chirayu Chokshi, Sansi Xing, Frederick Tan, Raymond G Fox, Ashley A Adile, David Bakhshinyan, Kevin R Brown, William D Gwynne, Minomi Subapanditha, Petar Miletic, Daniel Picard, Ian Burns, Jason Moffat, Kamil Paruch, Adam J Fleming, Kristin Hope, John P Provias, Marc Remke, Yu Lu, Tannishtha Reya, Chitra Venugopal, Jüri Reimand, Robert J Wechsler-Reya, Gene W Yeo, Sheila K Singh
Characterization of an RNA binding protein interactome reveals a context-specific post-transcriptional landscape of MYC-amplified medulloblastoma. Nature communications 13 (1) (2022)
Matthew A Reyna, David Haan, Marta Paczkowska, Lieven P C Verbeke, Miguel Vazquez, Alexandre Thiéry, Sergio Pulido-Tamayo, Jonathan Barenboim, Lina Wadi, Priyanka Dhingra, Raunak Shrestha, Gad A Getz, Michael S Lawrence, Jakob Skou Pedersen, Mark A Rubin, David A Wheeler, Søren Brunak, Jose M G Izarzugaza, Ekta Khurana, Kathleen Marchal, Christian von Mering, S Cenk Sahinalp, Alfonso Valencia, null null, Jüri Reimand, Joshua M Stuart, Benjamin J Raphael, null null
Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes. Nature communications 13 (1) (2022)
Patryk Skowron, Hamza Farooq, Florence M G Cavalli, A Sorana Morrissy, Michelle Ly, Liam D Hendrikse, Evan Y Wang, Haig Hugo Vrej Djambazian, Helen Zhu, Karen L Mungall, Quang M Trinh, Tina Zheng, Shizhong Dai, Ana S Guerreiro Stucklin, Maria C Vladoiu, Vernon Fong, Borja L Holgado, Carolina Nor, Xiaochong Wu, Diala Abd-Rabbo, Pierre Bérubé, Yu Chang Wang, Betty Luu, Raul A Suarez, Avesta Rastan, Aaron H Gillmor, John J Y Lee, Xiao Yun Zhang, Craig Daniels, Peter B Dirks, David Malkin, Eric Bouffet, Uri Tabori, James Loukides, François P Doz, Franck Bourdeaut, Olivier O Delattre, Julien Masliah-Planchon, Olivier Ayrault, Seung-Ki Kim, David Meyronet, Wieslawa A Grajkowska, Carlos G Carlotti, Carmen de Torres, Jaume Mora, Charles G Eberhart, Erwin G Van Meir, Toshihiro Kumabe, Pim J French, Johan M Kros, Nada Jabado, Boleslaw Lach, Ian F Pollack, Ronald L Hamilton, Amulya A Nageswara Rao, Caterina Giannini, James M Olson, László Bognár, Almos Klekner, Karel Zitterbart, Joanna J Phillips, Reid C Thompson, Michael K Cooper, Joshua B Rubin, Linda M Liau, Miklós Garami, Peter Hauser, Kay Ka Wai Li, Ho-Keung Ng, Wai Sang Poon, G Yancey Gillespie, Jennifer A Chan, Shin Jung, Roger E McLendon, Eric M Thompson, David Zagzag, Rajeev Vibhakar, Young Shin Ra, Maria Luisa Garre, Ulrich Schüller, Tomoko Shofuda, Claudia C Faria, Enrique López-Aguilar, Gelareh Zadeh, Chi-Chung Hui, Vijay Ramsawami, Swneke D Bailey, Steven J M Jones, Andrew J Mungall, Richard A Moore, John A Calarco, Lincoln D Stein, Gary D Baider, Jüri Reimand, Jiannis Ragoussis, William A Weiss, Marco A Marra, Hiromichi Suzuki, Michael D Taylor
The transcriptional landscape of Shh medulloblastoma. Nature communications 12 (1) (2021)
Christian A Lee, Diala Abd-Rabbo, Jüri Reimand
Functional and genetic determinants of mutation rate variability in regulatory elements of cancer genomes. Genome biology 22 (1) (2021)
Nathan F Schachter, Jessica R Adams, Patryk Skowron, Katelyn J Kozma, Christian A Lee, Nandini Raghuram, Joanna Yang, Amanda J Loch, Wei Wang, Aaron Kucharczuk, Katherine L Wright, Rita M Quintana, Yeji An, Daniel Dotzko, Jennifer L Gorman, Daria Wojtal, Juhi S Shah, Paul Leon-Gomez, Giovanna Pellecchia, Adam J Dupuy, Charles M Perou, Ittai Ben-Porath, Rotem Karni, Eldad Zacksenhaus, Jim R Woodgett, Susan J Done, Livia Garzia, A Sorana Morrissy, Jüri Reimand, Michael D Taylor, Sean E Egan
Single allele loss-of-function mutations select and sculpt conditional cooperative networks in breast cancer. Nature communications 12 (1) (2021)
Marta Paczkowska, Jonathan Barenboim, Nardnisa Sintupisut, Natalie S Fox, Helen Zhu, Diala Abd-Rabbo, Miles W Mee, Paul C Boutros, null null, Jüri Reimand, null null
Integrative pathway enrichment analysis of multivariate omics data. Nature communications 11 (1) (2020)
Matthew A Reyna, David Haan, Marta Paczkowska, Lieven P C Verbeke, Miguel Vazquez, Alexandre Thiéry, Sergio Pulido-Tamayo, Jonathan Barenboim, Lina Wadi, Priyanka Dhingra, Raunak Shrestha, Gad A Getz, Michael S Lawrence, Jakob Skou Pedersen, Mark A Rubin, David A Wheeler, Søren Brunak, Jose M G Izarzugaza, Ekta Khurana, Kathleen Marchal, Christian von Mering, S Cenk Sahinalp, Alfonso Valencia, null null, Jüri Reimand, Joshua M Stuart, Benjamin J Raphael, null null
Pathway and network analysis of more than 2500 whole cancer genomes. Nature communications 11 (1) (2020)

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Publication Activity (10 Years)

Top Topics

Top Venues

Jüri Reimand