Lukas Reiter

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 23

Top Topics

Mass Spectrometry

Machine Learning

Histone Deacetylase

Top Venues

Nature protocols

Journal of proteome research

Nature communications

bioRxiv : the preprint server for biology

Biognosys

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Biognosys

Switzerland

CTO :: R&D

Publications

Sandip Kumar Patel, Joanna Bons, Jacob P Rose, Jessie R Chappel, Rebecca L Beres, Mark A Watson, Corey Webster, Jordan B Burton, Roland Bruderer, Pierre-Yves Desprez, Lukas Reiter, Judith Campisi, Erin S Baker, Birgit Schilling
Exosomes Released from Senescent Cells and Circulatory Exosomes Isolated from Human Plasma Reveal Aging-associated Proteomic and Lipid Signatures. bioRxiv : the preprint server for biology (2024)
Sandip Kumar Patel, Joanna Bons, Jacob P Rose, Jessie R Chappel, Rebecca L Beres, Mark A Watson, Corey Webster, Jordan B Burton, Roland Bruderer, Pierre-Yves Desprez, Lukas Reiter, Judith Campisi, Erin S Baker, Birgit Schilling
Exosomes Released from Senescent Cells and Circulatory Exosomes Isolated from Human Plasma Reveal Aging-associated Proteomic and Lipid Signatures. bioRxiv : the preprint server for biology (2024)
Jordan B Burton, Anne Silva-Barbosa, Joanna Bons, Jacob Rose, Katherine E Pfister, Fabia Simona, Tejas Gandhi, Lukas Reiter, Oliver Bernhardt, Christie L Hunter, Eric S Goetzman, Sunder Sims-Lucas, Birgit Schilling
Substantial Downregulation of Mitochondrial and Peroxisomal Proteins during Acute Kidney Injury revealed by Data-Independent Acquisition Proteomics. bioRxiv : the preprint server for biology (2023)
Devon Kohler, Mateusz Staniak, Tsung-Heng Tsai, Ting Huang, Nicholas Shulman, Oliver M Bernhardt, Brendan X MacLean, Alexey I Nesvizhskii, Lukas Reiter, Eduard Sabido, Meena Choi, Olga Vitek
MSstats Version 4.0: Statistical Analyses of Quantitative Mass Spectrometry-Based Proteomic Experiments with Chromatography-Based Quantification at Scale. Journal of proteome research (2023)
Liliana Malinovska, Valentina Cappelletti, Devon Kohler, Ilaria Piazza, Tsung-Heng Tsai, Monika Pepelnjak, Patrick Stalder, Christian Dörig, Fabian Sesterhenn, Franziska Elsässer, Lucie Kralickova, Nigel Beaton, Lukas Reiter, Natalie de Souza, Olga Vitek, Paola Picotti
Author Correction: Proteome-wide structural changes measured with limited proteolysis-mass spectrometry: an advanced protocol for high-throughput applications. Nature protocols (2023)
Liliana Malinovska, Valentina Cappelletti, Devon Kohler, Ilaria Piazza, Tsung-Heng Tsai, Monika Pepelnjak, Patrick Stalder, Christian Dörig, Fabian Sesterhenn, Franziska Elsässer, Lucie Kralickova, Nigel Beaton, Lukas Reiter, Natalie de Souza, Olga Vitek, Paola Picotti
Author Correction: Proteome-wide structural changes measured with limited proteolysis-mass spectrometry: an advanced protocol for high-throughput applications. Nature protocols (2023)
Liliana Malinovska, Valentina Cappelletti, Devon Kohler, Ilaria Piazza, Tsung-Heng Tsai, Monika Pepelnjak, Patrick Stalder, Christian Dörig, Fabian Sesterhenn, Franziska Elsässer, Lucie Kralickova, Nigel Beaton, Lukas Reiter, Natalie de Souza, Olga Vitek, Paola Picotti
Proteome-wide structural changes measured with limited proteolysis-mass spectrometry: an advanced protocol for high-throughput applications. Nature protocols 18 (3) (2022)
Liliana Malinovska, Valentina Cappelletti, Devon Kohler, Ilaria Piazza, Tsung-Heng Tsai, Monika Pepelnjak, Patrick Stalder, Christian Dörig, Fabian Sesterhenn, Franziska Elsässer, Lucie Kralickova, Nigel Beaton, Lukas Reiter, Natalie de Souza, Olga Vitek, Paola Picotti
Proteome-wide structural changes measured with limited proteolysis-mass spectrometry: an advanced protocol for high-throughput applications. Nature protocols 18 (3) (2022)
Liliana Malinovska, Valentina Cappelletti, Devon Kohler, Ilaria Piazza, Tsung-Heng Tsai, Monika Pepelnjak, Patrick Stalder, Christian Dörig, Fabian Sesterhenn, Franziska Elsässer, Lucie Kralickova, Nigel Beaton, Lukas Reiter, Natalie de Souza, Olga Vitek, Paola Picotti
Proteome-wide structural changes measured with limited proteolysis-mass spectrometry: an advanced protocol for high-throughput applications. Nature protocols (2022)
Liliana Malinovska, Valentina Cappelletti, Devon Kohler, Ilaria Piazza, Tsung-Heng Tsai, Monika Pepelnjak, Patrick Stalder, Christian Dörig, Fabian Sesterhenn, Franziska Elsässer, Lucie Kralickova, Nigel Beaton, Lukas Reiter, Natalie de Souza, Olga Vitek, Paola Picotti
Proteome-wide structural changes measured with limited proteolysis-mass spectrometry: an advanced protocol for high-throughput applications. Nature protocols (2022)
Marco Tognetti, Kamil Sklodowski, Sebastian Müller, Dominique Kamber, Jan Muntel, Roland Bruderer, Lukas Reiter
Biomarker Candidates for Tumors Identified from Deep-Profiled Plasma Stem Predominantly from the Low Abundant Area. Journal of proteome research 21 (7) (2022)
Liliana Malinovska, Valentina Cappelletti, Devon Kohler, Ilaria Piazza, Tsung-Heng Tsai, Monika Pepelnjak, Patrick Stalder, Christian Dörig, Fabian Sesterhenn, Franziska Elsässer, Lucie Kralickova, Nigel Beaton, Lukas Reiter, Natalie de Souza, Olga Vitek, Paola Picotti
Proteome-wide structural changes measured with limited proteolysis-mass spectrometry: an advanced protocol for high-throughput applications. Nature protocols 18 (3) (2022)
Liliana Malinovska, Valentina Cappelletti, Devon Kohler, Ilaria Piazza, Tsung-Heng Tsai, Monika Pepelnjak, Patrick Stalder, Christian Dörig, Fabian Sesterhenn, Franziska Elsässer, Lucie Kralickova, Nigel Beaton, Lukas Reiter, Natalie de Souza, Olga Vitek, Paola Picotti
Proteome-wide structural changes measured with limited proteolysis-mass spectrometry: an advanced protocol for high-throughput applications. Nature protocols (2022)
Barbora Salovska, Hongwen Zhu, Tejas Gandhi, Max Frank, Wenxue Li, George A Rosenberger, Chongde Wu, Pierre-Luc Germain, Hu Zhou, Zdenek Hodny, Lukas Reiter, Yansheng Liu
Isoform-resolved correlation analysis between mRNA abundance regulation and protein level degradation. Molecular systems biology 16 (3) (2021)
J Adam Hendricks, Nigel Beaton, Alexey Chernobrovkin, Eric Miele, Ghaith M Hamza, Piero Ricchiuto, Ronald C Tomlinson, Tomas Friman, Cassandra Borenstain, Bernard Barlaam, Sudhir Hande, Michelle L Lamb, Chris De Savi, Rick Davies, Martin Main, Joakim Hellner, Kristina Beeler, Yuehan Feng, Roland Bruderer, Lukas Reiter, Daniel Martinez Molina, M Paola Castaldi
Mechanistic Insights into a CDK9 Inhibitor Via Orthogonal Proteomics Methods. ACS chemical biology 17 (1) (2021)
Ilaria Piazza, Nigel Beaton, Roland Bruderer, Thomas Knobloch, Crystel Barbisan, Lucie Chandat, Alexander Sudau, Isabella Siepe, Oliver Rinner, Natalie de Souza, Paola Picotti, Lukas Reiter
A machine learning-based chemoproteomic approach to identify drug targets and binding sites in complex proteomes. Nature communications 11 (1) (2020)
Meena Choi, Jeremy Carver, Cristina Chiva, Manuel Tzouros, Ting Huang, Tsung-Heng Tsai, Benjamin S Pullman, Oliver M Bernhardt, Ruth Hüttenhain, Guo Ci Teo, Yasset Perez Riverol, Jan Muntel, Maik Müller, Sandra Goetze, Maria Pavlou, Erik Verschueren, Bernd Wollscheid, Alexey I Nesvizhskii, Lukas Reiter, Tom Dunkley, Eduard Sabidó, Nuno Bandeira, Olga Vitek
MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets. Nature methods 17 (10) (2020)
Dorte B Bekker-Jensen, Oliver M Bernhardt, Alexander Hogrebe, Ana Martínez-Val, Lynn Verbeke, Tejas Gandhi, Christian D Kelstrup, Lukas Reiter, Jesper Velgaard Olsen
Rapid and site-specific deep phosphoproteome profiling by data-independent acquisition without the need for spectral libraries. Nature communications 11 (1) (2020)
Josue Baeza, Alexis J Lawton, Jing Fan, Michael J Smallegan, Ian Lienert, Tejas Gandhi, Oliver M Bernhardt, Lukas Reiter, John M Denu
Revealing Dynamic Protein Acetylation across Subcellular Compartments. Journal of proteome research 19 (6) (2020)
Jan Muntel, Joanna M Kirkpatrick, Roland Bruderer, Ting Huang, Olga Vitek, Alessandro Ori, Lukas Reiter
Comparison of Protein Quantification in a Complex Background by DIA and TMT Workflows with Fixed Instrument Time. Journal of proteome research 18 (3) (2019)
Jasjot Singh, Edgar Kaade, Jan Muntel, Roland Bruderer, Lukas Reiter, Melanie Thelen, Dominic Winter
Systematic Comparison of Strategies for the Enrichment of Lysosomes by Data Independent Acquisition. Journal of proteome research 19 (1) (2019)
Roland Bruderer, Jan Muntel, Sebastian Müller, Oliver M Bernhardt, Tejas Gandhi, Ornella Cominetti, Charlotte Macron, Jérôme Carayol, Oliver Rinner, Arne Astrup, Wim H M Saris, Jörg Hager, Armand Valsesia, Loïc Dayon, Lukas Reiter
Analysis of 1508 Plasma Samples by Capillary-Flow Data-Independent Acquisition Profiles Proteomics of Weight Loss and Maintenance. Molecular & cellular proteomics : MCP 18 (6) (2019)
Marc van Oostrum, Maik Müller, Fabian Klein, Roland Bruderer, Hui Zhang, Patrick G A Pedrioli, Lukas Reiter, Panagiotis Tsapogas, Antonius Rolink, Bernd Wollscheid
Classification of mouse B cell types using surfaceome proteotype maps. Nature communications 10 (1) (2019)