Mads Albertsen

Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 40

Top Venues

The ISME journal

Nature communications

Nature methods

Nature biotechnology

Aalborg Universitet

Aalborg University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Aalborg Universitet Sep 01 2014

Denmark

Post Doc. Experimental evolution of microbial communities :: Department of Chemistry and Bioscience

Education History

Aalborg University Jul 01 2011 - Aug 30 2014

Denmark

PHD :: Department of Chemistry and Bioscience

Aalborg Universitet Sep 01 2009 - Jul 01 2011

Denmark

MSC :: Department of Chemistry and Bioscience

Aalborg Universitet Sep 01 2006 - Jul 01 2009

Denmark

BSC :: Department of Chemistry and Bioscience

Publications

Shino Suzuki, Shun'ichi Ishii, Grayson L Chadwick, Yugo Tanaka, Atsushi Kouzuma, Kazuya Watanabe, Fumio Inagaki, Mads Albertsen, Per Halkjaer Nielsen, Kenneth H Nealson
A non-methanogenic archaeon within the order Methanocellales. Nature communications 15 (1) (2024)
Thomas Bygh Nymann Jensen, Sebastian Mølvang Dall, Simon Knutsson, Søren Michael Karst, Mads Albertsen
High-throughput DNA extraction and cost-effective miniaturized metagenome and amplicon library preparation of soil samples for DNA sequencing. PloS one 19 (4) (2024)
Sabrina Just Kousgaard, Frederik Cold, Sofie Ingdam Halkjær, Andreas Munk Petersen, Jens Kjeldsen, Jane Møller Hansen, Sebastian Mølvang Dall, Mads Albertsen, Hans Linde Nielsen, Karina Frahm Kirk, Kirsten Duch, Mads Sønderkær, Ole Thorlacius-Ussing
The effect of non-pooled multi-donor faecal microbiota transplantation for inducing clinical remission in patients with chronic pouchitis: Results from a multicentre randomised double-blinded placebo-controlled trial (MicroPouch). Journal of Crohn's & colitis (2024)
Mark P Khurana, Jacob Curran-Sebastian, Neil Scheidwasser, Christian Morgenstern, Morten Rasmussen, Jannik Fonager, Marc Stegger, Man-Hung Eric Tang, Jonas L Juul, Leandro Andrés Escobar-Herrera, Frederik Trier Møller, null null, Mads Albertsen, Moritz U G Kraemer, Louis du Plessis, Jokelainen Pikka, Sune Lehmann, Tyra G Krause, Henrik Ullum, David A Duchêne, Laust Hvas Mortensen, Samir Bhatt
High-resolution epidemiological landscape from ~290,000 SARS-CoV-2 genomes from Denmark. Nature communications 15 (1) (2024)
Shino Suzuki, Shun'ichi Ishii, Grayson L Chadwick, Yugo Tanaka, Atsushi Kouzuma, Kazuya Watanabe, Fumio Inagaki, Mads Albertsen, Per Halkjaer Nielsen, Kenneth H Nealson
A non-methanogenic archaeon within the order Methanocellales. Nature communications 15 (1) (2024)
Mark P Khurana, Jacob Curran-Sebastian, Neil Scheidwasser, Christian Morgenstern, Morten Rasmussen, Jannik Fonager, Marc Stegger, Man-Hung Eric Tang, Jonas L Juul, Leandro Andrés Escobar-Herrera, Frederik Trier Møller, null null, Mads Albertsen, Moritz U G Kraemer, Louis du Plessis, Jokelainen Pikka, Sune Lehmann, Tyra G Krause, Henrik Ullum, David A Duchêne, Laust Hvas Mortensen, Samir Bhatt
High-resolution epidemiological landscape from ~290,000 SARS-CoV-2 genomes from Denmark. Nature communications 15 (1) (2024)
Thomas Bygh Nymann Jensen, Sebastian Mølvang Dall, Simon Knutsson, Søren Michael Karst, Mads Albertsen
High-throughput DNA extraction and cost-effective miniaturized metagenome and amplicon library preparation of soil samples for DNA sequencing. PloS one 19 (4) (2024)
Thomas Bygh Nymann Jensen, Sebastian Mølvang Dall, Simon Knutsson, Søren Michael Karst, Mads Albertsen
High-throughput DNA extraction and cost-effective miniaturized metagenome and amplicon library preparation of soil samples for DNA sequencing. PloS one 19 (4) (2024)
Sabrina Just Kousgaard, Frederik Cold, Sofie Ingdam Halkjær, Andreas Munk Petersen, Jens Kjeldsen, Jane Møller Hansen, Sebastian Mølvang Dall, Mads Albertsen, Hans Linde Nielsen, Karina Frahm Kirk, Kirsten Duch, Mads Sønderkær, Ole Thorlacius-Ussing
The effect of non-pooled multi-donor faecal microbiota transplantation for inducing clinical remission in patients with chronic pouchitis: Results from a multicentre randomised double-blinded placebo-controlled trial (MicroPouch). Journal of Crohn's & colitis (2024)
Shino Suzuki, Shun'ichi Ishii, Grayson L Chadwick, Yugo Tanaka, Atsushi Kouzuma, Kazuya Watanabe, Fumio Inagaki, Mads Albertsen, Per Halkjaer Nielsen, Kenneth H Nealson
A non-methanogenic archaeon within the order Methanocellales. Nature communications 15 (1) (2024)
Mark P Khurana, Jacob Curran-Sebastian, Neil Scheidwasser, Christian Morgenstern, Morten Rasmussen, Jannik Fonager, Marc Stegger, Man-Hung Eric Tang, Jonas L Juul, Leandro Andrés Escobar-Herrera, Frederik Trier Møller, null null, Mads Albertsen, Moritz U G Kraemer, Louis du Plessis, Jokelainen Pikka, Sune Lehmann, Tyra G Krause, Henrik Ullum, David A Duchêne, Laust Hvas Mortensen, Samir Bhatt
High-resolution epidemiological landscape from ~290,000 SARS-CoV-2 genomes from Denmark. Nature communications 15 (1) (2024)
Mantas Sereika, Francesca Petriglieri, Thomas Bygh Nymann Jensen, Artur Sannikov, Morten Hoppe, Per Halkjaer Nielsen, Ian P G Marshall, Andreas Schramm, Mads Albertsen
Closed genomes uncover a saltwater species of Candidatus Electronema and shed new light on the boundary between marine and freshwater cable bacteria. The ISME journal 17 (4) (2023)
Mantas Sereika, Francesca Petriglieri, Thomas Bygh Nymann Jensen, Artur Sannikov, Morten Hoppe, Per Halkjaer Nielsen, Ian P G Marshall, Andreas Schramm, Mads Albertsen
Closed genomes uncover a saltwater species of Candidatus Electronema and shed new light on the boundary between marine and freshwater cable bacteria. The ISME journal 17 (4) (2023)
Florian U Moeller, Craig W Herbold, Arno Schintlmeister, Maria Mooshammer, Cherie Motti, Bettina Glasl, Katharina Kitzinger, Faris Behnam, Margarete Watzka, Thomas Schweder, Mads Albertsen, Andreas Richter, Nicole S Webster, Michael Wagner
Taurine as a key intermediate for host-symbiont interaction in the tropical sponge Ianthella basta. The ISME journal (2023)
Daniel McDonald, Yueyu Jiang, Metin Balaban, Kalen Cantrell, Qiyun Zhu, Antonio Gonzalez, James T Morton, Giorgia Nicolaou, Donovan H Parks, Søren M Karst, Mads Albertsen, Philip Hugenholtz, Todd DeSantis, Se Jin Song, Andrew Bartko, Aki Samuli Havulinna, Pekka Jousilahti, Susan Cheng, Michael Inouye, Teemu Niiranen, Mohit Jain, Veikko V Salomaa, Leo Lahti, Siavash Mirarab, Rob Knight
Author Correction: Greengenes2 unifies microbial data in a single reference tree. Nature biotechnology (2023)
Mads Albertsen
Long-read metagenomics paves the way toward a complete microbial tree of life. Nature methods 20 (1) (2023)
Daniel McDonald, Yueyu Jiang, Metin Balaban, Kalen Cantrell, Qiyun Zhu, Antonio Gonzalez, James T Morton, Giorgia Nicolaou, Donovan H Parks, Søren M Karst, Mads Albertsen, Philip Hugenholtz, Todd DeSantis, Se Jin Song, Andrew Bartko, Aki Samuli Havulinna, Pekka Jousilahti, Susan Cheng, Michael Inouye, Teemu Niiranen, Mohit Jain, Veikko V Salomaa, Leo Lahti, Siavash Mirarab, Rob Knight
Greengenes2 unifies microbial data in a single reference tree. Nature biotechnology (2023)
Mads Albertsen
Long-read metagenomics paves the way toward a complete microbial tree of life. Nature methods 20 (1) (2023)
Mantas Sereika, Francesca Petriglieri, Thomas Bygh Nymann Jensen, Artur Sannikov, Morten Hoppe, Per Halkjaer Nielsen, Ian P G Marshall, Andreas Schramm, Mads Albertsen
Closed genomes uncover a saltwater species of Candidatus Electronema and shed new light on the boundary between marine and freshwater cable bacteria. The ISME journal 17 (4) (2023)
Mantas Sereika, Francesca Petriglieri, Thomas Bygh Nymann Jensen, Artur Sannikov, Morten Hoppe, Per Halkjaer Nielsen, Ian P G Marshall, Andreas Schramm, Mads Albertsen
Closed genomes uncover a saltwater species of Candidatus Electronema and shed new light on the boundary between marine and freshwater cable bacteria. The ISME journal (2023)
Morten Simonsen Dueholm, Marta Nierychlo, Kasper Skytte Andersen, Vibeke Rudkjøbing, Simon Knutsson, null null, Mads Albertsen, Per Halkjaer Nielsen
MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants. Nature communications 13 (1) (2022)
Thomas Y Michaelsen, Marc Bennedbæk, Lasse E Christiansen, Mia S F Jørgensen, Camilla H Møller, Emil A Sørensen, Simon Knutsson, Jakob Brandt, Thomas B N Jensen, Clarisse Chiche-Lapierre, Emilio F Collados, Trine Sørensen, Celine Petersen, Vang Le-Quy, Mantas Sereika, Frederik T Hansen, Morten Rasmussen, Jannik Fonager, Søren M Karst, Rasmus L Marvig, Marc Stegger, Raphael N Sieber, Robert Skov, Rebecca Legarth, Tyra G Krause, Anders Fomsgaard, null null, Mads Albertsen
Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark. Genome medicine 14 (1) (2022)
Andre Lamurias, Mantas Sereika, Mads Albertsen, Katja Hose, Thomas Dyhre Nielsen
Metagenomic binning with assembly graph embeddings. Bioinformatics (Oxford, England) 38 (19) (2022)
Morten Simonsen Dueholm, Marta Nierychlo, Kasper Skytte Andersen, Vibeke Rudkjøbing, Simon Knutsson, null null, Mads Albertsen, Per Halkjaer Nielsen
Author Correction: MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants. Nature communications 13 (1) (2022)
Mantas Sereika, Rasmus Hansen Kirkegaard, Søren Michael Karst, Thomas Yssing Michaelsen, Emil Aarre Sørensen, Rasmus Dam Wollenberg, Mads Albertsen
Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing. Nature methods 19 (7) (2022)
Justin P Shaffer, Louis-Felix Nothias, Luke R Thompson, Jon G Sanders, Rodolfo A Salido, Sneha P Couvillion, Asker D Brejnrod, Franck Lejzerowicz, Niina Haiminen, Shi Huang, Holly L Lutz, Qiyun Zhu, Cameron Martino, James T Morton, Smruthi Karthikeyan, Mélissa Nothias-Esposito, Kai Dührkop, Sebastian Böcker, Hyun Woo Kim, Alexander A Aksenov, Wout Bittremieux, Jeremiah J Minich, Clarisse Marotz, MacKenzie M Bryant, Karenina Sanders, Tara Schwartz, Greg Humphrey, Yoshiki Vásquez-Baeza, Anupriya Tripathi, Laxmi Parida, Anna Paola Carrieri, Kristen L Beck, Promi Das, Antonio González, Daniel McDonald, Joshua Ladau, Søren M Karst, Mads Albertsen, Gail Ackermann, Jeff DeReus, Torsten Thomas, Daniel Petras, Ashley Shade, James Stegen, Se Jin Song, Thomas O Metz, Austin D Swafford, Pieter C Dorrestein, Janet K Jansson, Jack A Gilbert, Rob Knight, null null
Standardized multi-omics of Earth's microbiomes reveals microbial and metabolite diversity. Nature microbiology 7 (12) (2022)
Caitlin Margaret Singleton, Francesca Petriglieri, Jannie M Kristensen, Rasmus H Kirkegaard, Thomas Y Michaelsen, Martin H Andersen, Zivile Kondrotaite, Søren M Karst, Morten Simonsen Dueholm, Per Halkjaer Nielsen, Mads Albertsen
Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing. Nature communications 12 (1) (2021)
Søren Michael Karst, Ryan M Ziels, Rasmus Hansen Kirkegaard, Emil Aarre Sørensen, Daniel McDonald, Qiyun Zhu, Rob Knight, Mads Albertsen
High-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing. Nature methods 18 (2) (2021)
Burak Avcı, Jakob Brandt, Dikla Nachmias, Natalie Elia, Mads Albertsen, Thijs J G Ettema, Andreas Schramm, Kasper Urup Kjeldsen
Spatial separation of ribosomes and DNA in Asgard archaeal cells. The ISME journal (2021)
Frederik Plesner Lyngse, Kåre Mølbak, Robert Leo Skov, Lasse Engbo Christensen, Laust Hvas Mortensen, Mads Albertsen, Camilla Holten Møller, Tyra Grove Krause, Morten Rasmussen, Thomas Yssing Michaelsen, Marianne Voldstedlund, Jannik Fonager, Nina Steenhard, null null, Carsten Thure Kirkeby
Increased transmissibility of SARS-CoV-2 lineage B.1.1.7 by age and viral load. Nature communications 12 (1) (2021)
Sabrina Just Kousgaard, Thomas Yssing Michaelsen, Hans Linde Nielsen, Karina Frahm Kirk, Jakob Brandt, Mads Albertsen, Ole Thorlacius-Ussing
Clinical results and microbiota changes after faecal microbiota transplantation for chronic pouchitis: a pilot study. Scandinavian journal of gastroenterology 55 (4) (2020)
Liping Hao, Thomas Yssing Michaelsen, Caitlin Margaret Singleton, Giulia Dottorini, Rasmus Hansen Kirkegaard, Mads Albertsen, Per Halkjaer Nielsen, Morten Simonsen Dueholm
Novel syntrophic bacteria in full-scale anaerobic digesters revealed by genome-centric metatranscriptomics. The ISME journal 14 (4) (2020)
Anne Daebeler, Katharina Kitzinger, Hanna Koch, Craig W Herbold, Michaela Steinfeder, Jasmin Schwarz, Thomas Zechmeister, Søren M Karst, Mads Albertsen, Per Halkjaer Nielsen, Michael Wagner, Holger Daims
Exploring the upper pH limits of nitrite oxidation: diversity, ecophysiology, and adaptive traits of haloalkalitolerant Nitrospira. The ISME journal 14 (12) (2020)
Tess E Brewer, Mads Albertsen, Arwyn Edwards, Rasmus Hansen Kirkegaard, Eduardo P C Rocha, Noah Fierer
Unlinked rRNA genes are widespread among bacteria and archaea. The ISME journal 14 (2) (2019)
Bela Hausmann, Claus Pelikan, Craig W Herbold, Stephan Köstlbacher, Mads Albertsen, Stephanie A Eichorst, Tijana Glavina Del Rio, Martin Huemer, Per Halkjaer Nielsen, Thomas Rattei, Ulrich Stingl, Susannah G Tringe, Daniela Trojan, Cecilia Wentrup, Dagmar Woebken, Michael Pester, Alexander Loy
Peatland Acidobacteria with a dissimilatory sulfur metabolism. The ISME journal 12 (7) (2018)
Søren M Karst, Morten Simonsen Dueholm, Simon Jon McIlroy, Rasmus Hansen Kirkegaard, Per Halkjaer Nielsen, Mads Albertsen
Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias. Nature biotechnology 36 (2) (2018)
Liping Hao, Simon Jon McIlroy, Rasmus Hansen Kirkegaard, Søren Michael Karst, Warnakulasuriya Eustace Yrosh Fernando, Hüsnü Aslan, Rikke Louise Meyer, Mads Albertsen, Per Halkjaer Nielsen, Morten Simonsen Dueholm
Novel prosthecate bacteria from the candidate phylum Acetothermia. The ISME journal 12 (9) (2018)
Rasmus Hansen Kirkegaard, Simon Jon McIlroy, Jannie M Kristensen, Marta Nierychlo, Søren M Karst, Morten Simonsen Dueholm, Mads Albertsen, Per Halkjaer Nielsen
The impact of immigration on microbial community composition in full-scale anaerobic digesters. Scientific reports 7 (1) (2017)
Kirsten Oswald, Jon S Graf, Sten Littmann, Daniela Tienken, Andreas Brand, Bernhard Wehrli, Mads Albertsen, Holger Daims, Michael Wagner, Marcel Mm Kuypers, Carsten J Schubert, Jana Milucka
Crenothrix are major methane consumers in stratified lakes. The ISME journal 11 (9) (2017)
Lars Behrendt, Jean-Baptiste Raina, Adrian Lutz, Witold Kot, Mads Albertsen, Per Halkjær-Nielsen, Søren J Sørensen, Anthony Wd Larkum, Michael Kühl
In situ metabolomic- and transcriptomic-profiling of the host-associated cyanobacteria Prochloron and Acaryochloris marina. The ISME journal (2017)

Mads Albertsen.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Mads Albertsen