Nicholas E Navin (Nick Navin, Nicholas Navin)

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 24

Top Topics

Recombinant Human

Top Venues

Nature biotechnology

Nature reviews. Cancer

Research square

This page only lists publications with an associated author ORCID identifier.

Publications

Muhammad Aminu, Bo Zhu, Natalie Vokes, Hong Chen, Lingzhi Hong, Jianrong Li, Junya Fujimoto, Yuqui Yang, Tao Wang, Bo Wang, Alissa Poteete, Monique B Nilsson, Xiuning Le, Cascone Tina, David Jaffray, Nicholas E Navin, Lauren Averett Byers, Don L Gibbons, John Victor Heymach, Ken Chen, Chao Cheng, Jianjun Zhang, Jia Wu
CoCo-ST: Comparing and Contrasting Spatial Transcriptomics data sets using graph contrastive learning. Research square (2024)
Jia Wu, Muhammad Aminu, Bo Zhu, Natalie Vokes, Hong Chen, Lingzhi Hong, Jianrong Li, Junya Fujimoto, Alissa Poteete, Monique Nilsson, Xiuning Li, Tina Cascone, David Jaffray, Nicholas E Navin, Lauren Averett Byers, Don L Gibbons, John Victor Heymach, Ken Chen, Chao Cheng, Jianjun Zhang, Yuqui Yang, Tao Wang, Bo Wang
CoCo-ST: Comparing and Contrasting Spatial Transcriptomics data sets using graph contrastive learning. Research square (2024)
Tapsi Kumar, Kevin Nee, Runmin Wei, Siyuan He, Quy H Nguyen, Shanshan Bai, Kerrigan Blake, Maren Pein, Yanwen Gong, Emi Sei, Min Hu, Anna K Casasent, Aatish Thennavan, Jianzhuo Li, Tuan Tran, Ken Chen, Benedikt Nilges, Nachiket Kashikar, Oliver Braubach, Bassem Ben Cheikh, Nadya Nikulina, Hui Chen, Mediget Teshome, Brian A Menegaz, Huma Javaid, Chandandeep Nagi, Jessica Montalvan, Tatyana Lev, Sharmila Mallya, Delia F Tifrea, Robert Edwards, Erin Lin, Ritesh Parajuli, Summer E Hanson, Sebastian Winocour, Alastair Thompson, Bora Lim, Devon A Lawson, Kai Kessenbrock, Nicholas E Navin
A spatially resolved single-cell genomic atlas of the adult human breast. Nature (2023)
Jovanka Gencel-Augusto, Xiaoping Su, Yuan Qi, Elizabeth M Whitley, Vinod Pant, Shunbin Xiong, Vrutant V Shah, Jerome Lin, Encarnacion Perez, Marta L Fiorotto, Iqbal Mahmud, Abhinav K Jain, Philip L Lorenzi, Nicholas E Navin, Ellen R Richie, Guillermina Lozano
Dimeric p53 Mutant Elicits Unique Tumor-Suppressive Activities through an Altered Metabolic Program. Cancer discovery (2023)
Jinzhuang Dou, Yukun Tan, Kian Hong Kock, Jun Wang, Xuesen Cheng, Le Min Tan, Kyung Yeon Han, Chung-Chau Hon, Woong-Yang Park, Jay W Shin, Haijing Jin, Yujia Wang, Han Chen, Li Ding, Shyam Prabhakar, Nicholas E Navin, Rui Chen, Ken Chen
Single-nucleotide variant calling in single-cell sequencing data with Monopogen. Nature biotechnology (2023)
Pat Gulhati, Aislyn Schalck, Shan Jiang, Xiaoying Shang, Chang-Jiun Wu, Pingping Hou, Sharia Hernandez Ruiz, Luisa Maren Solis Soto, Edwin Roger Parra Cuentes, Haoqiang Ying, Jincheng Han, Prasenjit Dey, Jun Li, Pingna Deng, Emi Sei, Dean Y Maeda, John A Zebala, Denise J Spring, Michael Kim, Huamin Wang, Anirban Maitra, Dirk Moore, Karen Clise-Dwyer, Y Alan Wang, Nicholas E Navin, Ronald A DePinho
Targeting T cell checkpoints 41BB and LAG3 and myeloid cell CXCR1/CXCR2 results in antitumor immunity and durable response in pancreatic cancer. Nature cancer (2022)
Pat Gulhati, Aislyn Schalck, Shan Jiang, Xiaoying Shang, Chang-Jiun Wu, Pingping Hou, Sharia Hernandez Ruiz, Luisa Maren Solis Soto, Edwin Roger Parra Cuentes, Haoqiang Ying, Jincheng Han, Prasenjit Dey, Jun Li, Pingna Deng, Emi Sei, Dean Y Maeda, John A Zebala, Denise J Spring, Michael Kim, Huamin Wang, Anirban Maitra, Dirk Moore, Karen Clise-Dwyer, Y Alan Wang, Nicholas E Navin, Ronald A DePinho
Targeting T cell checkpoints 41BB and LAG3 and myeloid cell CXCR1/CXCR2 results in antitumor immunity and durable response in pancreatic cancer. Nature cancer (2022)
Anna K Casasent, Mathilde M M Almekinders, Charlotta Mulder, Proteeti Bhattacharjee, Deborah E Collyar, Alastair M Thompson, Jos Jonkers, Esther H Lips, Jacco van Rheenen, E Shelley Hwang, Serena Nik-Zainal, Nicholas E Navin, Jelle Wesseling, null null
Author Correction: Learning to distinguish progressive and non-progressive ductal carcinoma in situ. Nature reviews. Cancer (2022)
Anna K Casasent, Mathilde M M Almekinders, Charlotta Mulder, Proteeti Bhattacharjee, Deborah E Collyar, Alastair M Thompson, Jos Jonkers, Esther H Lips, Jacco van Rheenen, E Shelley Hwang, Serena Nik-Zainal, Nicholas E Navin, Jelle Wesseling, null null
Author Correction: Learning to distinguish progressive and non-progressive ductal carcinoma in situ. Nature reviews. Cancer (2022)
Pat Gulhati, Aislyn Schalck, Shan Jiang, Xiaoying Shang, Chang-Jiun Wu, Pingping Hou, Sharia Hernandez Ruiz, Luisa Maren Solis Soto, Edwin Roger Parra Cuentes, Haoqiang Ying, Jincheng Han, Prasenjit Dey, Jun Li, Pingna Deng, Emi Sei, Dean Y Maeda, John A Zebala, Denise J Spring, Michael Kim, Huamin Wang, Anirban Maitra, Dirk Moore, Karen Clise-Dwyer, Y Alan Wang, Nicholas E Navin, Ronald A DePinho
Targeting T cell checkpoints 41BB and LAG3 and myeloid cell CXCR1/CXCR2 results in antitumor immunity and durable response in pancreatic cancer. Nature cancer 4 (1) (2022)
Pat Gulhati, Aislyn Schalck, Shan Jiang, Xiaoying Shang, Chang-Jiun Wu, Pingping Hou, Sharia Hernandez Ruiz, Luisa Maren Solis Soto, Edwin Roger Parra Cuentes, Haoqiang Ying, Jincheng Han, Prasenjit Dey, Jun Li, Pingna Deng, Emi Sei, Dean Y Maeda, John A Zebala, Denise J Spring, Michael Kim, Huamin Wang, Anirban Maitra, Dirk Moore, Karen Clise-Dwyer, Y Alan Wang, Nicholas E Navin, Ronald A DePinho
Targeting T cell checkpoints 41BB and LAG3 and myeloid cell CXCR1/CXCR2 results in antitumor immunity and durable response in pancreatic cancer. Nature cancer 4 (1) (2022)
Anna K Casasent, Mathilde M M Almekinders, Charlotta Mulder, Proteeti Bhattacharjee, Deborah E Collyar, Alastair M Thompson, Jos Jonkers, Esther H Lips, Jacco van Rheenen, E Shelley Hwang, Serena Nik-Zainal, Nicholas E Navin, Jelle Wesseling, null null
Learning to distinguish progressive and non-progressive ductal carcinoma in situ. Nature reviews. Cancer 22 (12) (2022)
Pat Gulhati, Aislyn Schalck, Shan Jiang, Xiaoying Shang, Chang-Jiun Wu, Pingping Hou, Sharia Hernandez Ruiz, Luisa Maren Solis Soto, Edwin Roger Parra Cuentes, Haoqiang Ying, Jincheng Han, Prasenjit Dey, Jun Li, Pingna Deng, Emi Sei, Dean Y Maeda, John A Zebala, Denise J Spring, Michael Kim, Huamin Wang, Anirban Maitra, Dirk Moore, Karen Clise-Dwyer, Y Alan Wang, Nicholas E Navin, Ronald A DePinho
Targeting T cell checkpoints 41BB and LAG3 and myeloid cell CXCR1/CXCR2 results in antitumor immunity and durable response in pancreatic cancer. Nature cancer 4 (1) (2022)
Runmin Wei, Siyuan He, Shanshan Bai, Emi Sei, Min Hu, Alastair Thompson, Ken Chen, Savitri Krishnamurthy, Nicholas E Navin
Spatial charting of single-cell transcriptomes in tissues. Nature biotechnology 40 (8) (2022)
Aislyn Schalck, Donastas Sakellariou-Thompson, Marie-Andrée Forget, Emi Sei, Tara G Hughes, Alexandre Reuben, Shanshan Bai, Min Hu, Tapsi Kumar, Mark W Hurd, Matthew H G Katz, Ching-Wei D Tzeng, Shubham Pant, Milind M Javle, David R Fogelman, Anirban Maitra, Cara L Haymaker, Michael P Kim, Nicholas E Navin, Chantale Bernatchez
Single-Cell Sequencing Reveals Trajectory of Tumor-Infiltrating Lymphocyte States in Pancreatic Cancer. Cancer discovery 12 (10) (2022)
Esther H Lips, Tapsi Kumar, Anargyros Megalios, Lindy L Visser, Michael Sheinman, Angelo Fortunato, Vandna Shah, Marlous Hoogstraat, Emi Sei, Diego Mallo, Maria Roman-Escorza, Ahmed Abdullah Ahmed, Mingchu Xu, Alexandra W van den Belt-Dusebout, Wim Brugman, Anna K Casasent, Karen Clements, Helen R Davies, Liping Fu, Anita Grigoriadis, Timothy M Hardman, Lorraine M King, Marielle Krete, Petra Kristel, Michiel de Maaker, Carlo C Maley, Jeffrey R Marks, Brian A Menegaz, Lennart Mulder, Frank Nieboer, Salpie Nowinski, Sarah E Pinder, Jelmar Quist, Carolina Salinas-Souza, Michael Schaapveld, Marjanka K Schmidt, Abeer M Shaaban, Rana Shami, Mathini Sridharan, John Zhang, Hilary Stobart, Deborah E Collyar, Serena Nik-Zainal, Lodewyk F A Wessels, E Shelley Hwang, Nicholas E Navin, P Andrew Futreal, null null, Alastair M Thompson, Jelle Wesseling, Elinor J Sawyer
Genomic analysis defines clonal relationships of ductal carcinoma in situ and recurrent invasive breast cancer. Nature genetics 54 (6) (2022)
Pat Gulhati, Aislyn Schalck, Shan Jiang, Xiaoying Shang, Chang-Jiun Wu, Pingping Hou, Sharia Hernandez Ruiz, Luisa Maren Solis Soto, Edwin Roger Parra Cuentes, Haoqiang Ying, Jincheng Han, Prasenjit Dey, Jun Li, Pingna Deng, Emi Sei, Dean Y Maeda, John A Zebala, Denise J Spring, Michael Kim, Huamin Wang, Anirban Maitra, Dirk Moore, Karen Clise-Dwyer, Y Alan Wang, Nicholas E Navin, Ronald A DePinho
Targeting T cell checkpoints 41BB and LAG3 and myeloid cell CXCR1/CXCR2 results in antitumor immunity and durable response in pancreatic cancer. Nature cancer 4 (1) (2022)
Pat Gulhati, Aislyn Schalck, Shan Jiang, Xiaoying Shang, Chang-Jiun Wu, Pingping Hou, Sharia Hernandez Ruiz, Luisa Maren Solis Soto, Edwin Roger Parra Cuentes, Haoqiang Ying, Jincheng Han, Prasenjit Dey, Jun Li, Pingna Deng, Emi Sei, Dean Y Maeda, John A Zebala, Denise J Spring, Michael Kim, Huamin Wang, Anirban Maitra, Dirk Moore, Karen Clise-Dwyer, Y Alan Wang, Nicholas E Navin, Ronald A DePinho
Targeting T cell checkpoints 41BB and LAG3 and myeloid cell CXCR1/CXCR2 results in antitumor immunity and durable response in pancreatic cancer. Nature cancer (2022)
Pat Gulhati, Aislyn Schalck, Shan Jiang, Xiaoying Shang, Chang-Jiun Wu, Pingping Hou, Sharia Hernandez Ruiz, Luisa Maren Solis Soto, Edwin Roger Parra Cuentes, Haoqiang Ying, Jincheng Han, Prasenjit Dey, Jun Li, Pingna Deng, Emi Sei, Dean Y Maeda, John A Zebala, Denise J Spring, Michael Kim, Huamin Wang, Anirban Maitra, Dirk Moore, Karen Clise-Dwyer, Y Alan Wang, Nicholas E Navin, Ronald A DePinho
Targeting T cell checkpoints 41BB and LAG3 and myeloid cell CXCR1/CXCR2 results in antitumor immunity and durable response in pancreatic cancer. Nature cancer 4 (1) (2022)
Tom L Kaufmann, Marina Petkovic, Thomas B K Watkins, Emma C Colliver, Sofya Laskina, Nisha Thapa, Darlan C Minussi, Nicholas E Navin, Charles Swanton, Peter Van Loo, Kerstin Haase, Maxime Tarabichi, Roland F Schwarz
MEDICC2: whole-genome doubling aware copy-number phylogenies for cancer evolution. Genome biology 23 (1) (2022)
Ruli Gao, Shanshan Bai, Ying C Henderson, Yiyun Lin, Aislyn Schalck, Yun Yan, Tapsi Kumar, Min Hu, Emi Sei, Alexander Davis, Fang Wang, Simona F Shaitelman, Jennifer Rui Wang, Ken Chen, Stacy Moulder, Stephen Y Lai, Nicholas E Navin
Delineating copy number and clonal substructure in human tumors from single-cell transcriptomes. Nature biotechnology 39 (5) (2021)
Darlan C Minussi, Michael D Nicholson, Hanghui Ye, Alexander Davis, Kaile Wang, Toby M Baker, Maxime Tarabichi, Emi Sei, Haowei Du, Mashiat Rabbani, Cheng Peng, Min Hu, Shanshan Bai, Yu-Wei Lin, Aislyn Schalck, Asha Multani, Jin Ma, Thomas O McDonald, Anna Casasent, Angelica Barrera, Hui Chen, Bora Lim, Banu Arun, Funda Meric-Bernstam, Peter Van Loo, Franziska Michor, Nicholas E Navin
Breast tumours maintain a reservoir of subclonal diversity during expansion. Nature 592 (7853) (2021)
Kevin C Johnson, Kevin J Anderson, Elise T Courtois, Amit D Gujar, Floris P Barthel, Frederick S Varn, Diane Luo, Martine Seignon, Eunhee Yi, Hoon Kim, Marcos R H Estecio, Dacheng Zhao, Ming Tang, Nicholas E Navin, Rahul Maurya, Chew Yee Ngan, Niels Verburg, Philip C de Witt Hamer, Ketan Bulsara, Michael L Samuels, Sunit Das, Paul Robson, Roel G W Verhaak
Single-cell multimodal glioma analyses identify epigenetic regulators of cellular plasticity and environmental stress response. Nature genetics 53 (10) (2021)
Naveen Ramesh, Emi Sei, Pei Ching Tsai, Shanshan Bai, Yuehui Zhao, Patricia Troncoso, Paul G Corn, Christopher Logothetis, Amado J Zurita, Nicholas E Navin
Decoding the evolutionary response to prostate cancer therapy by plasma genome sequencing. Genome biology 21 (1) (2020)