Sean D Gallaher

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 18

Top Topics

Iron Deficiency

Genome Wide Association

Gene Expression

Top Venues

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Tim L Jeffers, Samuel Owen Purvine, Carrie D Nicora, Ryan McCombs, Shivani Upadhyaya, Adrien Stroumza, Ken Whang, Sean D Gallaher, Alice C Dohnalkova, Sabeeha S Merchant, Mary S Lipton, Krishna K Niyogi, Melissa S Roth
Iron rescues glucose-mediated photosynthesis repression during lipid accumulation in the green alga Chromochloris zofingiensis. Nature communications 15 (1) (2024)
Marco A Duenas, Rory J Craig, Sean D Gallaher, Jeffrey L Moseley, Sabeeha S Merchant
Leaky ribosomal scanning enables tunable translation of bicistronic ORFs in green algae. bioRxiv : the preprint server for biology (2024)
Marco A Duenas, Rory J Craig, Sean D Gallaher, Jeffrey L Moseley, Sabeeha S Merchant
Leaky ribosomal scanning enables tunable translation of bicistronic ORFs in green algae. bioRxiv : the preprint server for biology (2024)
Tim L Jeffers, Samuel Owen Purvine, Carrie D Nicora, Ryan McCombs, Shivani Upadhyaya, Adrien Stroumza, Ken Whang, Sean D Gallaher, Alice C Dohnalkova, Sabeeha S Merchant, Mary S Lipton, Krishna K Niyogi, Melissa S Roth
Iron rescues glucose-mediated photosynthesis repression during lipid accumulation in the green alga Chromochloris zofingiensis. Nature communications 15 (1) (2024)
Xiaoqing Sun, Matthew LaVoie, Paul A Lefebvre, Sean D Gallaher, Anne G Glaesener, Daniela Strenkert, Radhika Mehta, Sabeeha S Merchant, Carolyn D Silflow
Mutation of negative regulatory gene CEHC1 encoding an FBXO3 protein results in normoxic expression of HYDA genes in Chlamydomonas reinhardtii . bioRxiv : the preprint server for biology (2024)
Tim L Jeffers, Samuel Owen Purvine, Carrie D Nicora, Ryan McCombs, Shivani Upadhyaya, Adrien Stroumza, Ken Whang, Sean D Gallaher, Alice C Dohnalkova, Sabeeha S Merchant, Mary S Lipton, Krishna K Niyogi, Melissa S Roth
Iron rescues glucose-mediated photosynthesis repression during lipid accumulation in the green alga Chromochloris zofingiensis. Nature communications 15 (1) (2024)
Avinash Sreedasyam, Christopher Plott, Md Shakhawat Hossain, John T Lovell, Jerry W Jenkins, Jerry W Jenkins, Christopher Daum, Kerrie Barry, Joseph Carlson, Shengqiang Shu, Jeremy Phillips, Mojgan Amirebrahimi, Matthew Zane, Mei Wang, David Goodstein, Fabian B Haas, Manuel Hiss, Pierre-François Perroud, Sara S Jawdy, Yongil Yang, Rongbin Hu, Jenifer Johnson, Janette Kropat, Sean D Gallaher, Anna Lipzen, Eugene V Shakirov, Xiaoyu Weng, Ivone Torres-Jerez, Brock Weers, Daniel Conde, Marilia R Pappas, Lifeng Liu, Andrew Muchlinski, Hui Jiang, Christine Shyu, Pu Huang, Jose Sebastian, Carol Laiben, Alyssa Medlin, Sankalpi Carey, Alyssa A Carrell, Jin-Gui Chen, Mariano Perales, Kankshita Swaminathan, Isabel Allona, Dario Grattapaglia, Elizabeth A Cooper, Dorothea Tholl, John P Vogel, David J Weston, Xiaohan Yang, Thomas P Brutnell, Elizabeth A Kellogg, Ivan R Baxter, Michael Udvardi, Yuhong Tang, Todd C Mockler, Thomas E Juenger, John E Mullet, Stefan Andreas Rensing, Gerald A Tuskan, Sabeeha S Merchant, Gary Stacey, Jeremy Schmutz
JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom. Nucleic acids research (2023)
Lital Davidi, Sean D Gallaher, Eyal Ben-David, Samuel Owen Purvine, Thomas L Fillmore, Carrie D Nicora, Rory J Craig, Stefan Schmollinger, Sanja Roje, Crysten E Blaby-Haas, Robert P Auber, Jennifer H Wisecaver, Sabeeha S Merchant
Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management. Proceedings of the National Academy of Sciences of the United States of America 120 (30) (2023)
Rory J Craig, Sean D Gallaher, Shengqiang Shu, Patrice A Salomé, Jerry W Jenkins, Crysten E Blaby-Haas, Samuel Owen Purvine, Samuel O'Donnell, Kerrie W Barry, Jerry W Jenkins, Daniela Strenkert, Janette Kropat, Christopher Daum, Yuko Yoshinaga, David M Goodstein, Olivier Vallon, Jeremy Schmutz, Sabeeha S Merchant
The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type plus and minus strains reveal extensive structural mutation in the laboratory. The Plant cell 35 (2) (2023)
Juliane Neupert, Sean D Gallaher, Yinghong Lu, Daniela Strenkert, Na'ama Segal, Rouhollah Barahimipour, Sorel T Fitz-Gibbon, Michael Schroda, Sabeeha S Merchant, Ralph Bock
Publisher Correction: An epigenetic gene silencing pathway selectively acting on transgenic DNA in the green alga Chlamydomonasis. Nature communications 12 (1) (2021)
Sean D Gallaher, Rory J Craig, Iniyan Ganesan, Samuel Owen Purvine, Sean R McCorkle, Jerry W Jenkins, Daniela Strenkert, Lital Davidi, Melissa S Roth, Tim L Jeffers, Mary S Lipton, Krishna K Niyogi, Jeremy Schmutz, Steven M Theg, Crysten E Blaby-Haas, Sabeeha S Merchant
Widespread polycistronic gene expression in green algae. Proceedings of the National Academy of Sciences of the United States of America 118 (7) (2021)
Juliane Neupert, Sean D Gallaher, Yinghong Lu, Daniela Strenkert, Na'ama Segal, Rouhollah Barahimipour, Sorel T Fitz-Gibbon, Michael Schroda, Sabeeha S Merchant, Ralph Bock
An epigenetic gene silencing pathway selectively acting on transgenic DNA in the green alga Chlamydomonas. Nature communications 11 (1) (2020)
Melissa S Roth, Sean D Gallaher, Daniel J Westcott, Masakazu Iwai, Katherine B Louie, Maria Mueller, Andreas Walter, Fatima Foflonker, Benjamin P Bowen, Nassim N Ataii, Junha Song, Jian-Hua Chen, Crysten E Blaby-Haas, Carolyn A Larabell, Manfred Auer, Trent R Northen, Sabeeha S Merchant, Krishna K Niyogi
Regulation of Oxygenic Photosynthesis during Trophic Transitions in the Green Alga Chromochloris zofingiensis. The Plant cell 31 (3) (2019)
Daniela Strenkert, Stefan Schmollinger, Sean D Gallaher, Patrice A Salomé, Samuel Owen Purvine, Carrie D Nicora, Tabea Mettler-Altmann, Eric Soubeyrand, Andreas P M Weber, Mary S Lipton, Gilles J Basset, Sabeeha S Merchant
Multiomics resolution of molecular events during a day in the life of Chlamydomonas. Proceedings of the National Academy of Sciences of the United States of America 116 (6) (2019)
Sean D Gallaher, Sorel T Fitz-Gibbon, Daniela Strenkert, Samuel Owen Purvine, Matteo Pellegrini, Sabeeha S Merchant
High-throughput sequencing of the chloroplast and mitochondrion of Chlamydomonas reinhardtii to generate improved de novo assemblies, analyze expression patterns and transcript speciation, and evaluate diversity among laboratory strains and wild isolates. The Plant journal : for cell and molecular biology 93 (3) (2018)
Tyler M Wittkopp, Stefan Schmollinger, Shai I Saroussi, Wei Hu, Weiqing Zhang, Qiuling Fan, Sean D Gallaher, Michael T Leonard, Eric Soubeyrand, Gilles J Basset, Sabeeha S Merchant, Arthur R Grossman, Deqiang Duanmu, John Clark Lagarias
Bilin-Dependent Photoacclimation in Chlamydomonas reinhardtii. The Plant cell 29 (11) (2017)
Sean D Gallaher, Sorel T Fitz-Gibbon, Anne G Glaesener, Matteo Pellegrini, Sabeeha S Merchant
Chlamydomonas Genome Resource for Laboratory Strains Reveals a Mosaic of Sequence Variation, Identifies True Strain Histories, and Enables Strain-Specific Studies. The Plant cell 27 (9) (2015)
David Lopez, Takashi Hamaji, Janette Kropat, Peter DeHoff, Marco Morselli, Liudmilla Rubbi, Sorel T Fitz-Gibbon, Sean D Gallaher, Sabeeha S Merchant, James G Umen, Matteo Pellegrini
Dynamic Changes in the Transcriptome and Methylome of Chlamydomonas reinhardtii throughout Its Life Cycle. Plant physiology 169 (4) (2015)