Avinash Sreedasyam (A Sreedasyam)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 36

Top Topics

Gene Expression

Arabidopsis Thaliana

Top Venues

Nature communications

The Plant journal : for cell and molecular biology

This page only lists publications with an associated author ORCID identifier.

Publications

Avinash Sreedasyam, John T Lovell, Sujan Mamidi, Sameer Khanal, Jerry W Jenkins, Christopher Plott, Kempton B Bryan, Zhigang Li, Shengqiang Shu, Joseph Carlson, David M Goodstein, Luis De Santiago, Ryan C Kirkbride, Sebastian Calleja, Todd Campbell, Jenny C Koebernick, Jane K Dever, Jodi A Scheffler, Duke Pauli, Johnie N Jenkins, Jack C McCarty, Melissa Williams, LoriBeth Boston, Jenell Webber, Joshua A Udall, Z Jeffrey Chen, Fred Bourland, Warwick N Stiller, Christopher A Saski, Jerry W Jenkins, Peng W Chee, Don C Jones, Jeremy Schmutz
Genome resources for three modern cotton lines guide future breeding efforts. Nature plants (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Avinash Sreedasyam, John T Lovell, Sujan Mamidi, Sameer Khanal, Jerry W Jenkins, Christopher Plott, Kempton B Bryan, Zhigang Li, Shengqiang Shu, Joseph Carlson, David M Goodstein, Luis De Santiago, Ryan C Kirkbride, Sebastian Calleja, Todd Campbell, Jenny C Koebernick, Jane K Dever, Jodi A Scheffler, Duke Pauli, Johnie N Jenkins, Jack C McCarty, Melissa Williams, LoriBeth Boston, Jenell Webber, Joshua A Udall, Z Jeffrey Chen, Fred Bourland, Warwick N Stiller, Christopher A Saski, Jerry W Jenkins, Peng W Chee, Don C Jones, Jeremy Schmutz
Genome resources for three modern cotton lines guide future breeding efforts. Nature plants 10 (6) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Paul P Grabowski, Phat Dang, Jerry W Jenkins, Avinash Sreedasyam, Jenell Webber, Marshall Lamb, Qiong Zhang, Alvaro Sanz-Saez, Yucheng Feng, Victoria Bunting, Jayson Talag, Josh P Clevenger, Peggy Ozias-Akins, C Corley Holbrook, Ye Chu, Jerry W Jenkins, Jeremy Schmutz, Charles Chen, John T Lovell
Relics of interspecific hybridization retained in the genome of a drought-adapted peanut cultivar. G3 (Bethesda, Md.) (2024)
Avinash Sreedasyam, John T Lovell, Sujan Mamidi, Sameer Khanal, Jerry W Jenkins, Christopher Plott, Kempton B Bryan, Zhigang Li, Shengqiang Shu, Joseph Carlson, David M Goodstein, Luis De Santiago, Ryan C Kirkbride, Sebastian Calleja, Todd Campbell, Jenny C Koebernick, Jane K Dever, Jodi A Scheffler, Duke Pauli, Johnie N Jenkins, Jack C McCarty, Melissa Williams, LoriBeth Boston, Jenell Webber, Joshua A Udall, Z Jeffrey Chen, Fred Bourland, Warwick N Stiller, Christopher A Saski, Jerry W Jenkins, Peng W Chee, Don C Jones, Jeremy Schmutz
Genome resources for three modern cotton lines guide future breeding efforts. Nature plants 10 (6) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Mary Jane C Espina, John T Lovell, Jerry Jenkins, Shengqiang Shu, Avinash Sreedasyam, Brandon D Jordan, Jenell Webber, LoriBeth Boston, Tomáš Brůna, Jayson Talag, David Goodstein, Jane Grimwood, Gary Stacey, Steven B Cannon, Aaron J Lorenz, Jeremy Schmutz, Robert M Stupar
Assembly, comparative analysis, and utilization of a single haplotype reference genome for soybean. The Plant journal : for cell and molecular biology (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature (2024)
Avinash Sreedasyam, John T Lovell, Sujan Mamidi, Sameer Khanal, Jerry W Jenkins, Christopher Plott, Kempton B Bryan, Zhigang Li, Shengqiang Shu, Joseph Carlson, David M Goodstein, Luis De Santiago, Ryan C Kirkbride, Sebastian Calleja, Todd Campbell, Jenny C Koebernick, Jane K Dever, Jodi A Scheffler, Duke Pauli, Johnie N Jenkins, Jack C McCarty, Melissa Williams, LoriBeth Boston, Jenell Webber, Joshua A Udall, Z Jeffrey Chen, Fred Bourland, Warwick N Stiller, Christopher A Saski, Jerry W Jenkins, Peng W Chee, Don C Jones, Jeremy Schmutz
Genome resources for three modern cotton lines guide future breeding efforts. Nature plants 10 (6) (2024)
Adam L Healey, O Garsmeur, John T Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W Jenkins, Christopher Plott, Nathalie Piperidis, N Pompidor, Victor Llaca, Cushla J Metcalfe, Jaroslav Dolezel, P Cápal, J W Carlson, Jean-Yves Hoarau, C Hervouet, C Zini, Anne Diévart, A Lipzen, M Williams, L B Boston, J Webber, K Keymanesh, S Tejomurthula, S Rajasekar, Radosław Suchecki, Agnelo Furtado, G May, P Parakkal, Blake A Simmons, Kerrie W Barry, Robert James Henry, Jerry W Jenkins, Karen S Aitken, Jeremy Schmutz, Angélique D'Hont
The complex polyploid genome architecture of sugarcane. Nature 628 (8009) (2024)
Avinash Sreedasyam, John T Lovell, Sujan Mamidi, Sameer Khanal, Jerry W Jenkins, Christopher Plott, Kempton B Bryan, Zhigang Li, Shengqiang Shu, Joseph Carlson, David M Goodstein, Luis De Santiago, Ryan C Kirkbride, Sebastian Calleja, Todd Campbell, Jenny C Koebernick, Jane K Dever, Jodi A Scheffler, Duke Pauli, Johnie N Jenkins, Jack C McCarty, Melissa Williams, LoriBeth Boston, Jenell Webber, Joshua A Udall, Z Jeffrey Chen, Fred Bourland, Warwick N Stiller, Christopher A Saski, Jerry W Jenkins, Peng W Chee, Don C Jones, Jeremy Schmutz
Genome resources for three modern cotton lines guide future breeding efforts. Nature plants 10 (6) (2024)
Avinash Sreedasyam, Christopher Plott, Md Shakhawat Hossain, John T Lovell, Jerry W Jenkins, Jerry W Jenkins, Christopher Daum, Kerrie Barry, Joseph Carlson, Shengqiang Shu, Jeremy Phillips, Mojgan Amirebrahimi, Matthew Zane, Mei Wang, David Goodstein, Fabian B Haas, Manuel Hiss, Pierre-François Perroud, Sara S Jawdy, Yongil Yang, Rongbin Hu, Jenifer Johnson, Janette Kropat, Sean D Gallaher, Anna Lipzen, Eugene V Shakirov, Xiaoyu Weng, Ivone Torres-Jerez, Brock Weers, Daniel Conde, Marilia R Pappas, Lifeng Liu, Andrew Muchlinski, Hui Jiang, Christine Shyu, Pu Huang, Jose Sebastian, Carol Laiben, Alyssa Medlin, Sankalpi Carey, Alyssa A Carrell, Jin-Gui Chen, Mariano Perales, Kankshita Swaminathan, Isabel Allona, Dario Grattapaglia, Elizabeth A Cooper, Dorothea Tholl, John P Vogel, David J Weston, Xiaohan Yang, Thomas P Brutnell, Elizabeth A Kellogg, Ivan R Baxter, Michael Udvardi, Yuhong Tang, Todd C Mockler, Thomas E Juenger, John E Mullet, Stefan Andreas Rensing, Gerald A Tuskan, Sabeeha S Merchant, Gary Stacey, Jeremy Schmutz
JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom. Nucleic acids research (2023)
Adam L Healey, Bryan T Piatkowski, John T Lovell, Avinash Sreedasyam, Sarah B Carey, Sujan Mamidi, Shengqiang Shu, Christopher Plott, Jerry W Jenkins, Travis Lawrence, Blanka Aguero, Alyssa A Carrell, Marta Nieto-Lugilde, Jayson Talag, Aaron Duffy, Sara Jawdy, Kelsey R Carter, Lori-Beth Boston, Teresa Jones, Juan Jaramillo-Chico, Alex Harkess, Kerrie Barry, Keykhosrow Keymanesh, Diane Bauer, Jerry W Jenkins, Lee Gunter, Jeremy Schmutz, David J Weston, A Jonathan Shaw
Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics. Nature plants (2023)
Adam L Healey, Bryan T Piatkowski, John T Lovell, Avinash Sreedasyam, Sarah B Carey, Sujan Mamidi, Shengqiang Shu, Christopher Plott, Jerry W Jenkins, Travis Lawrence, Blanka Aguero, Alyssa A Carrell, Marta Nieto-Lugilde, Jayson Talag, Aaron Duffy, Sara Jawdy, Kelsey R Carter, Lori-Beth Boston, Teresa Jones, Juan Jaramillo-Chico, Alex Harkess, Kerrie Barry, Keykhosrow Keymanesh, Diane Bauer, Jerry W Jenkins, Lee Gunter, Jeremy Schmutz, David J Weston, A Jonathan Shaw
Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics. Nature plants 9 (2) (2023)
Adam L Healey, Bryan T Piatkowski, John T Lovell, Avinash Sreedasyam, Sarah B Carey, Sujan Mamidi, Shengqiang Shu, Christopher Plott, Jerry W Jenkins, Travis Lawrence, Blanka Aguero, Alyssa A Carrell, Marta Nieto-Lugilde, Jayson Talag, Aaron Duffy, Sara Jawdy, Kelsey R Carter, Lori-Beth Boston, Teresa Jones, Juan Jaramillo-Chico, Alex Harkess, Kerrie Barry, Keykhosrow Keymanesh, Diane Bauer, Jerry W Jenkins, Lee Gunter, Jeremy Schmutz, David J Weston, A Jonathan Shaw
Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics. Nature plants 9 (2) (2023)
Adam L Healey, Bryan T Piatkowski, John T Lovell, Avinash Sreedasyam, Sarah B Carey, Sujan Mamidi, Shengqiang Shu, Christopher Plott, Jerry W Jenkins, Travis Lawrence, Blanka Aguero, Alyssa A Carrell, Marta Nieto-Lugilde, Jayson Talag, Aaron Duffy, Sara Jawdy, Kelsey R Carter, Lori-Beth Boston, Teresa Jones, Juan Jaramillo-Chico, Alex Harkess, Kerrie Barry, Keykhosrow Keymanesh, Diane Bauer, Jerry W Jenkins, Lee Gunter, Jeremy Schmutz, David J Weston, A Jonathan Shaw
Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics. Nature plants 9 (2) (2023)
Li Lei, Sean P Gordon, Lifeng Liu, Nir Sade, John T Lovell, Maria Del Mar Rubio Wilhelmi, Vasanth Singan, Avinash Sreedasyam, Rachel Hestrin, Jeremy Phillips, Bryan T Hernandez, Kerrie Barry, Shengqiang Shu, Jerry W Jenkins, Jeremy Schmutz, David M Goodstein, Roger Thilmony, Eduardo Blumwald, John P Vogel
The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum. G3 (Bethesda, Md.) (2023)
Adam L Healey, Bryan T Piatkowski, John T Lovell, Avinash Sreedasyam, Sarah B Carey, Sujan Mamidi, Shengqiang Shu, Christopher Plott, Jerry W Jenkins, Travis Lawrence, Blanka Aguero, Alyssa A Carrell, Marta Nieto-Lugilde, Jayson Talag, Aaron Duffy, Sara Jawdy, Kelsey R Carter, Lori-Beth Boston, Teresa Jones, Juan Jaramillo-Chico, Alex Harkess, Kerrie Barry, Keykhosrow Keymanesh, Diane Bauer, Jerry W Jenkins, Lee Gunter, Jeremy Schmutz, David J Weston, A Jonathan Shaw
Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics. Nature plants 9 (2) (2023)
Xiaoyu Weng, Haili Song, Avinash Sreedasyam, Taslima Haque, Li Zhang, Cindy Chen, Yuko Yoshinaga, Melissa Williams, Ronan C O'Malley, Jerry W Jenkins, Jeremy Schmutz, Thomas E Juenger
Transcriptome and DNA methylome divergence of inflorescence development between two ecotypes in Panicum hallii. Plant physiology (2023)
Katrien M Devos, Peng Qi, Bochra A Bahri, Davis M Gimode, Katharine Jenike, Samuel J Manthi, Dagnachew Lule, Thomas Lux, Liliam Martinez-Bello, Thomas H Pendergast Iv, Christopher Plott, Dipnarayan Saha, Gurjot S Sidhu, Avinash Sreedasyam, Xuewen Wang, Hao Wang, Hallie Wright, Jianxin Zhao, Santosh Deshpande, Santie de Villiers, Mathews M Dida, Jerry W Jenkins, Jerry W Jenkins, John T Lovell, Klaus F X Mayer, Emmarold E Mneney, Henry F Ojulong, Michael C Schatz, Jeremy Schmutz, Bo Song, Kassahun Tesfaye, Damaris Achieng Odeny
Genome analyses reveal population structure and a purple stigma color gene candidate in finger millet. Nature communications 14 (1) (2023)
John T Lovell, Avinash Sreedasyam, Michael Eric Schranz, Melissa A Wilson, Joseph W Carlson, Alex E Harkess, David Mark Emms, David M Goodstein, Jeremy Schmutz
GENESPACE tracks regions of interest and gene copy number variation across multiple genomes. eLife 11 (2022)
John T Lovell, Alice H MacQueen, Sujan Mamidi, Jason Bonnette, Jerry W Jenkins, Joseph D Napier, Avinash Sreedasyam, Adam Healey, Adam Session, Shengqiang Shu, Kerrie Barry, Stacy Bonos, LoriBeth Boston, Christopher Daum, Shweta Deshpande, Aren Ewing, Paul P Grabowski, Taslima Haque, Melanie Harrison, Jiming Jiang, David A Kudrna, Anna Lipzen, Thomas H Pendergast Iv, Chris Plott, Peng Qi, Christopher A Saski, Eugene V Shakirov, David Sims, Manoj Sharma, Rita Sharma, Ada Stewart, Vasanth R Singan, Yuhong Tang, Sandra Thibivillier, Jenell Webber, Xiaoyu Weng, Melissa Williams, Guohong Albert Wu, Yuko Yoshinaga, Matthew Zane, Li Zhang, Jiyi Zhang, Kathrine D Behrman, Arvid R Boe, Philip A Fay, Felix B Fritschi, Julie D Jastrow, John Lloyd-Reilley, Juan Manuel Martínez-Reyna, Roser Matamala, Robert B Mitchell, Francis M Rouquette, Pamela C Ronald, Malay Saha, Christian M Tobias, Michael K Udvardi, Rod A Wing, Yanqi Wu, Laura E Bartley, Michael Casler, Katrien M Devos, David B Lowry, Daniel S Rokhsar, Jerry W Jenkins, Thomas E Juenger, Jeremy Schmutz
Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass. Nature 590 (7846) (2021)
Sarah B Carey, Jerry W Jenkins, John T Lovell, Florian Maumus, Avinash Sreedasyam, Adam C Payton, Shengqiang Shu, George P Tiley, Noe Fernandez Pozo, Adam L Healey, Kerrie W Barry, Cindy Chen, Mei Wang, Anna Lipzen, Christopher Daum, Christopher A Saski, Jordan C McBreen, Roth E Conrad, Leslie M Kollar, Sanna Olsson, Sanna Huttunen, Jacob B Landis, J Gordon Burleigh, Norman J Wickett, Matthew G Johnson, Stefan Andreas Rensing, Jerry W Jenkins, Jeremy Schmutz, Stuart F McDaniel
Gene-rich UV sex chromosomes harbor conserved regulators of sexual development. Science advances 7 (27) (2021)
Samira Mafi Moghaddam, Atena Oladzad, Chushin Koh, Larissa Ramsay, John P Hart, Sujan Mamidi, Genevieve M Hoopes, Avinash Sreedasyam, Andrew Wiersma, Dongyan Zhao, Jerry W Jenkins, John P Hamilton, Jerry W Jenkins, Brieanne Vaillancourt, Joshua C Wood, Jeremy Schmutz, Sateesh Kagale, Timothy Porch, Kirstin E Bett, Carol Robin Buell, Phillip E McClean
The tepary bean genome provides insight into evolution and domestication under heat stress. Nature communications 12 (1) (2021)
John T Lovell, Nolan B Bentley, Gaurab Bhattarai, Jerry W Jenkins, Avinash Sreedasyam, Yanina Alarcon, Clive Bock, Lori Beth Boston, Joseph Carlson, Kimberly Cervantes, Kristen Clermont, Sara Duke, Nick Krom, Keith Kubenka, Sujan Mamidi, Christopher P Mattison, Maria J Monteros, Cristina Pisani, Christopher Plott, Shanmugam Rajasekar, Hormat Shadgou Rhein, Charles Rohla, Mingzhou Song, Rolston St Hilaire, Shengqiang Shu, Lenny Wells, Jenell Webber, Richard J Heerema, Patricia E Klein, Patrick Conner, Xinwang Wang, L J Grauke, Jerry W Jenkins, Jeremy Schmutz, Jennifer J Randall
Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding. Nature communications 12 (1) (2021)
Noe Fernandez Pozo, Fabian B Haas, Rabea Meyberg, Kristian Karsten Ullrich, Manuel Hiss, Pierre-François Perroud, Sebastian Hanke, Viktor Kratz, Adrian F Powell, Eleanor F Vesty, Christopher G Daum, Matthew Zane, Anna Lipzen, Avinash Sreedasyam, Jane Grimwood, Juliet C Coates, Kerrie W Barry, Jeremy Schmutz, Lukas A Mueller, Stefan Andreas Rensing
PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens. The Plant journal : for cell and molecular biology 102 (1) (2020)
Sujan Mamidi, Adam Healey, Pu Huang, Jerry W Jenkins, Jerry W Jenkins, Kerrie Barry, Avinash Sreedasyam, Shengqiang Shu, John T Lovell, Maximilian Feldman, Jinxia Wu, Yunqing Yu, Cindy Chen, Jenifer Johnson, Hitoshi Sakakibara, Takatoshi Kiba, Tetsuya Sakurai, Rachel Tavares, Dmitri A Nusinow, Ivan Baxter, Jeremy Schmutz, Thomas P Brutnell, Elizabeth A Kellogg
A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci. Nature biotechnology 38 (10) (2020)
Z Jeffrey Chen, Avinash Sreedasyam, Atsumi Ando, Qingxin Song, Luis M De Santiago, Amanda M Hulse-Kemp, Mingquan Ding, Wenxue Ye, Ryan C Kirkbride, Jerry W Jenkins, Christopher Plott, John Lovell, Yu-Ming Lin, Robert Vaughn, Bo Liu, Sheron Simpson, Brian E Scheffler, Li Wen, Christopher A Saski, Corrinne E Grover, Guanjing Hu, Justin L Conover, Joseph W Carlson, Shengqiang Shu, Lori B Boston, Melissa Williams, Daniel G Peterson, Keith McGee, Don C Jones, Jonathan F Wendel, David M Stelly, Jerry W Jenkins, Jeremy Schmutz
Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement. Nature genetics 52 (5) (2020)
David John Bertioli, Jerry W Jenkins, Josh Clevenger, Olga Dudchenko, Dongying Gao, Guillermo Seijo, Soraya C M Leal-Bertioli, Longhui Ren, Andrew D Farmer, Manish K Pandey, Sergio S Samoluk, Brian Abernathy, Gaurav Agarwal, Carolina Ballén-Taborda, Connor Cameron, Jacqueline D Campbell, Carolina Chavarro, Annapurna Chitikineni, Ye Chu, Sudhansu Dash, Moaine El Baidouri, Baozhu Guo, Wei Huang, Kyung Do Kim, Walid Korani, Sophie Lanciano, Christopher G Lui, Marie Mirouze, Márcio C Moretzsohn, Melanie Pham, Jin Hee Shin, Kenta Shirasawa, Senjuti Sinharoy, Avinash Sreedasyam, Nathan T Weeks, Xinyou Zhang, Zheng Zheng, Ziqi Sun, Lutz Froenicke, Erez L Aiden, Richard Michelmore, Rajeev Kumar Varshney, C Corley Holbrook, Ethalinda K S Cannon, Brian E Scheffler, Jane Grimwood, Peggy Ozias-Akins, Steven B Cannon, Scott A Jackson, Jeremy Schmutz
The genome sequence of segmental allotetraploid peanut Arachis hypogaea. Nature genetics 51 (5) (2019)
John T Lovell, Jerry W Jenkins, David B Lowry, Sujan Mamidi, Avinash Sreedasyam, Xiaoyu Weng, Kerrie Barry, Jason Bonnette, Brandon Campitelli, Chris Daum, Sean P Gordon, Billie A Gould, Albina Khasanova, Anna Lipzen, Alice H MacQueen, Juan Diego Palacio-Mejía, Christopher Plott, Eugene V Shakirov, Shengqiang Shu, Yuko Yoshinaga, Matt Zane, Dave Kudrna, Jason D Talag, Daniel Rokhsar, Jane Grimwood, Jeremy Schmutz, Thomas E Juenger
The genomic landscape of molecular responses to natural drought stress in Panicum hallii. Nature communications 9 (1) (2018)