Stacey D Finley (Stacey Finley)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 36

Top Venues

PLoS computational biology

bioRxiv : the preprint server for biology

CPT: pharmacometrics & systems pharmacology

APL bioengineering

University of Southern California

Northwestern University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Southern California

United States

Associate Professor :: Biomedical Engineering

Johns Hopkins University

United States

Postdoctoral Fellow :: Biomedical Engineering

Education History

Northwestern University

United States

PHD :: Chemical and Biological Engineering

Publications

Niki Tavakoli, Emma J Fong, Abigail Coleman, Yu-Kai Huang, Mathias Bigger, Michael E Doche, Seungil Kim, Heinz-Josef Lenz, Nicholas Alexander Graham, Paul Macklin, Stacey D Finley, Shannon M Mumenthaler
Merging Metabolic Modeling and Imaging for Screening Therapeutic Targets in Colorectal Cancer. bioRxiv : the preprint server for biology (2024)
Neel Tangella, Colin G Cess, Geena V Ildefonso, Stacey D Finley
Integrating mechanism-based T cell phenotypes into a model of tumor-immune cell interactions. APL bioengineering 8 (3) (2024)
Niki Tavakoli, Emma J Fong, Abigail Coleman, Yu-Kai Huang, Mathias Bigger, Michael E Doche, Seungil Kim, Heinz-Josef Lenz, Nicholas Alexander Graham, Paul Macklin, Stacey D Finley, Shannon M Mumenthaler
Merging Metabolic Modeling and Imaging for Screening Therapeutic Targets in Colorectal Cancer. bioRxiv : the preprint server for biology (2024)
Niki Tavakoli, Emma J Fong, Abigail Coleman, Yu-Kai Huang, Mathias Bigger, Michael E Doche, Seungil Kim, Heinz-Josef Lenz, Nicholas Alexander Graham, Paul Macklin, Stacey D Finley, Shannon M Mumenthaler
Merging Metabolic Modeling and Imaging for Screening Therapeutic Targets in Colorectal Cancer. bioRxiv : the preprint server for biology (2024)
Neel Tangella, Colin G Cess, Geena V Ildefonso, Stacey D Finley
Integrating mechanism-based T cell phenotypes into a model of tumor-immune cell interactions. APL bioengineering 8 (3) (2024)
Niki Tavakoli, Emma J Fong, Abigail Coleman, Yu-Kai Huang, Mathias Bigger, Michael E Doche, Seungil Kim, Heinz-Josef Lenz, Nicholas Alexander Graham, Paul Macklin, Stacey D Finley, Shannon M Mumenthaler
Merging Metabolic Modeling and Imaging for Screening Therapeutic Targets in Colorectal Cancer. bioRxiv : the preprint server for biology (2024)
Vardges Tserunyan, Stacey D Finley
Information-Theoretic Analysis of a Model of CAR-4-1BB-Mediated NFκB Activation. Bulletin of mathematical biology 86 (1) (2023)
Colin G Cess, Stacey D Finley
Calibrating agent-based models to tumor images using representation learning. PLoS computational biology 19 (4) (2023)
Colin G Cess, Stacey D Finley
Calibrating agent-based models to tumor images using representation learning. PLoS computational biology 19 (4) (2023)
Patrick O Hanafin, Nusaibah Abdul Rahim, Rajnikant Sharma, Colin G Cess, Stacey D Finley, Phillip J Bergen, Tony Velkov, Jian Li, Gauri G Rao
Proof-of-concept for incorporating mechanistic insights from multi-omics analyses of polymyxin B in combination with chloramphenicol against Klebsiella pneumoniae. CPT: pharmacometrics & systems pharmacology (2023)
Colin G Cess, Stacey D Finley
Calibrating agent-based models to tumor images using representation learning. PLoS computational biology 19 (4) (2023)
Patrick O Hanafin, Nusaibah Abdul Rahim, Rajnikant Sharma, Colin G Cess, Stacey D Finley, Phillip J Bergen, Tony Velkov, Jian Li, Gauri G Rao
Proof-of-concept for incorporating mechanistic insights from multi-omics analyses of polymyxin B in combination with chloramphenicol against Klebsiella pneumoniae. CPT: pharmacometrics & systems pharmacology 12 (3) (2023)
Patrick O Hanafin, Nusaibah Abdul Rahim, Rajnikant Sharma, Colin G Cess, Stacey D Finley, Phillip J Bergen, Tony Velkov, Jian Li, Gauri G Rao
Proof-of-concept for incorporating mechanistic insights from multi-omics analyses of polymyxin B in combination with chloramphenicol against Klebsiella pneumoniae. CPT: pharmacometrics & systems pharmacology (2023)
Colin G Cess, Stacey D Finley
Calibrating agent-based models to tumor images using representation learning. PLoS computational biology 19 (4) (2023)
Patrick O Hanafin, Nusaibah Abdul Rahim, Rajnikant Sharma, Colin G Cess, Stacey D Finley, Phillip J Bergen, Tony Velkov, Jian Li, Gauri G Rao
Proof-of-concept for incorporating mechanistic insights from multi-omics analyses of polymyxin B in combination with chloramphenicol against Klebsiella pneumoniae. CPT: pharmacometrics & systems pharmacology 12 (3) (2023)
Geena V Ildefonso, Stacey D Finley
A data-driven Boolean model explains memory subsets and evolution in CD8+ T cell exhaustion. NPJ systems biology and applications 9 (1) (2023)
Vardges Tserunyan, Stacey D Finley
Information-theoretic analysis of a model of CAR-4-1BB-mediated NFκB activation. bioRxiv : the preprint server for biology (2023)
Colin G Cess, Stacey D Finley
Calibrating agent-based models to tumor images using representation learning. PLoS computational biology 19 (4) (2023)
Colin G Cess, Stacey D Finley
Calibrating agent-based models to tumor images using representation learning. PLoS computational biology 19 (4) (2023)
Colin G Cess, Stacey D Finley
Calibrating agent-based models to tumor images using representation learning. PLoS computational biology 19 (4) (2023)
Ariella D Simoni, Holly A Huber, Senta K Georgia, Stacey D Finley
Phosphatases are predicted to govern prolactin-mediated JAK-STAT signaling in pancreatic beta cells. Integrative biology : quantitative biosciences from nano to macro 14 (2) (2022)
Patrick E Gelbach, Dongqing Zheng, Scott E Fraser, Kate L White, Nicholas Alexander Graham, Stacey D Finley
Kinetic and data-driven modeling of pancreatic β-cell central carbon metabolism and insulin secretion. PLoS computational biology 18 (10) (2022)
Vardges Tserunyan, Stacey D Finley
Modelling predicts differences in chimeric antigen receptor T-cell signalling due to biological variability. Royal Society open science 9 (8) (2022)
Katelyn Millette, Keith Rodriguez, Xia Sheng, Stacey D Finley, Senta Georgia
Exogenous Lactogenic Signaling Stimulates Beta Cell Replication In Vivo and In Vitro. Biomolecules 12 (2) (2022)
Gregory P Way, Casey S Greene, Piero Carnici, Benilton S Carvalho, Michiel J L de Hoon, Stacey D Finley, Sara J C Gosline, Kim-Anh Lê Cao, Jerry S H Lee, Luigi Marchionni, Nicolas Robine, Suzanne S Sindi, Fabian Joachim Theis, Jean Yee Hwa Yang, Anne E Carpenter, Elana J Fertig
A field guide to cultivating computational biology. PLoS biology 19 (10) (2021)
Min Song, Stacey D Finley
Mechanistic characterization of endothelial sprouting mediated by pro-angiogenic signaling. Microcirculation (New York, N.Y. : 1994) (2021)
Colin G Cess, Stacey D Finley
Multi-scale modeling of macrophage-T cell interactions within the tumor microenvironment. PLoS computational biology 16 (12) (2020)
Min Song, Stacey D Finley
ERK and Akt exhibit distinct signaling responses following stimulation by pro-angiogenic factors. Cell communication and signaling : CCS 18 (1) (2020)
Sahak Z Makaryan, Stacey D Finley
An optimal control approach for enhancing natural killer cells' secretion of cytolytic molecules. APL bioengineering 4 (4) (2020)
Ryland D Mortlock, Senta K Georgia, Stacey D Finley
Dynamic Regulation of JAK-STAT Signaling Through the Prolactin Receptor Predicted by Computational Modeling. Cellular and molecular bioengineering 14 (1) (2020)
Sahak Z Makaryan, Colin G Cess, Stacey D Finley
Modeling immune cell behavior across scales in cancer. Wiley interdisciplinary reviews. Systems biology and medicine 12 (4) (2020)
Qianhui Wu, Alyssa D Arnheim, Stacey D Finley
In silico mouse study identifies tumour growth kinetics as biomarkers for the outcome of anti-angiogenic treatment. Journal of the Royal Society, Interface 15 (145) (2019)
Mahua Roy, Stacey D Finley
Metabolic reprogramming dynamics in tumor spheroids: Insights from a multicellular, multiscale model. PLoS computational biology 15 (6) (2019)
Min Song, Stacey D Finley
Mechanistic insight into activation of MAPK signaling by pro-angiogenic factors. BMC systems biology 12 (1) (2018)
Qianhui Wu, Stacey D Finley
Predictive model identifies strategies to enhance TSP1-mediated apoptosis signaling. Cell communication and signaling : CCS 15 (1) (2017)
Thomas D Gaddy, Qianhui Wu, Alyssa D Arnheim, Stacey D Finley
Mechanistic modeling quantifies the influence of tumor growth kinetics on the response to anti-angiogenic treatment. PLoS computational biology 13 (12) (2017)

Stacey D Finley.css-eqlu8i{font-size:small;padding-left:4px;} (Stacey Finley)

Publication Activity (10 Years)

Top Topics

Top Venues

Stacey D Finley (Stacey Finley)