Young Hwan Chang (Young H Chang)

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 50

Top Venues

Communications biology

bioRxiv : the preprint server for biology

Cytometry. Part A : the journal of the International Society for Analytical Cytology

Nature immunology

Oregon Health and Science University

University of California Berkeley (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Oregon Health and Science University Aug 28 2015

United States

Assistant Professor :: Biomedical Engineering and Computational Biology Program

University of California Berkeley Department of Electrical Engineering and Computer Sciences Computer Science Division Jun 12 2013 - Aug 27 2015

United States

Postdoc :: EECS, Hybrid Systems Lab

Korea Institute of Science and Technology Jul 01 2006 - Jul 31 2008

South Korea

Research Engineer :: Center for Cognitive Robotics Research

Hyundai Kia Motors Namyang Institute Feb 14 2004 - Jun 30 2006

South Korea

Suspension and Steering System Engineer :: Vehicle Test Team3

Education History

University of California Berkeley

United States

PHD :: Mechanical Engineering

Korea Advanced Institute of Science and Technology Sep 01 2002 - Feb 28 2004

South Korea

MSC :: Aerospace Engineering

Korea Advanced Institute of Science and Technology Mar 01 1998 - Aug 31 2002

South Korea

BSC :: Aerospace Engineering

Publications

Robert T Heussner, Riley M Whalen, Ashley Anderson, Heather Theison, Joseph Baik, Summer Gibbs, Melissa H Wong, Young Hwan Chang
Quantitative image analysis pipeline for detecting circulating hybrid cells in immunofluorescence images with human-level accuracy. Cytometry. Part A : the journal of the International Society for Analytical Cytology 105 (5) (2024)
Zachary Sims, Gordon B Mills, Young Hwan Chang
MIM-CyCIF: masked imaging modeling for enhancing cyclic immunofluorescence (CyCIF) with panel reduction and imputation. Communications biology 7 (1) (2024)
Robert T Heussner, Riley M Whalen, Ashley Anderson, Heather Theison, Joseph Baik, Summer Gibbs, Melissa H Wong, Young Hwan Chang
Quantitative image analysis pipeline for detecting circulating hybrid cells in immunofluorescence images with human-level accuracy. Cytometry. Part A : the journal of the International Society for Analytical Cytology 105 (5) (2024)
Zachary Sims, Gordon B Mills, Young Hwan Chang
MIM-CyCIF: masked imaging modeling for enhancing cyclic immunofluorescence (CyCIF) with panel reduction and imputation. Communications biology 7 (1) (2024)
Jeremy Copperman, Ian C McLean, Sean M Gross, Jalim Singh, Young Hwan Chang, Daniel M Zuckerman, Laura M Heiser
Single-cell morphodynamical trajectories enable prediction of gene expression accompanying cell state change. bioRxiv : the preprint server for biology (2024)
Robert T Heussner, Riley M Whalen, Ashley Anderson, Heather Theison, Joseph Baik, Summer Gibbs, Melissa H Wong, Young Hwan Chang
Quantitative image analysis pipeline for detecting circulating hybrid cells in immunofluorescence images with human-level accuracy. Cytometry. Part A : the journal of the International Society for Analytical Cytology 105 (5) (2024)
Jeremy Copperman, Ian C McLean, Sean M Gross, Jalim Singh, Young Hwan Chang, Daniel M Zuckerman, Laura M Heiser
Single-cell morphodynamical trajectories enable prediction of gene expression accompanying cell state change. bioRxiv : the preprint server for biology (2024)
Jeremy Copperman, Ian C McLean, Sean M Gross, Young Hwan Chang, Daniel M Zuckerman, Laura M Heiser
Single-cell morphodynamical trajectories enable prediction of gene expression accompanying cell state change. bioRxiv : the preprint server for biology (2024)
Robert T Heussner, Riley M Whalen, Ashley Anderson, Heather Theison, Joseph Baik, Summer Gibbs, Melissa H Wong, Young Hwan Chang
Quantitative image analysis pipeline for detecting circulating hybrid cells in immunofluorescence images with human-level accuracy. Cytometry. Part A : the journal of the International Society for Analytical Cytology 105 (5) (2024)
Jeremy Copperman, Ian C McLean, Sean M Gross, Jalim Singh, Young Hwan Chang, Daniel M Zuckerman, Laura M Heiser
Single-cell morphodynamical trajectories enable prediction of gene expression accompanying cell state change. bioRxiv : the preprint server for biology (2024)
Robert T Heussner, Riley M Whalen, Ashley Anderson, Heather Theison, Joseph Baik, Summer Gibbs, Melissa H Wong, Young Hwan Chang
Quantitative image analysis pipeline for detecting circulating hybrid cells in immunofluorescence images with human-level accuracy. Cytometry. Part A : the journal of the International Society for Analytical Cytology (2024)
Robert T Heussner, Riley M Whalen, Ashley Anderson, Heather Theison, Joseph Baik, Summer Gibbs, Melissa H Wong, Young Hwan Chang
Quantitative image analysis pipeline for detecting circulating hybrid cells in immunofluorescence images with human-level accuracy. Cytometry. Part A : the journal of the International Society for Analytical Cytology 105 (5) (2024)
Zachary Sims, Gordon B Mills, Young Hwan Chang
MIM-CyCIF: masked imaging modeling for enhancing cyclic immunofluorescence (CyCIF) with panel reduction and imputation. Communications biology 7 (1) (2024)
Ranish K Patel, Michael S Parappilly, Brett S Walker, Robert T Heussner, Alice Fung, Young Hwan Chang, Adel Kardosh, Charles D Lopez, Skye C Mayo, Melissa H Wong
Exploratory Analyses of Circulating Neoplastic-Immune Hybrid Cells as Prognostic Biomarkers in Advanced Intrahepatic Cholangiocarcinoma. International journal of molecular sciences 25 (17) (2024)
Zachary Sims, Gordon B Mills, Young Hwan Chang
MIM-CyCIF: masked imaging modeling for enhancing cyclic immunofluorescence (CyCIF) with panel reduction and imputation. Communications biology 7 (1) (2024)
Robert T Heussner, Riley M Whalen, Ashley Anderson, Heather Theison, Joseph Baik, Summer Gibbs, Melissa H Wong, Young Hwan Chang
Quantitative image analysis pipeline for detecting circulating hybrid cells in immunofluorescence images with human-level accuracy. Cytometry. Part A : the journal of the International Society for Analytical Cytology (2024)
Zachary Sims, Gordon B Mills, Young Hwan Chang
MIM-CyCIF: masked imaging modeling for enhancing cyclic immunofluorescence (CyCIF) with panel reduction and imputation. Communications biology 7 (1) (2024)
Robert T Heussner, Riley M Whalen, Ashley Anderson, Heather Theison, Joseph Baik, Summer Gibbs, Melissa H Wong, Young Hwan Chang
Quantitative image analysis pipeline for detecting circulating hybrid cells in immunofluorescence images with human-level accuracy. Cytometry. Part A : the journal of the International Society for Analytical Cytology (2024)
Kaoutar Ait-Ahmad, Cigdem Ak, Guillaume Thibault, Young Hwan Chang, Sebnem Ece Eksi
AxonFinder: Automated segmentation of tumor innervating neuronal fibers. bioRxiv : the preprint server for biology (2024)
Jeremy Copperman, Ian C McLean, Sean M Gross, Young Hwan Chang, Daniel M Zuckerman, Laura M Heiser
Single-cell morphodynamical trajectories enable prediction of gene expression accompanying cell state change. bioRxiv : the preprint server for biology (2024)
Jeremy Copperman, Sean M Gross, Young Hwan Chang, Laura M Heiser, Daniel M Zuckerman
Morphodynamical cell state description via live-cell imaging trajectory embedding. Communications biology 6 (1) (2023)
Sandhya Prabhakaran, Clarence Yapp, Gregory J Baker, Johanna Beyer, Young Hwan Chang, Allison L Creason, Robert Krueger, Jeremy Muhlich, Nathan Heath Patterson, Kevin Sidak, Damir Sudar, Adam J Taylor, Luke Ternes, Jakob Troidl, Yubin Xie, Artem Sokolov, Darren R Tyson, null null
Addressing persistent challenges in digital image analysis of cancerous tissues. bioRxiv : the preprint server for biology (2023)
Maria M Steele, Abhinav Jaiswal, Ines Delclaux, Ian D Dryg, Dhaarini Murugan, Julia Femel, Sunny Son, Haley du Bois, Cameron Hill, Sancy A Leachman, Young Hwan Chang, Lisa M Coussens, Niroshana Anandasabapathy, Amanda W Lund
Author Correction: T cell egress via lymphatic vessels is tuned by antigen encounter and limits tumor control. Nature immunology (2023)
Maria M Steele, Abhinav Jaiswal, Ines Delclaux, Ian D Dryg, Dhaarini Murugan, Julia Femel, Sunny Son, Haley du Bois, Cameron Hill, Sancy A Leachman, Young Hwan Chang, Lisa M Coussens, Niroshana Anandasabapathy, Amanda W Lund
T cell egress via lymphatic vessels is tuned by antigen encounter and limits tumor control. Nature immunology (2023)
Young Hwan Chang, Zachary Sims, Gordon Mills
MIM-CyCIF: Masked Imaging Modeling for Enhancing Cyclic Immunofluorescence (CyCIF) with Panel Reduction and Imputation. Research square (2023)
Jeanette A I Johnson, Genevieve L Stein-O'Brien, Max Booth, Randy Heiland, Furkan Kurtoglu, Daniel R Bergman, Elmar Bucher, Atul Deshpande, André Forjaz, Michael Getz, Ines Godet, Melissa R Lyman, John Metzcar, Jacob T Mitchell, Andrew D Raddatz, Heber L Rocha, Jacobo Solorzano, Aneequa Sundus, Yafei Wang, Daniele M Gilkes, Luciane Tsukamoto Kagohara, Ashley L Kiemen, Elizabeth D Thompson, Denis Wirtz, Pei-Hsun Wu, Neeha Zaidi, Lei Zheng, Jacquelyn W Zimmerman, Elizabeth D Thompson, Young Hwan Chang, Lisa M Coussens, Joe W Gray, Laura M Heiser, Elana J Fertig, Paul Macklin
Digitize your Biology! Modeling multicellular systems through interpretable cell behavior. bioRxiv : the preprint server for biology (2023)
Zinab O Doha, Xiaoyan Wang, Nicholas L Calistri, Jennifer Eng, Colin J Daniel, Luke Ternes, Eun Na Kim, Carl Pelz, Michael Munks, Courtney Betts, Sunjong Kwon, Elmar Bucher, Xi Li, Trent Waugh, Zuzana Tatarova, Dylan Blumberg, Aaron Ko, Nell Kirchberger, Jennifer A Pietenpol, Melinda E Sanders, Ellen M Langer, Mu-Shui Dai, Gordon B Mills, Koei Chin, Young Hwan Chang, Lisa M Coussens, Joe W Gray, Laura M Heiser, Rosalie C Sears
MYC Deregulation and PTEN Loss Model Tumor and Stromal Heterogeneity of Aggressive Triple-Negative Breast Cancer. Nature communications 14 (1) (2023)
Robert T Heussner, Riley M Whalen, Ashley Anderson, Heather Theison, Joseph Baik, Summer Gibbs, Melissa H Wong, Young Hwan Chang
Quantitative image analysis pipeline for detecting circulating hybrid cells in immunofluorescence images with human-level accuracy. bioRxiv : the preprint server for biology (2023)
Jeremy Copperman, Sean M Gross, Young Hwan Chang, Laura M Heiser, Daniel M Zuckerman
Morphodynamical cell state description via live-cell imaging trajectory embedding. Communications biology 6 (1) (2023)
Jeremy Copperman, Sean M Gross, Young Hwan Chang, Laura M Heiser, Daniel M Zuckerman
Morphodynamical cell state description via live-cell imaging trajectory embedding. Communications biology 6 (1) (2023)
Jeremy Copperman, Sean M Gross, Young Hwan Chang, Laura M Heiser, Daniel M Zuckerman
Morphodynamical cell state description via live-cell imaging trajectory embedding. Communications biology 6 (1) (2023)
Jeremy Copperman, Sean M Gross, Young Hwan Chang, Laura M Heiser, Daniel M Zuckerman
Morphodynamical cell state description via live-cell imaging trajectory embedding. Communications biology 6 (1) (2023)
Maria M Steele, Abhinav Jaiswal, Ines Delclaux, Ian D Dryg, Dhaarini Murugan, Julia Femel, Sunny Son, Haley du Bois, Cameron Hill, Sancy A Leachman, Young Hwan Chang, Lisa M Coussens, Niroshana Anandasabapathy, Amanda W Lund
T cell egress via lymphatic vessels is tuned by antigen encounter and limits tumor control. Nature immunology (2023)
Maria M Steele, Abhinav Jaiswal, Ines Delclaux, Ian D Dryg, Dhaarini Murugan, Julia Femel, Sunny Son, Haley du Bois, Cameron Hill, Sancy A Leachman, Young Hwan Chang, Lisa M Coussens, Niroshana Anandasabapathy, Amanda W Lund
T cell egress via lymphatic vessels is tuned by antigen encounter and limits tumor control. Nature immunology (2023)
Maria M Steele, Abhinav Jaiswal, Ines Delclaux, Ian D Dryg, Dhaarini Murugan, Julia Femel, Sunny Son, Haley du Bois, Cameron Hill, Sancy A Leachman, Young Hwan Chang, Lisa M Coussens, Niroshana Anandasabapathy, Amanda W Lund
Author Correction: T cell egress via lymphatic vessels is tuned by antigen encounter and limits tumor control. Nature immunology (2023)
Zachary Sims, Gordon B Mills, Young Hwan Chang
MIM-CyCIF: Masked Imaging Modeling for Enhancing Cyclic Immunofluorescence (CyCIF) with Panel Reduction and Imputation. bioRxiv : the preprint server for biology (2023)
Luke Ternes, Jia-Ren Lin, Yu-An Chen, Joe W Gray, Young Hwan Chang
Computational multiplex panel reduction to maximize information retention in breast cancer tissue microarrays. PLoS computational biology 18 (9) (2022)
Luke Ternes, Mark A Dane, Sean Gross, Marilyne Labrie, Gordon Mills, Joe Gray, Laura M Heiser, Young Hwan Chang
A multi-encoder variational autoencoder controls multiple transformational features in single-cell image analysis. Communications biology 5 (1) (2022)
Denis Schapiro, Clarence Yapp, Artem Sokolov, Sheila M Reynolds, Yu-An Chen, Damir Sudar, Yubin Xie, Jeremy L Muhlich, Raquel Arias-Camison, Sarah Arena, Adam J Taylor, Milen Nikolov, Madison Tyler, Jia-Ren Lin, Erik A Burlingame, null null, Young Hwan Chang, Samouil L Farhi, Vesteinn Thorsson, Nithya Venkatamohan, Julia L Drewes, Dana Pe'er, David A Gutman, Markus D Herrmann, Nils Gehlenborg, Peter Bankhead, Joseph T Roland, John M Herndon, Michael Paul Snyder, R Michael Angelo, Garry Nolan, Jason R Swedlow, Nikolaus Schultz, Daniel T Merrick, Sarah A Mazzili, Ethan Cerami, Scott J Rodig, Sandro Santagata, Peter Karl Sorger
MITI minimum information guidelines for highly multiplexed tissue images. Nature methods 19 (3) (2022)
N Mohammad Mirzaei, Zuzana Tatarova, Wenrui Hao, Navid Changizi, Alireza Asadpoure, Ioannis K Zervantonakis, Yu Hu, Young Hwan Chang, Leili Shahriyari
A PDE Model of Breast Tumor Progression in MMTV-PyMT Mice. Journal of personalized medicine 12 (5) (2022)
Michael S Parappilly, Yuki Chin, Riley M Whalen, Ashley N Anderson, Trinity S Robinson, Luke Strgar, Thomas Lee Sutton, Patrick Conley, Christopher Klocke, Summer L Gibbs, Young Hwan Chang, Guanming Wu, Melissa H Wong, Alison H Skalet
Circulating Neoplastic-Immune Hybrid Cells Predict Metastatic Progression in Uveal Melanoma. Cancers 14 (19) (2022)
N Mohammad Mirzaei, Navid Changizi, Alireza Asadpoure, Sumeyye Su, Dilruba Sofia, Zuzana Tatarova, Ioannis K Zervantonakis, Young Hwan Chang, Leili Shahriyari
Investigating key cell types and molecules dynamics in PyMT mice model of breast cancer through a mathematical model. PLoS computational biology 18 (3) (2022)
Marilyne Labrie, Allen Li, Allison L Creason, Courtney Betts, Jamie Keck, Brett E Johnson, Shamilene Sivagnanam, Christopher Boniface, Hongli Ma, Aurora Blucher, Young Hwan Chang, Koei Chin, Jacqueline Vuky, Alexander R Guimaraes, Molly Downey, Jeong Youn Lim, Lina Gao, Kiara Siex, Swapnil Parmar, Annette Kolodzie, Paul T Spellman, Jeremy Goecks, Lisa M Coussens, Christopher L Corless, Raymond C Bergan, Joe W Gray, Gordon B Mills, Zahi I Mitri
Multiomics analysis of serial PARP inhibitor treated metastatic TNBC inform on rational combination therapies. NPJ precision oncology 5 (1) (2021)
N Mohammad Mirzaei, Sumeyye Su, Dilruba Sofia, Maura Hegarty, Mohamed H Abdel-Rahman, Alireza Asadpoure, Colleen M Cebulla, Young Hwan Chang, Wenrui Hao, Pamela R Jackson, Adrian V Lee, Daniel G Stover, Zuzana Tatarova, Ioannis K Zervantonakis, Leili Shahriyari
A Mathematical Model of Breast Tumor Progression Based on Immune Infiltration. Journal of personalized medicine 11 (10) (2021)
Anne Trinh, Carlos R Gil Del Alcazar, Sachet A Shukla, Koei Chin, Young Hwan Chang, Guillaume Thibault, Jennifer Eng, Bojana Jovanović, C Marcelo Aldaz, So Yeon Park, Joon Jeong, Catherine J Wu, Joe Gray, Kornelia Polyak
Genomic Alterations during the In Situ to Invasive Ductal Breast Carcinoma Transition Shaped by the Immune System. Molecular cancer research : MCR 19 (4) (2020)
Young Hwan Chang, Koei Chin, Guillaume Thibault, Jennifer Eng, Erik Burlingame, Joe W Gray
RESTORE: Robust intEnSiTy nORmalization mEthod for multiplexed imaging. Communications biology 3 (1) (2020)
Geoffrey F Schau, Erik A Burlingame, Guillaume Thibault, Tauangtham Anekpuritanang, Ying Wang, Joe W Gray, Christopher Corless, Young Hwan Chang
Predicting primary site of secondary liver cancer with a neural estimator of metastatic origin. Journal of medical imaging (Bellingham, Wash.) 7 (1) (2020)
Takahiro Tsujikawa, Guillaume Thibault, Vahid Azimi, Sam Sivagnanam, Grace Banik, Casey Means, Rie Kawashima, Daniel R Clayburgh, Joe W Gray, Lisa M Coussens, Young Hwan Chang
Robust Cell Detection and Segmentation for Image Cytometry Reveal Th17 Cell Heterogeneity. Cytometry. Part A : the journal of the International Society for Analytical Cytology 95 (4) (2019)
Ryan S Lane, Julia Femel, Alec P Breazeale, Christopher P Loo, Guillaume Thibault, Andy Kaempf, Motomi Mori, Takahiro Tsujikawa, Young Hwan Chang, Amanda W Lund
IFNγ-activated dermal lymphatic vessels inhibit cytotoxic T cells in melanoma and inflamed skin. The Journal of experimental medicine 215 (12) (2018)
Young Hwan Chang, You Jeong Heo, Junhun Cho, Sang Yong Song, Jeeyun Lee, Kyoung-Mee Kim
Computational measurement of tumor immune microenvironment in gastric adenocarcinomas. Scientific reports 8 (1) (2018)

Young Hwan Chang.css-eqlu8i{font-size:small;padding-left:4px;} (Young H Chang)

Publication Activity (10 Years)

Top Topics

Top Venues

Young Hwan Chang (Young H Chang)