Peter Bankhead

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 16

Top Venues

NPJ precision oncology

Histopathology

The Journal of pathology

Cancers

University of Edinburgh

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Edinburgh Sep 01 2018

United Kingdom

Senior Lecturer :: Division of Pathology

Publications

Jakub R Kaczmarzyk, Alan O'Callaghan, Fiona Inglis, Swarad Gat, Tahsin Kurc, Rajarsi Gupta, Erich Bremer, Peter Bankhead, Joseph Saltz
Open and reusable deep learning for pathology with WSInfer and QuPath. NPJ precision oncology 8 (1) (2024)
Jakub R Kaczmarzyk, Alan O'Callaghan, Fiona Inglis, Swarad Gat, Tahsin Kurc, Rajarsi Gupta, Erich Bremer, Peter Bankhead, Joseph Saltz
Open and reusable deep learning for pathology with WSInfer and QuPath. NPJ precision oncology 8 (1) (2024)
Jakub R Kaczmarzyk, Alan O'Callaghan, Fiona Inglis, Swarad Gat, Tahsin Kurc, Rajarsi Gupta, Erich Bremer, Peter Bankhead, Joseph Saltz
Open and reusable deep learning for pathology with WSInfer and QuPath. NPJ precision oncology 8 (1) (2024)
Jakub R Kaczmarzyk, Alan O'Callaghan, Fiona Inglis, Swarad Gat, Tahsin Kurc, Rajarsi Gupta, Erich Bremer, Peter Bankhead, Joseph Saltz
Open and reusable deep learning for pathology with WSInfer and QuPath. NPJ precision oncology 8 (1) (2024)
Jakub R Kaczmarzyk, Alan O'Callaghan, Fiona Inglis, Swarad Gat, Tahsin Kurc, Rajarsi Gupta, Erich Bremer, Peter Bankhead, Joseph Saltz
Open and reusable deep learning for pathology with WSInfer and QuPath. NPJ precision oncology 8 (1) (2024)
Ross J Porter, Shahida Din, Peter Bankhead, Anca Oniscu, Mark J Arends
QuPath Algorithm Accurately Identifies MLH1-Deficient Inflammatory Bowel Disease-Associated Colorectal Cancers in a Tissue Microarray. Diagnostics (Basel, Switzerland) 13 (11) (2023)
Pau Carrillo-Barberà, Ana Maria Rondelli, Jose Manuel Morante-Redolat, Bertrand Vernay, Anna Williams, Peter Bankhead
AimSeg: A machine-learning-aided tool for axon, inner tongue and myelin segmentation. PLoS computational biology 19 (11) (2023)
Joy Edwards-Hicks, Huizhong Su, Maurizio Mangolini, Kubra K Yoneten, Jimi C Wills, Giovanny Rodriguez-Blanco, Christine Young, Kevin Cho, Heather Barker, Morwenna Muir, Ania Naila Guerrieri, Xue-Feng Li, Rachel White, Piotr Manasterski, Elena Mandrou, Karen Wills, Jingyu Chen, Emily Abraham, Kianoosh Sateri, Bin-Zhi Qian, Peter Bankhead, Mark J Arends, Noor Gammoh, Alexander von Kriegsheim, Gary J Patti, Andrew H Sims, Juan Carlos Acosta, Valerie Brunton, Kamil R Kranc, Maria A Christophorou, Erika L Pearce, Ingo Ringshausen, Andrew J Finch
MYC sensitises cells to apoptosis by driving energetic demand. Nature communications 13 (1) (2022)
Peter Bankhead
Developing image analysis methods for digital pathology. The Journal of pathology 257 (4) (2022)
Denis Schapiro, Clarence Yapp, Artem Sokolov, Sheila M Reynolds, Yu-An Chen, Damir Sudar, Yubin Xie, Jeremy L Muhlich, Raquel Arias-Camison, Sarah Arena, Adam J Taylor, Milen Nikolov, Madison Tyler, Jia-Ren Lin, Erik A Burlingame, null null, Young Hwan Chang, Samouil L Farhi, Vesteinn Thorsson, Nithya Venkatamohan, Julia L Drewes, Dana Pe'er, David A Gutman, Markus D Herrmann, Nils Gehlenborg, Peter Bankhead, Joseph T Roland, John M Herndon, Michael Paul Snyder, R Michael Angelo, Garry Nolan, Jason R Swedlow, Nikolaus Schultz, Daniel T Merrick, Sarah A Mazzili, Ethan Cerami, Scott J Rodig, Sandro Santagata, Peter Karl Sorger
MITI minimum information guidelines for highly multiplexed tissue images. Nature methods 19 (3) (2022)
C. Simon Herrington, Richard Poulsom, Nischalan Pillay, Peter Bankhead, Philip J Coates
Recent Advances in Pathology: the 2022 Annual Review Issue of The Journal of Pathology. The Journal of pathology 257 (4) (2022)
Justus Kaufmann, Christophe A N Biscio, Peter Bankhead, Stefanie Zimmer, Heinz Schmidberger, Ege Rubak, Arnulf Mayer
Using the R Package Spatstat to Assess Inhibitory Effects of Microregional Hypoxia on the Infiltration of Cancers of the Head and Neck Region by Cytotoxic T Lymphocytes. Cancers 13 (8) (2021)
Natalie C Fisher, Maurice B Loughrey, Helen G Coleman, Melvin D Gelbard, Peter Bankhead, Philip D Dunne
Development of a semi-automated method for tumour budding assessment in colorectal cancer and comparison with manual methods. Histopathology (2021)
Florian Levet, Anne E Carpenter, Kevin W Eliceiri, Anna Kreshuk, Peter Bankhead, Robert Haase
Developing open-source software for bioimage analysis: opportunities and challenges. F1000Research 10 (2021)
Maurice B Loughrey, Jason McGrath, Helen G Coleman, Peter Bankhead, Perry Maxwell, Claire McGready, Victoria Bingham, Matthew Phillip Humphries, Stephanie G Craig, Stephen McQuaid, Manuel Salto-Tellez, Jacqueline A James
Identifying mismatch repair-deficient colon cancer: near-perfect concordance between immunohistochemistry and microsatellite instability testing in a large, population-based series. Histopathology 78 (3) (2020)
Jakob Nikolas Kather, Meggy Suarez-Carmona, Pornpimol Charoentong, Cleo-Aron Weis, Daniela Hirsch, Peter Bankhead, Marcel Horning, Dyke Ferber, Ivan Kel, Esther Herpel, Sarah Schott, Inka Zörnig, Jochen Utikal, Alexander Marx, Timo Gaiser, Herrmann Brenner, Jenny Chang-Claude, Michael Hoffmeister, Dirk Jäger, Niels Halama
Topography of cancer-associated immune cells in human solid tumors. eLife 7 (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Peter Bankhead