R Michael Angelo (Michael Angelo, Mike Angelo)

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 29

Top Topics

Positive Breast Cancer

Fluorescence Imaging

Top Venues

bioRxiv : the preprint server for biology

Science (New York, N.Y.)

Cancer discovery

Science advances

This page only lists publications with an associated author ORCID identifier.

Publications

J Lorenz Rumberger, Noah F Greenwald, Jolene S Ranek, Potchara Boonrat, Cameron Walker, Jannik Franzen, Sricharan Reddy Varra, Alex Kong, Cameron Sowers, Candace C Liu, Inna Averbukh, Hadeesha Piyadasa, Rami Vanguri, Iris Nederlof, Xuefei Julie Wang, David Van Valen, Marleen Kok, Travis J Hollmann, Dagmar Kainmueller, R Michael Angelo
Automated classification of cellular expression in multiplexed imaging data with Nimbus. bioRxiv : the preprint server for biology (2024)
Kathleen E Houlahan, Aziz Khan, Noah F Greenwald, Cristina Sotomayor Vivas, Robert B West, R Michael Angelo, Christina Curtis
Germline-mediated immunoediting sculpts breast cancer subtypes and metastatic proclivity. Science (New York, N.Y.) 384 (6699) (2024)
Cameron R Walker, R Michael Angelo
Insights and Opportunity Costs in Applying Spatial Biology to Study the Tumor Microenvironment. Cancer discovery 14 (5) (2024)
Cameron R Walker, R Michael Angelo
Insights and Opportunity Costs in Applying Spatial Biology to Study the Tumor Microenvironment. Cancer discovery 14 (5) (2024)
Kathleen E Houlahan, Aziz Khan, Noah F Greenwald, Cristina Sotomayor Vivas, Robert B West, R Michael Angelo, Christina Curtis
Germline-mediated immunoediting sculpts breast cancer subtypes and metastatic proclivity. Science (New York, N.Y.) 384 (6699) (2024)
Cameron R Walker, R Michael Angelo
Insights and Opportunity Costs in Applying Spatial Biology to Study the Tumor Microenvironment. Cancer discovery (2024)
Bokai Zhu, Yunhao Bai, Yao Yu Yeo, Xiaowei Lu, Xavier Rovira-Clavé, Han Chen, Jason Yeung, Georg K Gerber, R Michael Angelo, Alex K Shalek, Garry P Nolan, Sizun J Jiang
A Spatial Multi-Modal Dissection of Host-Microbiome Interactions within the Colitis Tissue Microenvironment. bioRxiv : the preprint server for biology (2024)
Bokai Zhu, Yunhao Bai, Yao Yu Yeo, Xiaowei Lu, Xavier Rovira-Clavé, Han Chen, Jason Yeung, Georg K Gerber, R Michael Angelo, Alex K Shalek, Garry P Nolan, Sizun J Jiang
A Spatial Multi-Modal Dissection of Host-Microbiome Interactions within the Colitis Tissue Microenvironment. bioRxiv : the preprint server for biology (2024)
J Lorenz Rumberger, Noah F Greenwald, Jolene S Ranek, Potchara Boonrat, Cameron Walker, Jannik Franzen, Sricharan Reddy Varra, Alex Kong, Cameron Sowers, Candace C Liu, Inna Averbukh, Hadeesha Piyadasa, Rami Vanguri, Iris Nederlof, Xuefei Julie Wang, David Van Valen, Marleen Kok, Travis J Hollmann, Dagmar Kainmueller, R Michael Angelo
Automated classification of cellular expression in multiplexed imaging data with Nimbus. bioRxiv : the preprint server for biology (2024)
Kathleen E Houlahan, Aziz Khan, Noah F Greenwald, Cristina Sotomayor Vivas, Robert B West, R Michael Angelo, Christina Curtis
Germline-mediated immunoediting sculpts breast cancer subtypes and metastatic proclivity. Science (New York, N.Y.) 384 (6699) (2024)
Bokai Zhu, Yunhao Bai, Yao Yu Yeo, Xiaowei Lu, Xavier Rovira-Clavé, Han Chen, Jason Yeung, Georg K Gerber, R Michael Angelo, Alex K Shalek, Garry P Nolan, Sizun J Jiang
A Spatial Multi-Modal Dissection of Host-Microbiome Interactions within the Colitis Tissue Microenvironment. bioRxiv : the preprint server for biology (2024)
Shirley Greenbaum, Inna Averbukh, Erin Soon, Gabrielle Rizzuto, Alex Baranski, Noah F Greenwald, Adam Kagel, Marc Bosse, Eleni G Jaswa, Zumana Khair, Shirley Kwok, Shiri Warshawsky, Hadeesha Piyadasa, Mako Goldston, Angie Spence, Geneva Miller, Morgan S Schwartz, William Graf, David Van Valen, Virginia D Winn, Travis Hollmann, Leeat Keren, Matt van de Rijn, R Michael Angelo
A spatially resolved timeline of the human maternal-fetal interface. Nature 619 (7970) (2023)
Dunja Mrdjen, Meelad Amouzgar, Bryan Cannon, Candace Liu, Angie Spence, Erin F McCaffrey, Anusha Bharadwaj, Dmitry Tebaykin, Syed Bukhari, Felix J Hartmann, Adam Kagel, Kausalia Vijayaragavan, John Paul Oliveria, Koya Yakabi, Geidy Serrano, Maria Corrada, Claudia H Kawas, Christine Camacho Fullaway, Marc Bosse, Robert Tibshirani, Thomas Beach, R Michael Angelo, Thomas J Montine, Sean C Bendall
Spatial proteomics reveals human microglial states shaped by anatomy and neuropathology. Research square (2023)
Candace C Liu, Noah F Greenwald, Alex Kong, Erin F McCaffrey, Ke Xuan Leow, Dunja Mrdjen, Bryan J Cannon, Josef Lorenz Rumberger, Sricharan Reddy Varra, R Michael Angelo
Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering. Nature communications 14 (1) (2023)
Hadeesha Piyadasa, R Michael Angelo, Sean C Bendall
Spatial proteomics of tumor microenvironments reveal why location matters. Nature immunology (2023)
Rashmi Kumar, Candace C Liu, Sean C Bendall, R Michael Angelo
Synthesis, Characterization, and Applications of a Superior Dendrimer-Based Polymer for Multiplexed Ion Beam Imaging Time-of-Flight Analysis. Biomacromolecules (2023)
Philipp J Rauch, Jayakrishnan Gopakumar, Alexander James Silver, Daniel Nachun, Herra Ahmad, Marie McConkey, Tetsushi Nakao, Marc Bosse, Thiago Rentz, Nora Vivanco Gonzalez, Noah F Greenwald, Erin F McCaffrey, Zumana Khair, Manu Gopakumar, Kameron B Rodrigues, Amy E Lin, Eti Sinha, Maia Fefer, Drew N Cohen, Amélie Vromman, Eugenia Shvartz, Galina Sukhova, Sean Bendall, R Michael Angelo, Peter Libby, Benjamin L Ebert, Siddhartha Jaiswal
Loss-of-function mutations in Dnmt3a and Tet2 lead to accelerated atherosclerosis and concordant macrophage phenotypes. Nature cardiovascular research 2 (9) (2023)
Yunhao Bai, Bokai Zhu, John-Paul Oliveria, Bryan J Cannon, Dorien Feyaerts, Marc Bosse, Kausalia Vijayaragavan, Noah F Greenwald, Darci J Phillips, Christian M Schürch, Samuel M Naik, Edward A Ganio, Brice L Gaudilliere, Scott J Rodig, Michael B Miller, R Michael Angelo, Sean C Bendall, Xavier Rovira-Clavé, Garry P Nolan, Sizun J Jiang
Expanded vacuum-stable gels for multiplexed high-resolution spatial histopathology. Nature communications 14 (1) (2023)
Kathleen E Houlahan, Aziz Khan, Noah F Greenwald, Robert B West, R Michael Angelo, Christina Curtis
Germline-mediated immunoediting sculpts breast cancer subtypes and metastatic proclivity. bioRxiv : the preprint server for biology (2023)
Candace C Liu, Marc Bosse, Alex Kong, Adam Kagel, Robert Kinders, Stephen M Hewitt, Sushama Varma, Matt van de Rijn, Stanisław H Nowak, Sean C Bendall, R Michael Angelo
Reproducible, high-dimensional imaging in archival human tissue by multiplexed ion beam imaging by time-of-flight (MIBI-TOF). Laboratory investigation; a journal of technical methods and pathology 102 (7) (2022)
Denis Schapiro, Clarence Yapp, Artem Sokolov, Sheila M Reynolds, Yu-An Chen, Damir Sudar, Yubin Xie, Jeremy L Muhlich, Raquel Arias-Camison, Sarah Arena, Adam J Taylor, Milen Nikolov, Madison Tyler, Jia-Ren Lin, Erik A Burlingame, null null, Young Hwan Chang, Samouil L Farhi, Vesteinn Thorsson, Nithya Venkatamohan, Julia L Drewes, Dana Pe'er, David A Gutman, Markus D Herrmann, Nils Gehlenborg, Peter Bankhead, Joseph T Roland, John M Herndon, Michael Paul Snyder, R Michael Angelo, Garry Nolan, Jason R Swedlow, Nikolaus Schultz, Daniel T Merrick, Sarah A Mazzili, Ethan Cerami, Scott J Rodig, Sandro Santagata, Peter Karl Sorger
MITI minimum information guidelines for highly multiplexed tissue images. Nature methods 19 (3) (2022)
Erin F McCaffrey, Michele Donato, Leeat Keren, Zhenghao Chen, Alea Delmastro, Megan Burke Fitzpatrick, Sanjana Gupta, Noah F Greenwald, Alex Baranski, William Graf, Rashmi Kumar, Marc Bosse, Christine Camacho Fullaway, Pratista K Ramdial, Erna Forgó, Vladimir Jojic, David Van Valen, Smriti Mehra, Shabaana Abdul Khader, Sean C Bendall, Matt van de Rijn, Daniel Kalman, Deepak Kaushal, Robert L Hunter, Niaz Banaei, Adrie J C Steyn, Purvesh Khatri, R Michael Angelo
The immunoregulatory landscape of human tuberculosis granulomas. Nature immunology 23 (2) (2022)
Thanaphong Phongpreecha, Chandresh R Gajera, Candace C Liu, Kausalia Vijayaragavan, Alan L Chang, Martin Becker, Ramin Fallahzadeh, Rosemary Fernandez, Nadia Postupna, Emily Sherfield, Dmitry Tebaykin, Caitlin S Latimer, Carol A Shively, Thomas C Register, Suzanne Craft, Kathleen S Montine, Edward J Fox, Kathleen L Poston, C Dirk Keene, R Michael Angelo, Sean C Bendall, Nima Aghaeepour, Thomas J Montine
Single-synapse analyses of Alzheimer's disease implicate pathologic tau, DJ1, CD47, and ApoE. Science advances 7 (51) (2021)
Aalok Patwa, Rikiya Yamashita, Jin Long, Tyler Risom, R Michael Angelo, Leeat Keren, Daniel L Rubin
Multiplexed imaging analysis of the tumor-immune microenvironment reveals predictors of outcome in triple-negative breast cancer. Communications biology 4 (1) (2021)
Noah F Greenwald, Geneva Miller, Erick Moen, Alex Kong, Adam Kagel, Thomas Dougherty, Christine Camacho Fullaway, Brianna J McIntosh, Ke Xuan Leow, Morgan Sarah Schwartz, Cole Pavelchek, Sunny Cui, Isabella Camplisson, Omer Bar-Tal, Jaiveer Singh, Mara Fong, Gautam Chaudhry, Zion Abraham, Jackson Moseley, Shiri Warshawsky, Erin Soon, Shirley Greenbaum, Tyler Risom, Travis J Hollman, Sean C Bendall, Leeat Keren, William Graf, R Michael Angelo, David Van Valen
Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning. Nature biotechnology (2021)
John W Hickey, Elizabeth Kathleen Neumann, Andrea J Radtke, Jeannie M Camarillo, Rebecca T Beuschel, Alexandre Albanese, Elizabeth McDonough, Julia Hatler, Anne E Wiblin, Jeremy Fisher, Joshua Croteau, Eliza C Small, Anup Sood, Richard M Caprioli, R Michael Angelo, Garry P Nolan, Kwanghun Chung, Stephen M Hewitt, Ronald N Germain, Jeffrey M Spraggins, Emma Lundberg, Michael Paul Snyder, Michael P Snyder, Sinem K Saka
Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging. Nature methods (2021)
Alex Baranski, Idan Milo, Shirley Greenbaum, John-Paul Oliveria, Dunja Mrjden, R Michael Angelo, Leeat Keren
MAUI (MBI Analysis User Interface)-An image processing pipeline for Multiplexed Mass Based Imaging. PLoS computational biology 17 (4) (2021)
Gabriela Lomeli, Marc Bosse, Sean C Bendall, R Michael Angelo, Amy E Herr
Multiplexed Ion Beam Imaging Readout of Single-Cell Immunoblotting. Analytical chemistry 93 (24) (2021)
Leeat Keren, Marc Bosse, Steve Thompson, Tyler Risom, Kausalia Vijayaragavan, Erin F McCaffrey, Diana M Marquez, Roshan Angoshtari, Noah F Greenwald, Harris Fienberg, Jennifer Wang, Neeraja Kambham, David Kirkwood, Garry P Nolan, Thomas J Montine, Stephen J Galli, Robert B West, Sean C Bendall, R Michael Angelo
MIBI-TOF: A multiplexed imaging platform relates cellular phenotypes and tissue structure. Science advances 5 (10) (2019)