Laura M Heiser (Laura Heiser)

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 29

Top Topics

Gene Expression

Fluorescence Imaging

Top Venues

Nature communications

Communications biology

bioRxiv : the preprint server for biology

BMC bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Brian S White, Aurélien de Reyniès, Aaron M Newman, Joshua J Waterfall, Andrew Lamb, Florent Petitprez, Yating Lin, Rongshan Yu, Martin E Guerrero-Gimenez, Sergii Domanskyi, Gianni Monaco, Verena Chung, Jineta Banerjee, Daniel S Derrick, Alberto Valdeolivas, Haojun Li, Xu Xiao, Shun Wang, Frank Zheng, Wenxian Yang, Carlos A Catania, Benjamin J Lang, Thomas J Bertus, Carlo Piermarocchi, Francesca Pia Caruso, Michele Ceccarelli, Thomas Yu, Xindi Guo, Julie Bletz, John Coller, Holden Terry Maecker, Caroline Duault, Vida Shokoohi, Shailja Patel, Joanna E Liliental, Stockard Simon, null null, Julio Saez-Rodriguez, Laura M Heiser, Justin Guinney, Andrew J Gentles
Community assessment of methods to deconvolve cellular composition from bulk gene expression. Nature communications 15 (1) (2024)
Brian S White, Aurélien de Reyniès, Aaron M Newman, Joshua J Waterfall, Andrew Lamb, Florent Petitprez, Yating Lin, Rongshan Yu, Martin E Guerrero-Gimenez, Sergii Domanskyi, Gianni Monaco, Verena Chung, Jineta Banerjee, Daniel S Derrick, Alberto Valdeolivas, Haojun Li, Xu Xiao, Shun Wang, Frank Zheng, Wenxian Yang, Carlos A Catania, Benjamin J Lang, Thomas J Bertus, Carlo Piermarocchi, Francesca Pia Caruso, Michele Ceccarelli, Thomas Yu, Xindi Guo, Julie Bletz, John Coller, Holden Terry Maecker, Caroline Duault, Vida Shokoohi, Shailja Patel, Joanna E Liliental, Stockard Simon, null null, Julio Saez-Rodriguez, Laura M Heiser, Justin Guinney, Andrew J Gentles
Community assessment of methods to deconvolve cellular composition from bulk gene expression. Nature communications 15 (1) (2024)
Jeremy Copperman, Ian C McLean, Sean M Gross, Jalim Singh, Young Hwan Chang, Daniel M Zuckerman, Laura M Heiser
Single-cell morphodynamical trajectories enable prediction of gene expression accompanying cell state change. bioRxiv : the preprint server for biology (2024)
Jeremy Copperman, Ian C McLean, Sean M Gross, Jalim Singh, Young Hwan Chang, Daniel M Zuckerman, Laura M Heiser
Single-cell morphodynamical trajectories enable prediction of gene expression accompanying cell state change. bioRxiv : the preprint server for biology (2024)
Jeremy Copperman, Ian C McLean, Sean M Gross, Young Hwan Chang, Daniel M Zuckerman, Laura M Heiser
Single-cell morphodynamical trajectories enable prediction of gene expression accompanying cell state change. bioRxiv : the preprint server for biology (2024)
Jeremy Copperman, Ian C McLean, Sean M Gross, Jalim Singh, Young Hwan Chang, Daniel M Zuckerman, Laura M Heiser
Single-cell morphodynamical trajectories enable prediction of gene expression accompanying cell state change. bioRxiv : the preprint server for biology (2024)
Brian S White, Aurélien de Reyniès, Aaron M Newman, Joshua J Waterfall, Andrew Lamb, Florent Petitprez, Yating Lin, Rongshan Yu, Martin E Guerrero-Gimenez, Sergii Domanskyi, Gianni Monaco, Verena Chung, Jineta Banerjee, Daniel S Derrick, Alberto Valdeolivas, Haojun Li, Xu Xiao, Shun Wang, Frank Zheng, Wenxian Yang, Carlos A Catania, Benjamin J Lang, Thomas J Bertus, Carlo Piermarocchi, Francesca Pia Caruso, Michele Ceccarelli, Thomas Yu, Xindi Guo, Julie Bletz, John Coller, Holden Terry Maecker, Caroline Duault, Vida Shokoohi, Shailja Patel, Joanna E Liliental, Stockard Simon, null null, Julio Saez-Rodriguez, Laura M Heiser, Justin Guinney, Andrew J Gentles
Community assessment of methods to deconvolve cellular composition from bulk gene expression. Nature communications 15 (1) (2024)
Brian S White, Aurélien de Reyniès, Aaron M Newman, Joshua J Waterfall, Andrew Lamb, Florent Petitprez, Yating Lin, Rongshan Yu, Martin E Guerrero-Gimenez, Sergii Domanskyi, Gianni Monaco, Verena Chung, Jineta Banerjee, Daniel S Derrick, Alberto Valdeolivas, Haojun Li, Xu Xiao, Shun Wang, Frank Zheng, Wenxian Yang, Carlos A Catania, Benjamin J Lang, Thomas J Bertus, Carlo Piermarocchi, Francesca Pia Caruso, Michele Ceccarelli, Thomas Yu, Xindi Guo, Julie Bletz, John Coller, Holden Terry Maecker, Caroline Duault, Vida Shokoohi, Shailja Patel, Joanna E Liliental, Stockard Simon, null null, Julio Saez-Rodriguez, Laura M Heiser, Justin Guinney, Andrew J Gentles
Community assessment of methods to deconvolve cellular composition from bulk gene expression. Nature communications 15 (1) (2024)
Jeremy Copperman, Ian C McLean, Sean M Gross, Young Hwan Chang, Daniel M Zuckerman, Laura M Heiser
Single-cell morphodynamical trajectories enable prediction of gene expression accompanying cell state change. bioRxiv : the preprint server for biology (2024)
Jeremy Copperman, Sean M Gross, Young Hwan Chang, Laura M Heiser, Daniel M Zuckerman
Morphodynamical cell state description via live-cell imaging trajectory embedding. Communications biology 6 (1) (2023)
Jeanette A I Johnson, Genevieve L Stein-O'Brien, Max Booth, Randy Heiland, Furkan Kurtoglu, Daniel R Bergman, Elmar Bucher, Atul Deshpande, André Forjaz, Michael Getz, Ines Godet, Melissa R Lyman, John Metzcar, Jacob T Mitchell, Andrew D Raddatz, Heber L Rocha, Jacobo Solorzano, Aneequa Sundus, Yafei Wang, Daniele M Gilkes, Luciane Tsukamoto Kagohara, Ashley L Kiemen, Elizabeth D Thompson, Denis Wirtz, Pei-Hsun Wu, Neeha Zaidi, Lei Zheng, Jacquelyn W Zimmerman, Elizabeth D Thompson, Young Hwan Chang, Lisa M Coussens, Joe W Gray, Laura M Heiser, Elana J Fertig, Paul Macklin
Digitize your Biology! Modeling multicellular systems through interpretable cell behavior. bioRxiv : the preprint server for biology (2023)
Zinab O Doha, Xiaoyan Wang, Nicholas L Calistri, Jennifer Eng, Colin J Daniel, Luke Ternes, Eun Na Kim, Carl Pelz, Michael Munks, Courtney Betts, Sunjong Kwon, Elmar Bucher, Xi Li, Trent Waugh, Zuzana Tatarova, Dylan Blumberg, Aaron Ko, Nell Kirchberger, Jennifer A Pietenpol, Melinda E Sanders, Ellen M Langer, Mu-Shui Dai, Gordon B Mills, Koei Chin, Young Hwan Chang, Lisa M Coussens, Joe W Gray, Laura M Heiser, Rosalie C Sears
MYC Deregulation and PTEN Loss Model Tumor and Stromal Heterogeneity of Aggressive Triple-Negative Breast Cancer. Nature communications 14 (1) (2023)
Cemal Erdem, Sean M Gross, Laura M Heiser, Marc R Birtwistle
MOBILE pipeline enables identification of context-specific networks and regulatory mechanisms. Nature communications 14 (1) (2023)
Jeremy Copperman, Sean M Gross, Young Hwan Chang, Laura M Heiser, Daniel M Zuckerman
Morphodynamical cell state description via live-cell imaging trajectory embedding. Communications biology 6 (1) (2023)
Jeremy Copperman, Sean M Gross, Young Hwan Chang, Laura M Heiser, Daniel M Zuckerman
Morphodynamical cell state description via live-cell imaging trajectory embedding. Communications biology 6 (1) (2023)
Jeremy Copperman, Sean M Gross, Young Hwan Chang, Laura M Heiser, Daniel M Zuckerman
Morphodynamical cell state description via live-cell imaging trajectory embedding. Communications biology 6 (1) (2023)
Jeremy Copperman, Sean M Gross, Young Hwan Chang, Laura M Heiser, Daniel M Zuckerman
Morphodynamical cell state description via live-cell imaging trajectory embedding. Communications biology 6 (1) (2023)
Sean M Gross, Farnaz Mohammadi, Crystal Sanchez-Aguila, Paulina J Zhan, Tiera A Liby, Mark A Dane, Aaron S Meyer, Laura M Heiser
Analysis and modeling of cancer drug responses using cell cycle phase-specific rate effects. Nature communications 14 (1) (2023)
Cemal Erdem, Arnab Mutsuddy, Ethan M Bensman, William B Dodd, Michael M Saint-Antoine, Mehdi Bouhaddou, Robert C Blake, Sean M Gross, Laura M Heiser, Frank Alex Feltus, Marc R Birtwistle
A scalable, open-source implementation of a large-scale mechanistic model for single cell proliferation and death signaling. Nature communications 13 (1) (2022)
Farnaz Mohammadi, Shakthi Visagan, Sean M Gross, Luka Karginov, J C Lagarde, Laura M Heiser, Aaron S Meyer
A lineage tree-based hidden Markov model quantifies cellular heterogeneity and plasticity. Communications biology 5 (1) (2022)
Ramona Luna, Daniel P Heineck, Elmar Bucher, Laura M Heiser, Stuart D Ibsen
Theoretical and experimental analysis of negative dielectrophoresis-induced particle trajectories. Electrophoresis 43 (12) (2022)
Zuzana Tatarova, Dylan C Blumberg, James E Korkola, Laura M Heiser, John L Muschler, Pepper J Schedin, Sebastian W Ahn, Gordon B Mills, Lisa M Coussens, Oliver Jonas, Joe W Gray
A multiplex implantable microdevice assay identifies synergistic combinations of cancer immunotherapies and conventional drugs. Nature biotechnology (2022)
Luke Ternes, Mark A Dane, Sean Gross, Marilyne Labrie, Gordon Mills, Joe Gray, Laura M Heiser, Young Hwan Chang
A multi-encoder variational autoencoder controls multiple transformational features in single-cell image analysis. Communications biology 5 (1) (2022)
Sean M Gross, Mark A Dane, Rebecca L Smith, Kaylyn L Devlin, Ian C McLean, Daniel S Derrick, Caitlin E Mills, Kartik Subramanian, Alexandra B London, Denis Torre, John Erol Evangelista, Daniel J B Clarke, Zhuorui Xie, Cemal Erdem, Nicholas Lyons, Ted Natoli, Sarah Pessa, Xiaodong Lu, James Mullahoo, Jonathan Li, Miriam Adam, Brook Wassie, Moqing Liu, David F Kilburn, Tiera A Liby, Elmar Bucher, Crystal Sanchez-Aguila, Kenneth Daily, Larsson Omberg, Yunguan Wang, Connor Jacobson, Clarence Yapp, Mirra Chung, Dusica Vidovic, Yiling Lu, Stephan C Schürer, Albert Lee, Ajay Pillai, Aravind Subramanian, Malvina Papanastasiou, Ernest Fraenkel, Heidi S Feiler, Gordon B Mills, Jacob D Jaffe, Avi Ma'ayan, Marc R Birtwistle, Peter Karl Sorger, James E Korkola, Joe W Gray, Laura M Heiser
A multi-omic analysis of MCF10A cells provides a resource for integrative assessment of ligand-mediated molecular and phenotypic responses. Communications biology 5 (1) (2022)
Gregory J Kimmel, Mark A Dane, Laura M Heiser, Philipp M Altrock, Noemi Andor
Integrating Mathematical Modeling with High-Throughput Imaging Explains How Polyploid Populations Behave in Nutrient-Sparse Environments. Cancer research 80 (22) (2020)
Vidyalakshmi Sethunath, Huizhong Hu, Carmine De Angelis, Jamunarani Veeraraghavan, Lanfang Qin, Nicholas Wang, Lukas M Simon, Xiaoyong Fu, Agostina Nardone, Resel Pereira, Sarmistha Nanda, Malachi Griffith, Anna Tsimelzon, Chad Shaw, Gary C Chamness, Jorge S Reis-Filho, Britta Weigelt, Laura M Heiser, Susan G Hilsenbeck, Shixia Huang, Mothaffar F Rimawi, Joe W Gray, C Kent Osborne, Rachel Schiff
Targeting the Mevalonate Pathway to Overcome Acquired Anti-HER2 Treatment Resistance in Breast Cancer. Molecular cancer research : MCR 17 (11) (2019)
Daniel J Coleman, Lina Gao, Jacob Schwartzman, James E Korkola, David Sampson, Daniel S Derrick, Joshua Urrutia, Ariel Balter, Julja Burchard, Carly J King, Kami E Chiotti, Laura M Heiser, Joshi J Alumkal
Maintenance of MYC expression promotes de novo resistance to BET bromodomain inhibition in castration-resistant prostate cancer. Scientific reports 9 (1) (2019)
Daniel J Coleman, Lina Gao, Carly J King, Jacob A Schwartzman, Joshua A Urrutia, Archana Sehrawat, Junior Tayou, Ariel Balter, Julja Burchard, Kami E Chiotti, Daniel S Derrick, Duanchen Sun, Zheng Xia, Laura M Heiser, Joshi J Alumkal
BET bromodomain inhibition blocks the function of a critical AR-independent master regulator network in lethal prostate cancer. Oncogene 38 (28) (2019)
Elmar Bucher, Cheryl J Claunch, Derrick Hee, Rebecca L Smith, Kaylyn Devlin, Wallace Thompson, James E Korkola, Laura M Heiser
Annot: a Django-based sample, reagent, and experiment metadata tracking system. BMC bioinformatics 20 (1) (2019)