Christian Diener

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 29

Top Venues

bioRxiv : the preprint server for biology

BMC biology

Nature microbiology

Nature communications

Institute for Systems Biology

Max Planck Institute for Molecular Genetics (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Institute for Systems Biology Aug 01 2018

United States

Postdoctoral Research Fellow :: Gibbons Lab

Instituto Nacional de Medicina Genómica Jun 15 2015 - Jun 15 2018

Mexico

Postdoc :: Computational Genomics

Universidad Nacional Autónoma de México Dec 15 2012 - Dec 31 2014

Mexico

Postdoc :: Instituto de Fisiología Celular

Education History

Max Planck Institute for Molecular Genetics Oct 01 2008 - Dec 12 2012

Germany

PHD :: IMPRS

Publications

Nick Quinn-Bohmann, Tomasz Wilmanski, Katherine Ramos Sarmiento, Lisa Levy, Johanna W Lampe, Thomas Gurry, Noa Rappaport, Erin M Ostrem, Ophelia S Venturelli, Christian Diener, Sean M Gibbons
Microbial community-scale metabolic modelling predicts personalized short-chain fatty acid production profiles in the human gut. Nature microbiology 9 (7) (2024)
Jordy Evan Sulaiman, Jaron Thompson, Yili Qian, Eugenio I Vivas, Christian Diener, Sean M Gibbons, Nasia Safdar, Ophelia S Venturelli
Elucidating human gut microbiota interactions that robustly inhibit diverse Clostridioides difficile strains across different nutrient landscapes. bioRxiv : the preprint server for biology (2024)
Nick Quinn-Bohmann, Jose A Freixas-Coutin, Jin Seo, Ruth Simmons, Christian Diener, Sean M Gibbons
Meta-analysis of the human upper respiratory tract microbiome reveals robust taxonomic associations with health and disease. BMC biology 22 (1) (2024)
Christian Diener, Sean M Gibbons
Metagenomic estimation of dietary intake from human stool. bioRxiv : the preprint server for biology (2024)
Nick Quinn-Bohmann, Tomasz Wilmanski, Katherine Ramos Sarmiento, Lisa Levy, Johanna W Lampe, Thomas Gurry, Noa Rappaport, Erin M Ostrem, Ophelia S Venturelli, Christian Diener, Sean M Gibbons
Microbial community-scale metabolic modelling predicts personalized short-chain fatty acid production profiles in the human gut. Nature microbiology 9 (7) (2024)
Christian Diener, Sean M Gibbons
Metagenomic estimation of dietary intake from human stool. bioRxiv : the preprint server for biology (2024)
Christian Diener, Sean M Gibbons
Metagenomic estimation of dietary intake from human stool. bioRxiv : the preprint server for biology (2024)
Nick Quinn-Bohmann, Tomasz Wilmanski, Katherine Ramos Sarmiento, Lisa Levy, Johanna W Lampe, Thomas Gurry, Noa Rappaport, Erin M Ostrem, Ophelia S Venturelli, Christian Diener, Sean M Gibbons
Microbial community-scale metabolic modelling predicts personalized short-chain fatty acid production profiles in the human gut. Nature microbiology (2024)
Nick Quinn-Bohmann, Tomasz Wilmanski, Katherine Ramos Sarmiento, Lisa Levy, Johanna W Lampe, Thomas Gurry, Noa Rappaport, Erin M Ostrem, Ophelia S Venturelli, Christian Diener, Sean M Gibbons
Microbial community-scale metabolic modelling predicts personalized short-chain fatty acid production profiles in the human gut. Nature microbiology 9 (7) (2024)
Nick Quinn-Bohmann, Jose A Freixas-Coutin, Jin Seo, Ruth Simmons, Christian Diener, Sean M Gibbons
Meta-analysis of the human upper respiratory tract microbiome reveals robust taxonomic associations with health and disease. BMC biology 22 (1) (2024)
Nick Quinn-Bohmann, Jose A Freixas-Coutin, Jin Seo, Ruth Simmons, Christian Diener, Sean M Gibbons
Meta-analysis of the human upper respiratory tract microbiome reveals robust taxonomic associations with health and disease. BMC biology 22 (1) (2024)
Jordy Evan Sulaiman, Jaron Thompson, Yili Qian, Eugenio Vivas, Christian Diener, Sean M Gibbons, Nasia Safdar, Ophelia S Venturelli
Elucidating human gut microbiota interactions that robustly inhibit diverse Clostridioides difficile strains across different nutrient landscapes. bioRxiv : the preprint server for biology (2024)
Alice E Kane, Karthikeyani Chellappa, Michael B Schultz, Matthew Arnold, Jien Li, Joao Amorim, Christian Diener, Dantong Zhu, Sarah J Mitchell, Patrick Griffin, Xiao Tian, Christopher Petty, Ryan Conway, Katie Walsh, Lukas Shelerud, Charlotte Duesing, Amber L Mueller, Karlin Li, Maeve McNamara, Rafaella T Shima, James Mitchell, Michael S Bonkowski, Rafael de Cabo, Sean M Gibbons, Lindsay E Wu, Yuji Ikeno, Joseph A Baur, Luis Rajman, David A Sinclair
Long-term NMN treatment increases lifespan and healthspan in mice in a sex dependent manner. bioRxiv : the preprint server for biology (2024)
Nick Quinn-Bohmann, Jose A Freixas-Coutin, Jin Seo, Ruth Simmons, Christian Diener, Sean M Gibbons
Meta-analysis of the human upper respiratory tract microbiome reveals robust taxonomic associations with health and disease. BMC biology 22 (1) (2024)
Jordy Evan Sulaiman, Jaron Thompson, Yili Qian, Eugenio I Vivas, Christian Diener, Sean M Gibbons, Nasia Safdar, Ophelia S Venturelli
Elucidating human gut microbiota interactions that robustly inhibit diverse Clostridioides difficile strains across different nutrient landscapes. bioRxiv : the preprint server for biology (2024)
Alex Carr, Nitin S Baliga, Christian Diener, Sean M Gibbons
Personalized Clostridioides difficile engraftment risk prediction and probiotic therapy assessment in the human gut. bioRxiv : the preprint server for biology (2023)
Alex Carr, Nitin S Baliga, Christian Diener, Sean M Gibbons
Personalized Clostridioides difficile engraftment risk prediction and probiotic therapy assessment in the human gut. bioRxiv : the preprint server for biology (2023)
Nick Bohmann, Tomasz Wilmanski, Lisa Levy, Johanna W Lampe, Thomas Gurry, Noa Rappaport, Christian Diener, Sean M Gibbons
Microbial community-scale metabolic modeling predicts personalized short-chain-fatty-acid production profiles in the human gut. bioRxiv : the preprint server for biology (2023)
Nick Bohmann, Tomasz Wilmanski, Lisa Levy, Johanna W Lampe, Thomas Gurry, Noa Rappaport, Christian Diener, Sean M Gibbons
Microbial community-scale metabolic modeling predicts personalized short-chain-fatty-acid production profiles in the human gut. bioRxiv : the preprint server for biology (2023)
Christian Diener, Sean M Gibbons
More is Different: Metabolic Modeling of Diverse Microbial Communities. mSystems (2023)
Vanessa Rossetto Marcelino, Caitlin Welsh, Christian Diener, Emily L Gulliver, Emily L Rutten, Remy B Young, Edward M Giles, Sean M Gibbons, Chris Greening, Samuel C Forster
Disease-specific loss of microbial cross-feeding interactions in the human gut. Nature communications 14 (1) (2023)
Alex Carr, Nitin S Baliga, Christian Diener, Sean M Gibbons
Personalized Clostridioides difficile engraftment risk prediction and probiotic therapy assessment in the human gut. bioRxiv : the preprint server for biology (2023)
Katherine Ramos Sarmiento, Alex Carr, Christian Diener, Kenneth J Locey, Sean M Gibbons
Island biogeography theory and the gut: why taller people tend to harbor more diverse gut microbiomes. bioRxiv : the preprint server for biology (2023)
Joe L Lim, Christian Diener, James Wilson, Jacob J Valenzuela, Nitin S Baliga, Sean M Gibbons
Growth phase estimation for abundant bacterial populations sampled longitudinally from human stool metagenomes. Nature communications 14 (1) (2023)
James P Johnson, Christian Diener, Anne E Levine, Tomasz Wilmanski, David L Suskind, Alexandra Ralevski, Jennifer J Hadlock, Andrew T Magis, Leroy E Hood, Noa Rappaport, Sean M Gibbons
Generally-healthy individuals with aberrant bowel movement frequencies show enrichment for microbially-derived blood metabolites associated with impaired kidney function. bioRxiv : the preprint server for biology (2023)
Tomasz Wilmanski, Noa Rappaport, Christian Diener, Sean M Gibbons, Nathan D Price
From taxonomy to metabolic output: what factors define gut microbiome health? Gut microbes 13 (1) (2022)
Jessica A Day, Christian Diener, Anne E Otwell, Kourtney E Tams, Brad Bebout, Angela M Detweiler, Michael D Lee, Madeline T Scott, Wilson Ta, Monica Ha, Shienna A Carreon, Kenny Tong, Abdirizak A Ali, Sean M Gibbons, Nitin S Baliga
Lettuce (Lactuca sativa) productivity influenced by microbial inocula under nitrogen-limited conditions in aquaponics. PloS one 16 (2) (2021)
Christian Diener, Sean M Gibbons, Resendis-Antonio Osbaldo
MICOM: Metagenome-Scale Modeling To Infer Metabolic Interactions in the Gut Microbiota. mSystems 5 (1) (2020)
Evan Bolyen, Jai Ram Rideout, Matthew R Dillon, Nicholas A Bokulich, Christian C Abnet, Gabriel A Al-Ghalith, Harriet Alexander, Eric John Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E Bisanz, Kyle Bittinger, Asker Brejnrod, Colin J Brislawn, C Titus Brown, Benjamin J Callahan, Andrés Mauricio Caraballo-Rodriguez, John Chase, Emily K Cope, Ricardo Da Silva, Christian Diener, Pieter C Dorrestein, Gavin M Douglas, Daniel M Durall, Claire Duvallet, Christian F Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M Gauglitz, Sean M Gibbons, Deanna L Gibson, Antonio Gonzalez, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan P Holmes, Hannes Holste, Curtis Huttenhower, Gavin A Huttley, Stefan Janssen, Alan K Jarmusch, Lingjing Jiang, Benjamin D Kaehler, Kyo-Bin Kang, Christopher R Keefe, Paul Keim, Scott T Kelley, Dan Knights, Irina Koester, Tomasz Kosciolek, Jorden Kreps, Morgan G I Langille, Joslynn Lee, Ruth Ley, Yong-Xin Liu, Erikka Loftfield, Catherine A Lozupone, Massoud Maher, Clarisse A Marotz, Bryan D Martin, Daniel McDonald, Lauren J McIver, Alexey V Melnik, Jessica L Metcalf, Sydney C Morgan, Jamie T Morton, Ahmad Turan Naimey, Jose A Navas-Molina, Louis Felix Nothias, Stephanie B Orchanian, Talima R Pearson, Samuel L Peoples, Daniel Petras, Mary Lai Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R Rivers, Michael Scott Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R Spear, Austin D Swafford, Luke R Thompson, Pedro J Torres, Pauline Trinh, Anupriya Tripathi, Peter J Turnbaugh, Sabah Ul-Hasan, Justin Johan Jozias van der Hooft, Fernando Vargas, Yoshiki Vázquez-Baeza, Emily Vogtmann, Max von Hippel, William Walters, Yunhu Wan, Mingxun Wang, Jonathan Warren, Kyle C Weber, Charles H D Williamson, Amy D Willis, Zhenjiang Zech Xu, Jesse R Zaneveld, Yilong Zhang, Qiyun Zhu, Rob Knight, J Gregory Caporaso
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nature biotechnology 37 (8) (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Christian Diener