Andrés Mauricio Caraballo-Rodriguez (Andrés M Caraballo-Rodríguez, A M Caraballo-Rodríguez, Andrés Mauricio Caraballo-Rodríguez, Andres Mauricio Caraballo-Rodriguez)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 21

Top Venues

mSystems

Nature communications

bioRxiv : the preprint server for biology

Nature biotechnology

University of California San Diego

Universidade de São Paulo Faculdade de Ciências Farmacêuticas de Ribeirão Preto (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California San Diego Aug 01 2017

United States

Postdoctoral Researcher :: Skaggs School of Pharmacy and Pharmaceutical Sciences

Education History

Universidade de São Paulo Faculdade de Ciências Farmacêuticas de Ribeirão Preto - Feb 10 2017

Brazil

PHD :: Ciências Farmacêuticas

Universidade de São Paulo Faculdade de Ciências Farmacêuticas de Ribeirão Preto - Feb 22 2013

Brazil

MSC :: Ciências Farmacêuticas

Universidad Nacional de Colombia - Feb 15 2011

Colombia

MSC :: Facultad de Derecho, Ciencias Políticas y Sociales

Publications

Cassandra Tang-Wing, Ipsita Mohanty, MacKenzie Bryant, Katherine Makowski, Daira Melendez, Pieter C Dorrestein, Rob Knight, Andrés Mauricio Caraballo-Rodriguez, Celeste Allaband, Keith Jenné
Impact of diet change on the gut microbiome of common marmosets ( Callithrix jacchus ). mSystems (2024)
Paulo Wender Portal Gomes, Helena M Russo, Robin Schmid, Simone Zuffa, Tito Damiani, Luis-Manuel Quiros-Guerrero, Andrés Mauricio Caraballo-Rodriguez, Haoqi Nina Zhao, Heejung Yang, Shipei Xing, Vincent Charron-Lamoureux, Desnor N Chigumba, Brian E Sedio, Jonathan A Myers, Pierre-Marie Allard, Thomas V Harwood, Giselle Tamayo-Castillo, Kyo-Bin Kang, Emmanuel Defossez, Hector Henrique Ferreira Koolen, Milton Nascimento da Silva, Consuelo Yumiko Yoshioka E Silva, Sergio Rasmann, Tom W N Walker, Gaëtan Glauser, José Miguel Chaves-Fallas, Bruno David, Hyun Woo Kim, Kyu Hyeong Lee, Myeong Ji Kim, Won Jun Choi, Young-Sam Keum, Emilly J S P de Lima, Lívia Soman de Medeiros Medeiros, Giovana A Bataglion, Emmanoel V Costa, Felipe Moura Araújo da Silva, Alice Rhelly V Carvalho, José Diogo E Reis, Sônia Pamplona, Eunah Jeong, Kyungha Lee, Geum Jin Kim, Yun-Seo Kil, Joo-Won Nam, Hyukjae Choi, Yoo Kyong Han, Si Young Park, Ki Yong Lee, Changling Hu, Yilun Dong, Shengmin Sang, Colin R Morrison, Ricardo Moreira Borges, Andrew Magno Teixeira, Seo Yoon Lee, Bum Soo Lee, Se Yun Jeong, Ki Hyun Kim, Adriano Rutz, Arnaud Gaudry, Edouard Bruelhart, Iris F Kappers, Rumyana Karlova, Mara Meisenburg, Roland Berdaguer, J Sebastián Tello, David Henderson, Leslie Cayola, S Joseph Wright, David N Allen, Kristina J Anderson-Teixeira, Jennifer L Baltzer, James A Lutz, Sean M McMahon, Geoffrey G Parker, John D Parker, Trent R Northen, Benjamin P Bowen, Tomáš Pluskal, Justin Johan Jozias van der Hooft, Jeremy J Carver, Nuno Bandeira, Benjamin S Pullman, Jean-Luc Wolfender, Roland D Kersten, Mingxun Wang, Pieter C Dorrestein
plantMASST - Community-driven chemotaxonomic digitization of plants. bioRxiv : the preprint server for biology (2024)
Cassandra Tang-Wing, Ipsita Mohanty, MacKenzie Bryant, Katherine Makowski, Daira Melendez, Pieter C Dorrestein, Rob Knight, Andrés Mauricio Caraballo-Rodriguez, Celeste Allaband, Keith Jenné
Impact of diet change on the gut microbiome of common marmosets ( Callithrix jacchus ). mSystems 9 (8) (2024)
Paulo Wender Portal Gomes, Helena M Russo, Robin Schmid, Simone Zuffa, Tito Damiani, Luis-Manuel Quiros-Guerrero, Andrés Mauricio Caraballo-Rodriguez, Haoqi Nina Zhao, Heejung Yang, Shipei Xing, Vincent Charron-Lamoureux, Desnor N Chigumba, Brian E Sedio, Jonathan A Myers, Pierre-Marie Allard, Thomas V Harwood, Giselle Tamayo-Castillo, Kyo-Bin Kang, Emmanuel Defossez, Hector Henrique Ferreira Koolen, Milton Nascimento da Silva, Consuelo Yumiko Yoshioka E Silva, Sergio Rasmann, Tom W N Walker, Gaëtan Glauser, José Miguel Chaves-Fallas, Bruno David, Hyun Woo Kim, Kyu Hyeong Lee, Myeong Ji Kim, Won Jun Choi, Young-Sam Keum, Emilly J S P de Lima, Lívia Soman de Medeiros Medeiros, Giovana A Bataglion, Emmanoel V Costa, Felipe Moura Araújo da Silva, Alice Rhelly V Carvalho, José Diogo E Reis, Sônia Pamplona, Eunah Jeong, Kyungha Lee, Geum Jin Kim, Yun-Seo Kil, Joo-Won Nam, Hyukjae Choi, Yoo Kyong Han, Si Young Park, Ki Yong Lee, Changling Hu, Yilun Dong, Shengmin Sang, Colin R Morrison, Ricardo Moreira Borges, Andrew Magno Teixeira, Seo Yoon Lee, Bum Soo Lee, Se Yun Jeong, Ki Hyun Kim, Adriano Rutz, Arnaud Gaudry, Edouard Bruelhart, Iris F Kappers, Rumyana Karlova, Mara Meisenburg, Roland Berdaguer, J Sebastián Tello, David Henderson, Leslie Cayola, S Joseph Wright, David N Allen, Kristina J Anderson-Teixeira, Jennifer L Baltzer, James A Lutz, Sean M McMahon, Geoffrey G Parker, John D Parker, Trent R Northen, Benjamin P Bowen, Tomáš Pluskal, Justin Johan Jozias van der Hooft, Jeremy J Carver, Nuno Bandeira, Benjamin S Pullman, Jean-Luc Wolfender, Roland D Kersten, Mingxun Wang, Pieter C Dorrestein
plantMASST - Community-driven chemotaxonomic digitization of plants. bioRxiv : the preprint server for biology (2024)
Cassandra Tang-Wing, Ipsita Mohanty, MacKenzie Bryant, Katherine Makowski, Daira Melendez, Pieter C Dorrestein, Rob Knight, Andrés Mauricio Caraballo-Rodriguez, Celeste Allaband, Keith Jenné
Impact of diet change on the gut microbiome of common marmosets ( Callithrix jacchus ). mSystems 9 (8) (2024)
Paulo Wender Portal Gomes, Helena M Russo, Robin Schmid, Simone Zuffa, Tito Damiani, Luis-Manuel Quiros-Guerrero, Andrés Mauricio Caraballo-Rodriguez, Haoqi Nina Zhao, Heejung Yang, Shipei Xing, Vincent Charron-Lamoureux, Desnor N Chigumba, Brian E Sedio, Jonathan A Myers, Pierre-Marie Allard, Thomas V Harwood, Giselle Tamayo-Castillo, Kyo-Bin Kang, Emmanuel Defossez, Hector Henrique Ferreira Koolen, Milton Nascimento da Silva, Consuelo Yumiko Yoshioka E Silva, Sergio Rasmann, Tom W N Walker, Gaëtan Glauser, José Miguel Chaves-Fallas, Bruno David, Hyun Woo Kim, Kyu Hyeong Lee, Myeong Ji Kim, Won Jun Choi, Young-Sam Keum, Emilly J S P de Lima, Lívia Soman de Medeiros Medeiros, Giovana A Bataglion, Emmanoel V Costa, Felipe Moura Araújo da Silva, Alice Rhelly V Carvalho, José Diogo E Reis, Sônia Pamplona, Eunah Jeong, Kyungha Lee, Geum Jin Kim, Yun-Seo Kil, Joo-Won Nam, Hyukjae Choi, Yoo Kyong Han, Si Young Park, Ki Yong Lee, Changling Hu, Yilun Dong, Shengmin Sang, Colin R Morrison, Ricardo Moreira Borges, Andrew Magno Teixeira, Seo Yoon Lee, Bum Soo Lee, Se Yun Jeong, Ki Hyun Kim, Adriano Rutz, Arnaud Gaudry, Edouard Bruelhart, Iris F Kappers, Rumyana Karlova, Mara Meisenburg, Roland Berdaguer, J Sebastián Tello, David Henderson, Leslie Cayola, S Joseph Wright, David N Allen, Kristina J Anderson-Teixeira, Jennifer L Baltzer, James A Lutz, Sean M McMahon, Geoffrey G Parker, John D Parker, Trent R Northen, Benjamin P Bowen, Tomáš Pluskal, Justin Johan Jozias van der Hooft, Jeremy J Carver, Nuno Bandeira, Benjamin S Pullman, Jean-Luc Wolfender, Roland D Kersten, Mingxun Wang, Pieter C Dorrestein
plantMASST - Community-driven chemotaxonomic digitization of plants. bioRxiv : the preprint server for biology (2024)
Cassandra Tang-Wing, Ipsita Mohanty, MacKenzie Bryant, Katherine Makowski, Daira Melendez, Pieter C Dorrestein, Rob Knight, Andrés Mauricio Caraballo-Rodriguez, Celeste Allaband, Keith Jenné
Impact of diet change on the gut microbiome of common marmosets ( Callithrix jacchus ). mSystems 9 (8) (2024)
Kathleen E Kyle, Sara P Puckett, Andrés Mauricio Caraballo-Rodriguez, José Rivera-Chávez, Robert M Samples, Cody E Earp, Huzefa A Raja, Cedric J Pearce, Madeleine Ernst, Justin Johan Jozias van der Hooft, Madison E Adams, Nicholas H Oberliels, Pieter C Dorrestein, Jonathan L Klassen, Marcy J Balunas
Trachymyrmex septentrionalis ants promote fungus garden hygiene using Trichoderma -derived metabolite cues. Proceedings of the National Academy of Sciences of the United States of America 120 (25) (2023)
María Victoria Berlanga-Clavero, Carlos Molina-Santiago, Andrés Mauricio Caraballo-Rodriguez, Daniel Petras, L Díaz-Martínez, A Pérez-García, Antonio de Vicente, V J Carrión, Pieter C Dorrestein, Diego Romero
Bacillus subtilis biofilm matrix components target seed oil bodies to promote growth and anti-fungal resistance in melon. Nature microbiology 7 (7) (2022)
Alexander A Aksenov, Rodolfo A Salido, Alexey V Melnik, Caitriona Brennan, Asker Brejnrod, Andrés Mauricio Caraballo-Rodriguez, Julia M Gauglitz, Franck Lejzerowicz, Delphine K Farmer, Marina E Vance, Rob Knight, Pieter C Dorrestein
The molecular impact of life in an indoor environment. Science advances 8 (25) (2022)
Bahar Behsaz, Edna Bode, Alexey Gurevich, Yan-Ni Shi, Florian Grundmann, Deepa Acharya, Andrés Mauricio Caraballo-Rodriguez, Amina Bouslimani, Morgan Panitchpakdi, Annabell Linck, Changhui Guan, Julia Oh, Pieter C Dorrestein, Helge B Bode, Pavel A Pevzner, Hosein Mohimani
Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery. Nature communications 12 (1) (2021)
Bahar Behsaz, Edna Bode, Alexey Gurevich, Yan-Ni Shi, Florian Grundmann, Deepa Acharya, Andrés Mauricio Caraballo-Rodriguez, Amina Bouslimani, Morgan Panitchpakdi, Annabell Linck, Changhui Guan, Julia Oh, Pieter C Dorrestein, Helge B Bode, Pavel A Pevzner, Hosein Mohimani
Publisher Correction: Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery. Nature communications 12 (1) (2021)
Olga Kunyavskaya, Azat M Tagirdzhanov, Andrés Mauricio Caraballo-Rodriguez, Louis-Felix Nothias, Pieter C Dorrestein, Anton Korobeynikov, Hosein Mohimani, Alexey Gurevich
Nerpa: A Tool for Discovering Biosynthetic Gene Clusters of Bacterial Nonribosomal Peptides. Metabolites 11 (10) (2021)
Mingxun Wang, Alan K Jarmusch, Fernando Vargas, Alexander A Aksenov, Julia M Gauglitz, Kelly C Weldon, Daniel Petras, Ricardo da Silva, Robert Quinn, Alexey V Melnik, Justin Johan Jozias van der Hooft, Andrés Mauricio Caraballo-Rodriguez, Louis Felix Nothias, Christine M Aceves, Morgan Panitchpakdi, Elizabeth Brown, Francesca Di Ottavio, Nicole Sikora, Emmanuel O Elijah, Lara Labarta-Bajo, Emily C Gentry, Shabnam Shalapour, Kathleen E Kyle, Sara P Puckett, Jeramie D Watrous, Carolina S Carpenter, Amina Bouslimani, Madeleine Ernst, Austin D Swafford, Elina I Zúñiga, Marcy J Balunas, Jonathan L Klassen, Rohit Loomba, Rob Knight, Nuno Bandeira, Pieter C Dorrestein
Mass spectrometry searches using MASST. Nature biotechnology 38 (1) (2020)
Allegra T Aron, Emily C Gentry, Kerry L McPhail, Louis-Félix Nothias, Mélissa Nothias-Esposito, Amina Bouslimani, Daniel Petras, Julia M Gauglitz, Nicole Sikora, Fernando Vargas, Justin Johan Jozias van der Hooft, Madeleine Ernst, Kyo-Bin Kang, Christine M Aceves, Andrés Mauricio Caraballo-Rodriguez, Irina Koester, Kelly C Weldon, Samuel Bertrand, Catherine Roullier, Kunyang Sun, Richard M Tehan, Cristopher A Boya P, Martin H Christian, Marcelino Gutiérrez, Aldo Moreno Ulloa, Javier Andres Tejeda Mora, Randy Mojica-Flores, Johant Lakey-Beitia, Victor Vásquez-Chaves, Yilue Zhang, Angela I Calderón, Nicole M Tayler, Robert A Keyzers, Fidele Tugizimana, Nombuso Ndlovu, Alexander A Aksenov, Alan K Jarmusch, Robin Schmid, Andrew W Truman, Nuno Bandeira, Mingxun Wang, Pieter C Dorrestein
Reproducible molecular networking of untargeted mass spectrometry data using GNPS. Nature protocols 15 (6) (2020)
Louis-Félix Nothias, Daniel Petras, Robin Schmid, Kai Dührkop, Johannes Rainer, Abinesh Sarvepalli, Ivan Protsyuk, Madeleine Ernst, Hiroshi Tsugawa, Markus Fleischauer, Fabian Aicheler, Alexander A Aksenov, Oliver Alka, Pierre-Marie Allard, Aiko Barsch, Xavier Cachet, Andrés Mauricio Caraballo-Rodriguez, Ricardo R Da Silva, Tam Dang, Neha Garg, Julia M Gauglitz, Alexey Gurevich, Giorgis Isaac, Alan K Jarmusch, Zdeněk Kameník, Kyo-Bin Kang, Nikolas Kessler, Irina Koester, Ansgar Korf, Audrey Le Gouëllec, Marcus Ludwig, Christian Martin H, Laura-Isobel McCall, Jonathan McSayles, Sven W Meyer, Hosein Mohimani, Mustafa Morsy, Oriane Moyne, Steffen Neumann, Heiko Neuweger, Ngoc Hung Nguyen, Melissa Nothias-Esposito, Julien Paolini, Vanessa V Phelan, Tomáš Pluskal, Robert A Quinn, Simon Rogers, Bindesh Shrestha, Anupriya Tripathi, Justin Johan Jozias van der Hooft, Fernando Vargas, Kelly C Weldon, Michael Witting, Heejung Yang, Zheng Zhang, Florian Zubeil, Oliver Kohlbacher, Sebastian Böcker, Theodore Alexandrov, Nuno Bandeira, Mingxun Wang, Pieter C Dorrestein
Feature-based molecular networking in the GNPS analysis environment. Nature methods 17 (9) (2020)
Fernando Vargas, Kelly C Weldon, Nicole Sikora, Mingxun Wang, Zheng Zhang, Emily C Gentry, Morgan W Panitchpakdi, Andrés Mauricio Caraballo-Rodriguez, Pieter C Dorrestein, Alan K Jarmusch
Protocol for community-created public MS/MS reference spectra within the Global Natural Products Social Molecular Networking infrastructure. Rapid communications in mass spectrometry : RCM 34 (10) (2020)
Evan Bolyen, Jai Ram Rideout, Matthew R Dillon, Nicholas A Bokulich, Christian C Abnet, Gabriel A Al-Ghalith, Harriet Alexander, Eric John Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E Bisanz, Kyle Bittinger, Asker Brejnrod, Colin J Brislawn, C Titus Brown, Benjamin J Callahan, Andrés Mauricio Caraballo-Rodriguez, John Chase, Emily K Cope, Ricardo Da Silva, Christian Diener, Pieter C Dorrestein, Gavin M Douglas, Daniel M Durall, Claire Duvallet, Christian F Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M Gauglitz, Sean M Gibbons, Deanna L Gibson, Antonio Gonzalez, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan P Holmes, Hannes Holste, Curtis Huttenhower, Gavin A Huttley, Stefan Janssen, Alan K Jarmusch, Lingjing Jiang, Benjamin D Kaehler, Kyo-Bin Kang, Christopher R Keefe, Paul Keim, Scott T Kelley, Dan Knights, Irina Koester, Tomasz Kosciolek, Jorden Kreps, Morgan G I Langille, Joslynn Lee, Ruth Ley, Yong-Xin Liu, Erikka Loftfield, Catherine A Lozupone, Massoud Maher, Clarisse A Marotz, Bryan D Martin, Daniel McDonald, Lauren J McIver, Alexey V Melnik, Jessica L Metcalf, Sydney C Morgan, Jamie T Morton, Ahmad Turan Naimey, Jose A Navas-Molina, Louis Felix Nothias, Stephanie B Orchanian, Talima R Pearson, Samuel L Peoples, Daniel Petras, Mary Lai Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R Rivers, Michael Scott Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R Spear, Austin D Swafford, Luke R Thompson, Pedro J Torres, Pauline Trinh, Anupriya Tripathi, Peter J Turnbaugh, Sabah Ul-Hasan, Justin Johan Jozias van der Hooft, Fernando Vargas, Yoshiki Vázquez-Baeza, Emily Vogtmann, Max von Hippel, William Walters, Yunhu Wan, Mingxun Wang, Jonathan Warren, Kyle C Weber, Charles H D Williamson, Amy D Willis, Zhenjiang Zech Xu, Jesse R Zaneveld, Yilong Zhang, Qiyun Zhu, Rob Knight, J Gregory Caporaso
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nature biotechnology 37 (8) (2019)
Carlos Molina-Santiago, John R Pearson, Yurena Navarro, María Victoria Berlanga-Clavero, Andrés Mauricio Caraballo-Rodriguez, Daniel Petras, María Luisa García-Martín, Gaelle Lamon, Birgit Habenstein, Francisco M Cazorla, Antonio de Vicente, Antoine Loquet, Pieter C Dorrestein, Diego Romero
The extracellular matrix protects Bacillus subtilis colonies from Pseudomonas invasion and modulates plant co-colonization. Nature communications 10 (1) (2019)
Ricardo R da Silva, Mingxun Wang, Louis-Felix Nothias, Justin Johan Jozias van der Hooft, Andrés Mauricio Caraballo-Rodriguez, Evan Fox, Marcy J Balunas, Jonathan L Klassen, Norberto Peporine Lopes, Pieter C Dorrestein
Propagating annotations of molecular networks using in silico fragmentation. PLoS computational biology 14 (4) (2018)
Andrés Mauricio Caraballo-Rodriguez, Pieter C Dorrestein, Monica Tallarico Pupo
Molecular inter-kingdom interactions of endophytes isolated from Lychnophora ericoides. Scientific reports 7 (1) (2017)

Andrés Mauricio Caraballo-Rodriguez.css-eqlu8i{font-size:small;padding-left:4px;} (Andrés M Caraballo-Rodríguez, A M Caraballo-Rodríguez, Andrés Mauricio Caraballo-Rodríguez, Andres Mauricio Caraballo-Rodriguez)

Publication Activity (10 Years)

Top Topics

Top Venues

Andrés Mauricio Caraballo-Rodriguez (Andrés M Caraballo-Rodríguez, A M Caraballo-Rodríguez, Andrés Mauricio Caraballo-Rodríguez, Andres Mauricio Caraballo-Rodriguez)