Manimozhiyan Arumugam

ResearcherID Loop profile Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2013-2024
Publications (10 Years): 15

Top Venues

Nature biotechnology

Scientific reports

Nature medicine

Nature communications

University of Copenhagen

University of Nebraska-Lincoln (MSC)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Copenhagen Feb 01 2013

Denmark

Associate Professor :: Novo Nordisk Foundation Center for Basic Metabolic Research

European Molecular Biology Laboratory

Germany

Research Scientist :: Structural and Computational Biology

Washington University in Saint Louis

United States

Research Associate :: Computer Science and Engineering

Infosys Technologies Ltd Jul 01 1999

India

Software Engineer :: Internet Consulting Practice

Education History

University of Nebraska-Lincoln Aug 14 2000 - Jan 30 2012

United States

MSC :: Computer Science and Engineering

European Molecular Biology Laboratory Sep 01 2006 - May 31 2010

Germany

PHD :: Structural and Computational Biology

Publications

Evelina Stankevic, Timo Kern, Dmitrii Borisevich, Casper Sahl Poulsen, Anne Lundager Madsen, Tue Haldor Hansen, Anna Jonsson, Mikkel Schubert, Nikoline Nygaard, Trine Nielsen, Daniel Belstrøm, Tarunveer Singh Ahluwalia, Daniel R Witte, Niels Grarup, Manimozhiyan Arumugam, Oluf Pedersen, Torben Hansen
Genome-wide association study identifies host genetic variants influencing oral microbiota diversity and metabolic health. Scientific reports 14 (1) (2024)
Evelina Stankevic, Timo Kern, Dmitrii Borisevich, Casper Sahl Poulsen, Anne Lundager Madsen, Tue Haldor Hansen, Anna Jonsson, Mikkel Schubert, Nikoline Nygaard, Trine Nielsen, Daniel Belstrøm, Tarunveer Singh Ahluwalia, Daniel R Witte, Niels Grarup, Manimozhiyan Arumugam, Oluf Pedersen, Torben Hansen
Genome-wide association study identifies host genetic variants influencing oral microbiota diversity and metabolic health. Scientific reports 14 (1) (2024)
Evelina Stankevic, Timo Kern, Dmitrii Borisevich, Casper Sahl Poulsen, Anne Lundager Madsen, Tue Haldor Hansen, Anna Jonsson, Mikkel Schubert, Nikoline Nygaard, Trine Nielsen, Daniel Belstrøm, Tarunveer Singh Ahluwalia, Daniel R Witte, Niels Grarup, Manimozhiyan Arumugam, Oluf Pedersen, Torben Hansen
Genome-wide association study identifies host genetic variants influencing oral microbiota diversity and metabolic health. Scientific reports 14 (1) (2024)
Thiyagarajan Gnanasekaran, Arjun Sarathi, Qing Fang, Asieh Azarm, Juliana Assis Geraldo, Eleonora Nigro, Manimozhiyan Arumugam
Quantitative differences in synthetic gut microbial inoculums do not affect the final stabilized in vitro community compositions. mSystems (2023)
Mads Israelsen, Camila Alvarez-Silva, Bjørn Stæhr Madsen, Camilla Dalby Hansen, Nikolaj Christian Torp, Stine Johansen, Johanne Kragh Hansen, Katrine Prier Lindvig, Jeanlouis Insonere, Virginie Riviere, Helene Bæk Juel, Asker Brejnrod, Lars Juhl Jensen, Maja Thiele, Benjamin Lelouvier, Torben Hansen, Manimozhiyan Arumugam, Aleksander Krag, null null, null null
Impact of acute alcohol consumption on circulating microbiome in asymptomatic alcohol-related liver disease. Gut (2023)
Carmen Saenz, Qing Fang, Thiyagarajan Gnanasekaran, Samuel Addison Jack Trammell, Jesse Arnold Buijink, Paola Pisano, Michael Wierer, Frédéric Moens, Bettina Lengger, Asker Brejnrod, Manimozhiyan Arumugam
Clostridium scindens secretome suppresses virulence gene expression of Clostridioides difficile in a bile acid-independent manner. Microbiology spectrum (2023)
Lore Van Espen, Emilie Glad Bak, Leen Beller, Lila Close, Ward Deboutte, Helene Bæk Juel, Trine Nielsen, Deniz Sinar, Lander De Coninck, Christine Frithioff-Bøjsøe, Cilius Esmann Fonvig, Suganya Jacobsen, Maria Kjærgaard, Maja Thiele, Anthony Fullam, Michael Kuhn, Jens-Christian Holm, Peer Bork, Aleksander Krag, Torben Hansen, Manimozhiyan Arumugam, Jelle Matthijnssens
A Previously Undescribed Highly Prevalent Phage Identified in a Danish Enteric Virome Catalog. mSystems 6 (5) (2021)
Jonel Trebicka, Peer Bork, Aleksander Krag, Manimozhiyan Arumugam
Utilizing the gut microbiome in decompensated cirrhosis and acute-on-chronic liver failure. Nature reviews. Gastroenterology & hepatology 18 (3) (2020)
Michael Jakob Pichler, Chihaya Yamada, Bashar Shuoker, María Camila Alvarez-Silva, Aina Gotoh, Maria Louise Leth, Erwin Schoof, Toshihiko Katoh, Mikiyasu Sakanaka, Takane Katayama, Chunsheng Jin, Niclas G Karlsson, Manimozhiyan Arumugam, Shinya Fushinobu, Maher Abou Hachem
Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways. Nature communications 11 (1) (2020)
Jakob Wirbel, Paul-Theodor Pyl, Ece Kartal, Konrad Zych, Alireza Kashani, Alessio Milanese, Jonas S Fleck, Anita Y Voigt, Albert Palleja, Ruby Ponnudurai, Shinichi Sunagawa, Luis Pedro Coelho, Petra Schrotz-King, Emily Vogtmann, Nina Habermann, Emma Niméus, Andrew Maltez Thomas, Paolo Manghi, Sara Gandini, Davide Serrano, Sayaka Mizutani, Hirotsugu Shiroma, Satoshi Shiba, Tatsuhiro Shibata, Shinichi Yachida, Takuji Yamada, Levi Waldron, Alessio Naccarati, Nicola Segata, Rashmi Sinha, Cornelia M Ulrich, Hermann Brenner, Manimozhiyan Arumugam, Peer Bork, Georg Zeller
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer. Nature medicine 25 (4) (2019)
Evan Bolyen, Jai Ram Rideout, Matthew R Dillon, Nicholas A Bokulich, Christian C Abnet, Gabriel A Al-Ghalith, Harriet Alexander, Eric John Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E Bisanz, Kyle Bittinger, Asker Brejnrod, Colin J Brislawn, C Titus Brown, Benjamin J Callahan, Andrés Mauricio Caraballo-Rodriguez, John Chase, Emily K Cope, Ricardo Da Silva, Christian Diener, Pieter C Dorrestein, Gavin M Douglas, Daniel M Durall, Claire Duvallet, Christian F Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M Gauglitz, Sean M Gibbons, Deanna L Gibson, Antonio Gonzalez, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan P Holmes, Hannes Holste, Curtis Huttenhower, Gavin A Huttley, Stefan Janssen, Alan K Jarmusch, Lingjing Jiang, Benjamin D Kaehler, Kyo-Bin Kang, Christopher R Keefe, Paul Keim, Scott T Kelley, Dan Knights, Irina Koester, Tomasz Kosciolek, Jorden Kreps, Morgan G I Langille, Joslynn Lee, Ruth Ley, Yong-Xin Liu, Erikka Loftfield, Catherine A Lozupone, Massoud Maher, Clarisse A Marotz, Bryan D Martin, Daniel McDonald, Lauren J McIver, Alexey V Melnik, Jessica L Metcalf, Sydney C Morgan, Jamie T Morton, Ahmad Turan Naimey, Jose A Navas-Molina, Louis Felix Nothias, Stephanie B Orchanian, Talima R Pearson, Samuel L Peoples, Daniel Petras, Mary Lai Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R Rivers, Michael Scott Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R Spear, Austin D Swafford, Luke R Thompson, Pedro J Torres, Pauline Trinh, Anupriya Tripathi, Peter J Turnbaugh, Sabah Ul-Hasan, Justin Johan Jozias van der Hooft, Fernando Vargas, Yoshiki Vázquez-Baeza, Emily Vogtmann, Max von Hippel, William Walters, Yunhu Wan, Mingxun Wang, Jonathan Warren, Kyle C Weber, Charles H D Williamson, Amy D Willis, Zhenjiang Zech Xu, Jesse R Zaneveld, Yilong Zhang, Qiyun Zhu, Rob Knight, J Gregory Caporaso
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nature biotechnology 37 (8) (2019)
Andrew Maltez Thomas, Paolo Manghi, Francesco Asnicar, Edoardo Pasolli, Federica Armanini, Moreno Zolfo, Francesco Beghini, Serena Manara, Nicolai Karcher, Chiara Pozzi, Sara Gandini, Davide Serrano, Sonia Tarallo, Antonio Francavilla, Gaetano Gallo, Mario Trompetto, Giulio Ferrero, Sayaka Mizutani, Hirotsugu Shiroma, Satoshi Shiba, Tatsuhiro Shibata, Shinichi Yachida, Takuji Yamada, Jakob Wirbel, Petra Schrotz-King, Cornelia M Ulrich, Hermann Brenner, Manimozhiyan Arumugam, Peer Bork, Georg Zeller, Francesca Cordero, Emmanuel Dias-Neto, João Carlos Setubal, Adrian Tett, Barbara Pardini, Maria Rescigno, Levi Waldron, Alessio Naccarati, Nicola Segata
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation. Nature medicine 25 (4) (2019)
Alireza Kashani, Asker Daniel Brejnrod, Chunyu Jin, Timo Kern, Andreas Nygaard Madsen, Louise Aas Holm, Georg K Gerber, Jens-Christian Holm, Torben Hansen, Birgitte Holst, Manimozhiyan Arumugam
Impaired glucose metabolism and altered gut microbiome despite calorie restriction of ob/ob mice. Animal microbiome 1 (1) (2019)
Albert Palleja, Kristian H Mikkelsen, Sofia K Forslund, Alireza Kashani, Kristine H Allin, Trine Nielsen, Tue Haldor Hansen, Suisha Liang, Qiang Feng, Chenchen Zhang, Paul Theodor Pyl, Luis Pedro Coelho, Huanming Yang, Jian Wang, Athanasios Typas, Morten F Nielsen, Henrik Bjorn Nielsen, Peer Bork, Jun Wang, Tina Vilsbøll, Torben Hansen, Filip K Krag Knop, Manimozhiyan Arumugam, Oluf Pedersen
Recovery of gut microbiota of healthy adults following antibiotic exposure. Nature microbiology 3 (11) (2018)
Maria A Suvorova, Anna N Tsapieva, Emilie Glad Bak, Valery A Chereshnev, Ekaterina P Kiseleva, Alexander N Suvorov, Manimozhiyan Arumugam
Complete Genome Sequences of emm111 Type Streptococcus pyogenes Strain GUR, with Antitumor Activity, and Its Derivative Strain GURSA1 with an Inactivated emm Gene. Genome announcements 5 (38) (2017)
Qiang Feng, Suisha Liang, Huijue Jia, Andreas Stadlmayr, Longqing Tang, Zhou Lan, Dongya Zhang, Huihua Xia, Xiaoying Xu, Zhuye Jie, Lili Su, Xiaoping Li, Xin Li, Junhua Li, Liang Xiao, Ursula Huber-Schönauer, David Niederseer, Xun Xu, Jumana Yousuf Al-Aama, Huanming Yang, Jian Wang, Karsten Kristiansen, Manimozhiyan Arumugam, Herbert Tilg, Christian Datz, Jun Wang
Gut microbiome development along the colorectal adenoma-carcinoma sequence. Nature communications 6 (2015)
Liang Xiao, Qiang Feng, Suisha Liang, Si Brask Sonne, Zhongkui Xia, Xinmin Qiu, Xiaoping Li, Hua Long, Jianfeng Zhang, Dongya Zhang, Chuan Liu, Zhiwei Fang, Joyce Chou, Jacob Glanville, Qin Hao, Dorota Kotowska, Camilla Colding, Tine Rask Licht, Donghai Wu, Jun Yu, Joseph Jao Yiu Sung, Qiaoyi Liang, Junhua Li, Huijue Jia, Zhou Lan, Valentina Tremaroli, Piotr Dworzynski, H Bjørn Nielsen, Fredrik Bäckhed, Joël Doré, Emmanuelle Le Chatelier, S Dusko Ehrlich, John C Lin, Manimozhiyan Arumugam, Jun Wang, Lise Madsen, Karsten Kristiansen
A catalog of the mouse gut metagenome. Nature biotechnology 33 (10) (2015)
Junhua Li, Huijue Jia, Xianghang Cai, Huanzi Zhong, Qiang Feng, Shinichi Sunagawa, Manimozhiyan Arumugam, Jens Roat Kultima, Edi Prifti, Trine Nielsen, Agnieszka Sierakowska Juncker, Chaysavanh Manichanh, Bing Chen, Wenwei Zhang, Florence Levenez, Juan Wang, Xun Xu, Liang Xiao, Suisha Liang, Dongya Zhang, Zhaoxi Zhang, Weineng Chen, Hailong Zhao, Jumana Yousuf Al-Aama, Sherif Edris, Huanming Yang, Jian Wang, Torben Hansen, Henrik Bjørn Nielsen, Søren Brunak, Karsten Kristiansen, Francisco Guarner, Oluf Pedersen, Joel Doré, S Dusko Ehrlich, null null, Peer Bork, Jun Wang, null null
An integrated catalog of reference genes in the human gut microbiome. Nature biotechnology 32 (8) (2014)
H Bjørn Nielsen, Mathieu Almeida, Agnieszka Sierakowska Juncker, Simon Rasmussen, Junhua Li, Shinichi Sunagawa, Damian R Plichta, Laurent Gautier, Anders G Pedersen, Emmanuelle Le Chatelier, Eric Pelletier, Ida Bonde, Trine Nielsen, Chaysavanh Manichanh, Manimozhiyan Arumugam, Jean-Michel Batto, Marcelo B Quintanilha Dos Santos, Nikolaj Blom, Natalia Borruel, Kristoffer S Burgdorf, Fouad Boumezbeur, Francesc Casellas, Joël Doré, Piotr Dworzynski, Francisco Guarner, Torben Hansen, Falk Hildebrand, Rolf S Kaas, Sean Kennedy, Karsten Kristiansen, Jens Roat Kultima, Pierre Léonard, Florence Levenez, Ole Lund, Bouziane Moumen, Denis Le Paslier, Nicolas Pons, Oluf Pedersen, Edi Prifti, Junjie Qin, Jeroen Raes, Søren Sørensen, Julien Tap, Sebastian Tims, David W Ussery, Takuji Yamada, null null, Pierre Renault, Thomas Sicheritz-Ponten, Peer Bork, Jun Wang, Søren Brunak, S Dusko Ehrlich, null null
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes. Nature biotechnology 32 (8) (2014)
Shinichi Sunagawa, Daniel R Mende, Georg Zeller, Fernando Izquierdo-Carrasco, Simon A Berger, Jens Roat Kultima, Luis Pedro Coelho, Manimozhiyan Arumugam, Julien Tap, Henrik Bjørn Nielsen, Simon Rasmussen, Søren Brunak, Oluf Pedersen, Francisco Guarner, Willem M de Vos, Jun Wang, Junhua Li, Joël Doré, S Dusko Ehrlich, Alexandros Stamatakis, Peer Bork
Metagenomic species profiling using universal phylogenetic marker genes. Nature methods 10 (12) (2013)

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Publication Activity (10 Years)

Top Topics

Top Venues

Manimozhiyan Arumugam