Arshad Ismail (Ismail Arshad)

Loop profile ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 51

Top Topics

Antimicrobial Resistance

Respiratory Syndrome Coronavirus

Top Venues

Microbiology resource announcements

Tropical medicine and infectious disease

This page only lists publications with an associated author ORCID identifier.

Publications

Chia-Yu Chen, Wai-Yin Chan, Arshad Ismail, Shüné V Oliver
Characterization of the Tissue and Strain-Specific Microbiota of Anopheles funestus Giles (Diptera: Culicidae). Tropical medicine and infectious disease 9 (4) (2024)
Cara M Dunaiski, Marleen M Kock, Wai Yin Chan, Arshad Ismail, Remco P H Peters
Molecular epidemiology and antimicrobial resistance of vaginal Candida glabrata isolates in Namibia. Medical mycology (2024)
Rito L Mikhari, Susan Meiring, Linda de Gouveia, Wai Yin Chan, Keith A Jolley, Daria Van Tyne, Lee H Harrison, Henju Marjuki, Arshad Ismail, Vanessa Quan, Cheryl Cohen, Sibongile Walaza, Anne von Gottberg, Mignon du Plessis
Genomic diversity and antimicrobial susceptibility of invasive Neisseria meningitidis in South Africa, 2016-2021. The Journal of infectious diseases (2024)
Rito L Mikhari, Susan Meiring, Linda de Gouveia, Wai Yin Chan, Keith A Jolley, Daria Van Tyne, Lee H Harrison, Henju Marjuki, Arshad Ismail, Vanessa Quan, Cheryl Cohen, Sibongile Walaza, Anne von Gottberg, Mignon du Plessis
Genomic diversity and antimicrobial susceptibility of invasive Neisseria meningitidis in South Africa, 2016-2021. The Journal of infectious diseases (2024)
Chia-Yu Chen, Wai-Yin Chan, Arshad Ismail, Shüné V Oliver
Characterization of the Tissue and Strain-Specific Microbiota of Anopheles funestus Giles (Diptera: Culicidae). Tropical medicine and infectious disease 9 (4) (2024)
Chia-Yu Chen, Wai-Yin Chan, Arshad Ismail, Shüné V Oliver
Characterization of the Tissue and Strain-Specific Microbiota of Anopheles funestus Giles (Diptera: Culicidae). Tropical medicine and infectious disease 9 (4) (2024)
Rotem Lapidot, Tyler Faits, Arshad Ismail, Mushal Allam, Zamantungwak Khumalo, William B MacLeod, Geoffrey Kwenda, Zachariah Mupila, Ruth Nakazwe, Daniel Segrè, William Evan Johnson, Donald M Thea, Lawrence Mwananyanda, Christopher J Gill
Nasopharyngeal Dysbiosis Precedes the Development of Lower Respiratory Tract Infections in Young Infants, a Longitudinal Infant Cohort Study. Gates open research 6 (2024)
Cara M Dunaiski, Marleen M Kock, Wai Yin Chan, Arshad Ismail, Remco P H Peters
Molecular epidemiology and antimicrobial resistance of vaginal Candida glabrata isolates in Namibia. Medical mycology 62 (2) (2024)
Thabo Hamiwe, Debbie Ann White, Stanford Kwanda, Arshad Ismail, Susan Klugman, Lore Van Bruwaene, Ameena Goga, Marleen M Kock, Anthony Marius Smith, Marthie M Ehlers
Detection of the epidemic Pseudomonas aeruginosa AUST-03 (ST242) strain in people with cystic fibrosis in South Africa. Pediatric pulmonology (2024)
Natalie Viljoen, Arshad Ismail, Jacqueline Weyer, Mabusetsa Joseph Makalo
A rabies-related lyssavirus from a Nycticeinops schlieffeni bat with neurological signs, South Africa. Microbiology resource announcements (2023)
Kelechi B Chukwu, Ovokeroye A Abafe, Daniel Gyamfi Amoako, Arshad Ismail, Sabiha Yusuf Essack, Akebe Luther King Abia
Impact of Environmental Sub-Inhibitory Concentrations of Antibiotics, Heavy Metals, and Biocides on the Emergence of Tolerance and Effects on the Mutant Selection Window in E. coli . Microorganisms 11 (9) (2023)
Christiana O Shobo, Daniel Gyamfi Amoako, Mushal Allam, Arshad Ismail, Sabiha Yusuf Essack, Linda A Bester
A Genomic Snapshot of Antibiotic-Resistant Enterococcus faecalis within Public Hospital Environments in South Africa. Global health, epidemiology and genomics 2023 (2023)
Aubrey R Odom-Maybe, Jessica McClintock, Christopher J Gill, Rachel C Pieciak, Arshad Ismail, William B MacLeod, William Evan Johnson, Rotem Lapidot
Analysis of nasopharyngeal microbiome patterns in Zambian infants with fatal acute febrile illness. bioRxiv : the preprint server for biology (2023)
Nireshni Mitchev, Ravesh Singh, Veron Ramsuran, Arshad Ismail, Mushal Allam, Stanford Kwanda, Florah Mnyameni, Sharana Mahomed, Khine Swe Swe-Han, Abraham J Niehaus, Koleka P Mlisana
Assessment of Antibiotic Resistance and Efflux Pump Gene Expression in Neisseria Gonorrhoeae Isolates from South Africa by Quantitative Real-Time PCR and Regression Analysis. International journal of microbiology 2022 (2022)
Cathrine Scheepers, Josie Everatt, Daniel Gyamfi Amoako, Houriiyah Tegally, Constantinos Kurt Wibmer, Anele Mnguni, Arshad Ismail, Boitshoko Mahlangu, Bronwen E Lambson, Darren P Martin, Eduan Wilkinson, James Emmanuel San, Jennifer Giandhari, Nelia Manamela, Noxolo Ntuli, Prudence Kgagudi, Sandile Cele, Simone I Richardson, Sureshnee Pillay, Thabo Mohale, Upasana Ramphal, Yeshnee Naidoo, Zamantungwa T Khumalo, Gaurav Kwatra, Glenda Gray, Linda-Gail Bekker, Shabir A Madhi, Vicky Baillie, Wesley C Van Voorhis, Florette K Treurnicht, Marietjie Venter, Koleka Mlisana, Nicole Wolter, Alex Sigal, Carolyn Williamson, Nei-Yuan Hsiao, Nokukhanya Msomi, Tongai Gibson Maponga, Wolfgang Preiser, Zinhle Makatini, Richard J Lessells, Penny L Moore, Tulio de Oliveira, Anne von Gottberg, Jinal N Bhiman
Emergence and phenotypic characterization of the global SARS-CoV-2 C.1.2 lineage. Nature communications 13 (1) (2022)
Khethiwe Mtshali, Zamantungwa Thobeka Happiness Khumalo, Stanford Kwenda, Arshad Ismail, Oriel Matlahane Molifi Thekisoe
Exploration and comparison of bacterial communities present in bovine faeces, milk and blood using 16S rRNA metagenomic sequencing. PloS one 17 (8) (2022)
Nicole Wolter, Waasila Jassat, Sibongile Walaza, Richard Welch, Harry Moultrie, Michelle J Groome, Daniel Gyamfi Amoako, Josie Everatt, Jinal N Bhiman, Cathrine Scheepers, Naume Tebeila, Nicola Chiwandire, Mignon du Plessis, Nevashan Govender, Arshad Ismail, Allison Glass, Koleka Mlisana, Wendy Stevens, Florette K Treurnicht, Kathleen Subramoney, Zinhle Makatini, Nei-Yuan Hsiao, Raveen Parboosing, Jeannette Wadula, Hannah Hussey, Mary-Ann Davies, Andrew Boulle, Anne von Gottberg, Cheryl Cohen
Clinical severity of SARS-CoV-2 Omicron BA.4 and BA.5 lineages compared to BA.1 and Delta in South Africa. Nature communications 13 (1) (2022)
Wai Yin Chan, Phillip Senzo Mtshali, Antoinette Grobbelaar, Naazneen Moolla, Thabo Mohale, Michelle Lowe, Morne Du Plessis, Arshad Ismail, Jacqueline Weyer
Coding-Complete Genome Sequences for Two Confirmed Monkeypox Cases in South Africa 2022. Microbiology resource announcements (2022)
Victor Vusi Mabasa, Walda Brenda van Zyl, Arshad Ismail, Mushal Allam, Maureen Beatrice Taylor, Janet Mans
Multiple Novel Human Norovirus Recombinants Identified in Wastewater in Pretoria, South Africa by Next-Generation Sequencing. Viruses 14 (12) (2022)
Raquel Viana, Sikhulile Moyo, Daniel Gyamfi Amoako, Houriiyah Tegally, Cathrine Scheepers, Christian L Althaus, Ugochukwu J Anyaneji, Phillip A Bester, Maciej F Boni, Mohammed Chand, Wonderful T Choga, Rachel Colquhoun, Michaela Davids, Koen Deforche, Deelan Doolabh, Louis du Plessis, Susan Engelbrecht, Josie Everatt, Jennifer Giandhari, Marta Giovanetti, Diana Hardie, Verity Hill, Nei-Yuan Hsiao, Arash Iranzadeh, Arshad Ismail, Charity Joseph, Rageema Joseph, Legodile Koopile, Sergei L Kosakovsky Pond, Moritz U G Kraemer, Lesego Kuate-Lere, Oluwakemi Laguda-Akingba, Onalethatha Lesetedi-Mafoko, Richard J Lessells, Shahin Lockman, Alexander G Lucaci, Arisha Maharaj, Boitshoko Mahlangu, Tongai Maponga, Kamela Mahlakwane, Zinhle Makatini, Gert Marais, Dorcas Maruapula, Kereng Masupu, Mogomotsi Matshaba, Simnikiwe Mayaphi, Nokuzola Mbhele, Mpaphi B Mbulawa, Adriano Mendes, Koleka Mlisana, Anele Mnguni, Thabo Mohale, Monika Moir, Kgomotso Moruisi, Mosepele Mosepele, Gerald Motsatsi, Modisa S Motswaledi, Thongbotho Mphoyakgosi, Nokukhanya Msomi, Peter N Mwangi, Yeshnee Naidoo, Noxolo Ntuli, Martin Nyaga, Lucier Olubayo, Sureshnee Pillay, Botshelo Radibe, Yajna Ramphal, Upasana Ramphal, James E San, Lesley Scott, Roger Shapiro, Lavanya Singh, Pamela Smith-Lawrence, Wendy Stevens, Amy Strydom, Kathleen Subramoney, Naume Tebeila, Derek Tshiabuila, Joseph Tsui, Stephanie van Wyk, Steven Weaver, Constantinos K Wibmer, Eduan Wilkinson, Nicole Wolter, Alexander E Zarebski, Boitumelo Zuze, Dominique Goedhals, Wolfgang Preiser, Florette Treurnicht, Marietje Venter, Carolyn Williamson, Oliver George Pybus, Jinal N Bhiman, Allison Glass, Darren P Martin, Andrew Rambaut, Simani Gaseitsiwe, Anne von Gottberg, Tulio de Oliveira
Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa. Nature 603 (7902) (2022)
Houriiyah Tegally, James Emmanuel San, Matthew Cotten, Monika Moir, Bryan Tegomoh, Gerald Mboowa, Darren P Martin, Cheryl Baxter, Arnold W Lambisia, Amadou Diallo, Daniel Gyamfi Amoako, Moussa M Diagne, Abay Sisay, Abdel Rahman N Zekri, Abdou Salam Gueye, Abdoul K Sangare, Abdoul-Salam Ouedraogo, Abdourahmane Sow, Abdualmoniem O Musa, Abdul K Sesay, Abe G Abias, Adam I Elzagheid, Adamou Lagare, Adedotun-Sulaiman Kemi, Aden Elmi Abar, Adeniji A Johnson, Adeola Fowotade, Oluwapelumi Olufemi Adeyemi, Adrienne Amuri Aziza, Agnes Juru, Ahmed M Kandeil, Ahmed Mostafa, Ahmed E O Ouma, Ahmed Sayed, Akano Kazeem, Aladje Balde, Sarel Malan, Alexander J Trotter, Allan Campbell, Alpha K Keita, Amadou Kone, Amal Bouzid, Amal Souissi, Ambrose Agweyu, Amel Naguib, Ana V Gutierrez, Anatole Nkeshimana, Andrew J Page, Anges Yadouleton, Anika Vinze, Anise N Happi, Anissa Chouikha, Arash Iranzadeh, Arisha Maharaj, Armel L Batchi-Bouyou, Arshad Ismail, Augustina Angelina Annan, Augustine Goba, Ayoade Femi, Ayotunde E Sijuwola, Marycelin Mandu Baba, Babatunde L Salako, Bamidele S Oderinde, Bankole Bolajoko, Bassirou Diarra, Belinda L Herring, Benjamin Tsofa, Jean-Bernard Lekana-Douki, Bernard Mvula, Berthe-Marie Njanpop-Lafourcade, Blessing T Marondera, Bouh Abdi Khaireh, Bourema Kouriba, Bright Adu, Brigitte Pool, Bronwyn L MacInnis, Cara E Brook, Carolyn Williamson, Cassien Nduwimana, Catherine Anscombe, Catherine B Pratt, Cathrine Scheepers, Chantal G Akoua-Koffi, Charles N Agoti, Chastel M Mapanguy, Cheikh Loucoubar, Chika Kingsley Onwuamah, Chikwe Ihekweazu, Christian Noël Malaka, Christophe Peyrefitte, Chukwa Grace, Chukwuma E Omoruyi, Clotaire D Rafaï, Collins Misita Morang'a, Cyril Oshomah Erameh, Daniel Lule Bugembe, Daniel J Bridges, Daniel Mukadi-Bamuleka, Daniel J Park, David A Rasmussen, David Baker, David James Nokes, Deogratius Ssemwanga, Derek Tshiabuila, Dominic Selorm Yao Amuzu, Dominique Goedhals, Donald S Grant, Donwilliams O Omuoyo, Dorcas Maruapula, Dorcas W Wanjohi, Ebenezer Foster-Nyarko, Eddy Kinganda Lusamaki, Edgar Simulundu, Edidah M Ong'era, Edith N Ngabana, Edward O Abworo, Edward Otieno, Edwin Shumba, Edwine W Barasa, El Bara Ahmed, Elhadi A Ahmed, Emmanuel Lokilo, Enatha Mukantwari, Eromon Philomena, Essia Belarbi, Etienne Simon-Loriere, Etilé A Anoh, Eusebio Manuel, Fabian Leendertz, Fahn M Taweh, Wasfi Fares, Fatma Abdelmoula, Faustinos T Takawira, Fawzi Derrar, Fehintola V Ajogbasile, Florette Treurnicht, Onikepe A Folarin, Francine Ntoumi, Francisca M Muyembe, Frank E Z Ragomzingba, Fred A Dratibi, Fred-Akintunwa Iyanu, Gabriel K Mbunsu, Gaetan J A Thilliez, Gemma L Kay, George O Akpede, Gert U van Zyl, Gordon A Awandare, Grace S Kpeli, Grit Schubert, Gugu P Maphalala, Hafaliana Christian Ranaivoson, Hannah E Omunakwe, Harris Onywera, Haruka Abe, Hela H Karray, Hellen Nansumba, Henda Triki, Herve Albéric Adje Kadjo, Hesham Elghazaly, Hlanai Gumbo, Hota Mathieu, Hugo Kavunga-Membo, Ibtihel Smeti, Idowu B Olawoye, Ifedayo M O Adetifa, Ikponmwosa Odia, Ilhem Boutiba Ben Boubaker, Iluoreh Ahmed Muhammad, Isaac Ssewanyana, Isatta Wurie, Iyaloo S Konstantinus, Jacqueline Wemboo Afiwa Halatoko, James Ayei, Janaki Sonoo, Jean-Claude Makangara Cigolo, Jean-Jacques M Tamfum, Jean Michel Heraud, Jeffrey G Shaffer, Jennifer Giandhari, Jennifer Musyoki, Jerome Nkurunziza, Jessica N Uwanibe, Jinal N Bhiman, Jiro Yasuda, Joana F M de Morais, Jocelyn Kiconco, John D Sandi, John Huddleston, John K Odoom, John Mwita Morobe, John O Gyapong, John T Kayiwa, Johnson C Okolie, Joicymara S Xavier, Jones Gyamfi, Joseph F Wamala, Joseph H K Bonney, Joseph Nyandwi, Josie Everatt, Joweria Nakaseegu, Joyce M Ngoi, Joyce Namulondo, Judith Uche Oguzie, Julia C Andeko, Julius Julian Lutwama, Juma J H Mogga, Justin O'Grady, Katherine J Siddle, Kathleen Victoir, Kayode T Adeyemi, Kefentse A Tumedi, Kevin S Carvalho, Khadija Said Mohammed, Koussay Dellagi, Kunda G Musonda, Kwabena Obeng Duedu, Lamia Fki-Berrajah, Lavanya Singh, Lenora M Kepler, Leon Biscornet, Leonardo de Oliveira Martins, Lucious Chabuka, Luicer Olubayo, Lul Deng Ojok, Lul Lojok Deng, Lynette Isabella Ochola-Oyier, Lynn Tyers, Madisa Mine, Magalutcheemee Ramuth, Maha Mastouri, Mahmoud M Elhefnawi, Maimouna Mbanne, Maitshwarelo I Matsheka, Malebogo Kebabonye, Mamadou Diop, Mambu Momoh, Maria da Luz Lima Mendonça, Marietjie Venter, Marietou F Paye, Martin Faye, Martin M Nyaga, Mathabo Mareka, Matoke-Muhia Damaris, Maureen W Mburu, Maximillian G Mpina, Michael Owusu, Michael R Wiley, Mirabeau Y Tatfeng, Mitoha Ondo'o Ayekaba, Mohamed Abouelhoda, Mohamed Amine Beloufa, Mohamed G Seadawy, Mohamed K Khalifa, Mooko Marethabile Matobo, Mouhamed Kane, Mounerou Salou, Mphaphi B Mbulawa, Mwenda C Mulenga, Mushal Allam, My V T Phan, Nabil Abid, Nadine Rujeni, Nadir Abuzaid, Nalia Ismael, Nancy Elguindy, Ndeye Marieme Top, Ndongo Dia, Nédio Mabunda, Nei-Yuan Hsiao, Nelson Boricó Silochi, Ngiambudulu M Francisco, Ngonda Saasa, Nicholas Bbosa, Nickson Murunga, Nicksy Gumede, Nicole Wolter, Nikita Sitharam, Nnaemeka Ndodo, Nnennaya A Ajayi, Noël Tordo, Nokuzola Mbhele, Norosoa H Razanajatovo, Nosamiefan Iguosadolo, Nwando Mba, Ojide C Kingsley, Okogbenin Sylvanus, Oladiji Femi, Moses Olubusuyi Adewumi, Olumade Testimony, Olusola A Ogunsanya, Oluwatosin Fakayode, Onwe E Ogah, Ope-Ewe Oludayo, Ousmane Faye, Pamela Smith-Lawrence, Pascale Ondoa, Patrice Combe, Patricia Nabisubi, Patrick Semanda, Paul E Oluniyi, Paulo Arnaldo, Peter Kojo Quashie, Peter O Okokhere, Philip Bejon, Philippe Dussart, Phillip A Bester, Placide K Mbala, Pontiano Kaleebu, Priscilla Abechi, Rabeh El Shesheny, Rageema Joseph, Ramy Karam Aziz, René G Essomba, Reuben Ayivor-Djanie, Richard Njouom, Richard Odame Phillips, Richmond Gorman, Robert A Kingsley, Rosa Maria D E S A Neto Rodrigues, Rosemary Ajuma Audu, Rosina A A Carr, Saba Gargouri, Saber Masmoudi, Sacha Bootsma, Safietou Sankhe, Sahra Isse Mohamed, Saibu Femi, Salma Mhalla, Salome Hosch, Samar Kamal Kassim, Samar Metha, Sameh Trabelsi, Sara Hassan Agwa, Sarah Wambui Mwangi, Ousmane A Koita, Sheila Makiala-Mandanda, Sherihane Aryeetey, Shymaa S Ahmed, Side Mohamed Ahmed, Siham Elhamoumi, Sikhulile Moyo, Silvia Lutucuta, Simani Gaseitsiwe, Simbirie Jalloh, Soa Fy Andriamandimby, Sobajo Oguntope, Solène Grayo, Sonia Etenna Lekana-Douki, Sophie Prosolek, Soumeya Ouangraoua, Stephanie van Wyk, Stephen F Schaffner, Stephen Kanyerezi, Steve Ahuka-Mundeke, Steven Rudder, Sureshnee Pillay, Susan Nabadda, Sylvie Behillil, Sylvie L Budiaki, Sylvie van der Werf, Tapfumanei Mashe, Thabo Mohale, Thanh Le Viet, Thirumalaisamy P Velavan, Tobias Schindler, Tongai Gibson Maponga, Trevor Felix Bedford, Ugochukwu J Anyaneji, Chinedu A Ugwu, Upasana Ramphal, Uwem Etop George, Vincent Enouf, Vishvanath Nene, Vivianne Gorova, Wael H Roshdy, Wasim Abdul Karim, William K Ampofo, Wolfgang Preiser, Wonderful T Choga, Yahaya Ali Ahmed, Yajna Ramphal, Yaw Bediako, Yeshnee Naidoo, Yvan Butera, Zaydah R de Laurent, null null, Ahmed E O Ouma, Anne von Gottberg, George Githinji, Matshidiso Moeti, Oyewale Tomori, Pardis C Sabeti, Amadou A Sall, Samuel O Oyola, Yenew K Tebeje, Sofonias K Tessema, Tulio de Oliveira, Christian T Happi, Richard J Lessells, John Nkengasong, Eduan Wilkinson
The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance. Science (New York, N.Y.) 378 (6615) (2022)
Victor Vusi Mabasa, Walda Brenda van Zyl, Arshad Ismail, Mushal Allam, Maureen Beatrice Taylor, Janet Mans
Multiple Novel Human Norovirus Recombinants Identified in Wastewater in Pretoria, South Africa by Next-Generation Sequencing. Viruses 14 (12) (2022)
Isabel Fourie, Jumari Steyn, June Williams, Arshad Ismail, Petrus Jansen van Vuren, Marietjie Venter
Epidemiological and Genomic Characterisation of Middelburg and Sindbis Alphaviruses Identified in Horses with Febrile and Neurological Infections, South Africa (2014-2018). Viruses 14 (9) (2022)
Nireshni Mitchev, Ravesh Singh, Veron Ramsuran, Arshad Ismail, Mushal Allam, Stanford Kwanda, Florah Mnyameni, Sharana Mahomed, Khine Swe Swe-Han, Abraham J Niehaus, Koleka P Mlisana
High-Resolution Melting Analysis to Detect Antimicrobial Resistance Determinants in South African Neisseria gonorrhoeae Clinical Isolates and Specimens. International journal of microbiology 2022 (2022)
Isabel Fourie, June Williams, Arshad Ismail, Petrus Jansen van Vuren, Anton Stoltz, Marietjie Venter
Detection and genome characterization of Middelburg virus strains isolated from CSF and whole blood samples of humans with neurological manifestations in South Africa. PLoS neglected tropical diseases 16 (1) (2022)
Victor Vusi Mabasa, Walda Brenda van Zyl, Arshad Ismail, Mushal Allam, Maureen Beatrice Taylor, Janet Mans
Multiple Novel Human Norovirus Recombinants Identified in Wastewater in Pretoria, South Africa by Next-Generation Sequencing. Viruses 14 (12) (2022)
Victor Vusi Mabasa, Walda Brenda van Zyl, Arshad Ismail, Mushal Allam, Maureen Beatrice Taylor, Janet Mans
Multiple Novel Human Norovirus Recombinants Identified in Wastewater in Pretoria, South Africa by Next-Generation Sequencing. Viruses 14 (12) (2022)
Adriano Mendes, Olivia Lentsoane, Mushal Allam, Zamantungwaka Khumalo, Arshad Ismail, Jacobus A W Coetzer, Marietjie Venter
Phylogenetic Characterisation of the Full Genome of a Bagaza Virus Isolate from Bird Fatalities in South Africa. Viruses 14 (7) (2022)
Victor Vusi Mabasa, Walda Brenda van Zyl, Arshad Ismail, Mushal Allam, Maureen Beatrice Taylor, Janet Mans
Multiple Novel Human Norovirus Recombinants Identified in Wastewater in Pretoria, South Africa by Next-Generation Sequencing. Viruses 14 (12) (2022)
Victor Vusi Mabasa, Walda Brenda van Zyl, Arshad Ismail, Mushal Allam, Maureen Beatrice Taylor, Janet Mans
Multiple Novel Human Norovirus Recombinants Identified in Wastewater in Pretoria, South Africa by Next-Generation Sequencing. Viruses 14 (12) (2022)
Wilhelmina Strasheim, Olga Perovic, Ashika Singh-Moodley, Stanford Kwanda, Arshad Ismail, Michelle Lowe
Ward-specific clustering of methicillin-resistant Staphylococcus aureus spa-type t037 and t045 in two hospitals in South Africa: 2013 to 2017. PloS one 16 (6) (2021)
Houriiyah Tegally, Eduan Wilkinson, Marta Giovanetti, Arash Iranzadeh, Vagner Fonseca, Jennifer Giandhari, Deelan Doolabh, Sureshnee Pillay, Emmanuel James San, Nokukhanya Msomi, Koleka Mlisana, Anne von Gottberg, Sibongile Walaza, Mushal Allam, Arshad Ismail, Thabo Mohale, Allison J Glass, Susan Engelbrecht, Gert U van Zyl, Wolfgang Preiser, Francesco Petruccione, Alex Sigal, Diana Hardie, Gert Marais, Nei-Yuan Hsiao, Stephen Korsman, Mary-Ann Davies, Lynn Tyers, Innocent Mudau, Denis York, Caroline Maslo, Dominique Goedhals, Shareef Abrahams, Oluwakemi Laguda-Akingba, Arghavan Alisoltani-Dehkordi, Adam Godzik, Constantinos Kurt Wibmer, Bryan Trevor Sewell, Paul S Wikramaratna, Luiz Carlos Junior Alcantara, Sergei L Kosakovsky Pond, Steven Weaver, Darren Martin, Richard J Lessells, Jinal N Bhiman, Carolyn Williamson, Tulio de Oliveira
Detection of a SARS-CoV-2 variant of concern in South Africa. Nature 592 (7854) (2021)
Eduan Wilkinson, Marta Giovanetti, Houriiyah Tegally, James Emmanuel San, Richard J Lessells, Diego Cuadros, Darren P Martin, David A Rasmussen, Abdel Rahman N Zekri, Abdoul K Sangare, Abdoul-Salam Ouedraogo, Abdul K Sesay, Abechi Priscilla, Adedotun-Sulaiman Kemi, Moses Olubusuyi Adewumi, Oluwapelumi Olufemi Adeyemi, Adnène Hammami, Adrienne Amuri Aziza, Ahmad Sayed, Ahmed E O Ouma, Aida Elargoubi, Nnennaya A Ajayi, Ajogbasile F Victoria, Akano Kazeem, Akpede George, Alexander J Trotter, Yahaya Ali Ahmed, Alpha K Keita, Amadou Diallo, Amadou Kone, Amal Souissi, Amel Chtourou, Ana V Gutierrez, Andrew J Page, Anika Vinze, Arash Iranzadeh, Arnold W Lambisia, Arshad Ismail, Rosemary Ajuma Audu, Augustina Angelina Annan, Ayoade Femi, Azeddine Ibrahimi, Baba Marycelin, Bamidele S Oderinde, Bankole Bolajoko, Beatrice Dhaala, Belinda L Herring, Berthe-Marie Njanpop-Lafourcade, Bronwyn L MacInnis, Bronwyn McInnis, Bryan Tegomoh, Cara E Brook, Catherine B Pratt, Cathrine Scheepers, Chantal G Akoua-Koffi, Charles N Agoti, Christophe Peyrefitte, Claudia A Daubenberger, Collins Misita Morang'a, David James Nokes, Daniel Gyamfi Amoako, Daniel Lule Bugembe, Daniel J Park, David Baker, Deelan Doolabh, Deogratius Ssemwanga, Derek Tshiabuila, Bassirou Diarra, Dominic Selorm Yao Amuzu, Dominique Goedhals, Donwilliams O Omuoyo, Dorcas Maruapula, Ebenezer Foster-Nyarko, Eddy Kinganda Lusamaki, Edgar Simulundu, Edidah M Ong'era, Edith N Ngabana, Edwin Shumba, Elmostafa El Fahime, Emmanuel Lokilo, Enatha Mukantwari, Eromon Philomena, Essia Belarbi, Etienne Simon-Loriere, Etilé A Anoh, Fabian Hubertus Leendertz, Faida Ajili, Fakayode O Enoch, Wasfi Fares, Fatma Abdelmoula, Fausta S Mosha, Faustinos T Takawira, Fawzi Derrar, Fériel Bouzid, Onikepe A Folarin, Fowotade Adeola, Francisca M Muyembe, Hae-Young Kim, Fred A Dratibi, Gabriel K Mbunsu, Gaetan J A Thilliez, Gemma L Kay, George Githinji, Gert U van Zyl, Gordon A Awandare, Grit Schubert, Gugu P Maphalala, Hafaliana Christian Ranaivoson, Hajar Lemriss, Happi Anise, Haruka Abe, Hela H Karray, Hellen Nansumba, Hesham A Elgahzaly, Hlanai Gumbo, Ibtihel Smeti, Ikhlas B Ayed, Ikponmwosa Odia, Ilhem Boutiba Ben Boubaker, Imed Gaaloul, Inbal Gazy, Innocent Mudau, Isaac Ssewanyana, Iyaloo Konstantinus, Jean B Lekana-Douk, Jean-Claude Makangara Cigolo, Jean-Jacques M Tamfum, Jean Michel Heraud, Jeffrey G Shaffer, Jennifer Giandhari, Jiro Yasuda, Joana Q Mends, Jocelyn Kiconco, John Mwita Morobe, John O Gyapong, Johnson C Okolie, John T Kayiwa, Johnathan A Edwards, Jones Gyamfi, Jouali Farah, Joweria Nakaseegu, Joyce M Ngoi, Joyce Namulondo, Julia C Andeko, Julius Julian Lutwama, Justin O'Grady, Katherine J Siddle, Kayode T Adeyemi, Kefentse A Tumedi, Khadija Said Mohammed, Hae-Young Kim, Kwabena Obeng Duedu, Lahcen Belyamani, Lamia Fki-Berrajah, Lavanya Singh, Leonardo de Oliveira Martins, Lynn Tyers, Magalutcheemee Ramuth, Maha Mastouri, Mahjoub Aouni, Mahmoud M Elhefnawi, Maitshwarelo I Matsheka, Malebogo Kebabonye, Mamadou Diop, Manel Turki, Marietou Paye, Martin M Nyaga, Mathabo Mareka, Matoke-Muhia Damaris, Maureen W Mburu, Maximillian G Mpina, Mba Nwando, Michael Owusu, Michael R Wiley, Mirabeau T Youtchou, Mitoha O Ayekaba, Mohamed Abouelhoda, Mohamed G Seadawy, Mohamed K Khalifa, Mooko Sekhele, Mouna Ouadghiri, Moussa M Diagne, Mwenda C Mulenga, Mushal Allam, My V T Phan, Nabil Abid, Nadia Touil, Nadine Rujeni, Najla Kharrat, Nalia Ismael, Ndongo Dia, Nedio Mabunda, Nei-Yuan Hsiao, Nelson Boricó Silochi, Ngoy Nsenga, Nicksy Gumede, Nicola M Mulder, Nnaemeka Ndodo, Norosoa H Razanajatovo, Nosamiefan Iguosadolo, Judith Uche Oguzie, Ojide C Kingsley, Okogbenin Sylvanus, Okokhere Peter, Oladiji Femi, Olawoye Idowu, Olumade Testimony, Omoruyi E Chukwuma, Onwe E Ogah, Chika Kingsley Onwuamah, Cyril Oshomah Erameh, Ousmane Faye, Oyewale Tomori, Pascale Ondoa, Patrice Combe, Patrick Semanda, Paul E Oluniyi, Paulo Arnaldo, Peter Kojo Quashie, Philippe Dussart, Phillip A Bester, Placide K Mbala, Reuben Ayivor-Djanie, Richard Njouom, Richard Odame Phillips, Richmond Gorman, Robert A Kingsley, Rosina A A Carr, Saâd El Kabbaj, Saba Gargouri, Saber Masmoudi, Safietou Sankhe, Salako B Lawal, Samar Kamal Kassim, Sameh Trabelsi, Samar Metha, Sami Kammoun, Sanaa Lemriss, Sara Hassan Agwa, Sebastien Calvignac-Spencer, Stephen F Schaffner, Ousmane A Koita, Sheila M Mandanda, Sherihane Aryeetey, Shymaa S Ahmed, Siham Elhamoumi, Soafy Andriamandimby, Sobajo Tope, Sonia Lekana-Douki, Sophie J Prosolek, Soumeya Ouangraoua, Steve A Mundeke, Steven Rudder, Sumir Panji, Sureshnee Pillay, Susan Engelbrecht, Susan Nabadda, Sylvie Behillil, Sylvie L Budiaki, Sylvie van der Werf, Tapfumanei Mashe, Tarik Aanniz, Thabo Mohale, Thanh Le Viet, Tobias Schindler, Ugochukwu J Anyaneji, Chinedu A Ugwu, Upasana Ramphal, Uwanibe Jessica, Uwem Etop George, Vagner Fonseca, Vincent Enouf, Vivianne Gorova, Wael H Roshdy, William K Ampofo, Wolfgang Preiser, Wonderful T Choga, Yaw Bediako, Yeshnee Naidoo, Yvan Butera, Zaydah R de Laurent, Amadou A Sall, Ahmed Rebai, Anne von Gottberg, Bourema Kouriba, Carolyn Williamson, Daniel J Bridges, Ihekweazu Chikwe, Jinal N Bhiman, Madisa Mine, Matthew Cotten, Sikhulile Moyo, Simani Gaseitsiwe, Ngonda Saasa, Pardis C Sabeti, Pontiano Kaleebu, Yenew K Tebeje, Sofonias K Tessema, Christian Happi, John Nkengasong, Tulio de Oliveira
A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa. Science (New York, N.Y.) 374 (6566) (2021)
Nireshni Mitchev, Mushal Allam, Stanford Kwenda, Florah Mnyameni, Arshad Ismail, Abraham J Niehaus, Veron Ramsuran, Nigel Garrett, Ravesh Singh, Koleka P Mlisana
Genome Sequences of Five Novel Neisseria gonorrhoeae Sequence Types Isolated in KwaZulu-Natal, South Africa. Microbiology resource announcements 10 (9) (2021)
Houriiyah Tegally, Eduan Wilkinson, Richard J Lessells, Jennifer Giandhari, Sureshnee Pillay, Nokukhanya Msomi, Koleka Mlisana, Jinal N Bhiman, Anne von Gottberg, Sibongile Walaza, Vagner Fonseca, Mushal Allam, Arshad Ismail, Allison J Glass, Susan Engelbrecht, Gert Van Zyl, Wolfgang Preiser, Carolyn Williamson, Francesco Petruccione, Alex Sigal, Inbal Gazy, Diana Hardie, Nei-Yuan Hsiao, Darren Martin, Denis York, Dominique Goedhals, Emmanuel James San, Marta Giovanetti, Paul S Wikramaratna, Luiz Carlos Junior Alcantara, Tulio de Oliveira
Sixteen novel lineages of SARS-CoV-2 in South Africa. Nature medicine 27 (3) (2021)
Nireshni Mitchev, Ravesh Singh, Mushal Allam, Stanford Kwenda, Arshad Ismail, Nigel Garrett, Veron Ramsuran, Abraham J Niehaus, Koleka P Mlisana
Antimicrobial Resistance Mechanisms, Multilocus Sequence Typing, and NG-STAR Sequence Types of Diverse Neisseria gonorrhoeae Isolates in KwaZulu-Natal, South Africa. Antimicrobial agents and chemotherapy 65 (10) (2021)
Mohamed S Ali, Mohamed M Hassan, Sumaya Kambal, Abdalla Munir, Nusiba I Abdalla, Ahmed Hamad, Sara E Mohammed, Fatima E Ahmed, Omnia Hamid, Arshad Ismail, Mushal Allam
Genome Sequence of Escherichia coli Clone O25:H4 Sequence Type 131, Isolated from a Sudanese Patient with Urinary Tract Infection. Microbiology resource announcements 9 (11) (2020)
Yogandree Ramsamy, Koleka P Mlisana, Daniel Gyamfi Amoako, Akebe Luther King Abia, Mushal Allam, Arshad Ismail, Ravesh Singh, Sabiha Yusuf Essack
Comparative Pathogenomics of Aeromonas veronii from Pigs in South Africa: Dominance of the Novel ST657 Clone. Microorganisms 8 (12) (2020)
Ziyaad Valley-Omar, Alicia Cloete, Reneé Pieterse, Sibongile Walaza, Yusrah Salie-Bassier, Mikhail Smith, Nevashan Govender, Mpho Seleka, Orienka Hellferscee, Phillip Senzo Mtshali, Mushal Allam, Arshad Ismail, Tasneem Anthony, Michelle Seutloali, Kerrigan McCarthy, Lesley van Helden, Cheryl Cohen, Florette Kathleen Treurnicht
Human surveillance and phylogeny of highly pathogenic avian influenza A(H5N8) during an outbreak in poultry in South Africa, 2017. Influenza and other respiratory viruses 14 (3) (2020)
Juno Thomas, Nevashan Govender, Kerrigan M McCarthy, Linda K Erasmus, Timothy J Doyle, Mushal Allam, Arshad Ismail, Ntsieni Ramalwa, Phuti Sekwadi, Genevie Ntshoe, Andronica Shonhiwa, Vivien Essel, Nomsa Tau, Shannon Smouse, Hlengiwe M Ngomane, Bolele Disenyeng, Nicola A Page, Nelesh P Govender, Adriano G Duse, Rob Stewart, Teena Thomas, Deon Mahoney, Mathieu Tourdjman, Olivier Disson, Pierre Thouvenot, Mylène M Maury, Alexandre Leclercq, Marc Lecuit, Anthony M Smith, Lucille H Blumberg
Outbreak of Listeriosis in South Africa Associated with Processed Meat. The New England journal of medicine 382 (7) (2020)
Peter Coetzee, Alan John Guthrie, Karen Ebersohn, James N Maclachlan, Arshad Ismail, Antoinette van Schalkwyk, Estelle H Venter
Complete Genome Sequences of Virus Strains Isolated from Bottle A of the South African Live Attenuated Bluetongue Virus Vaccine. Microbiology resource announcements 9 (22) (2020)
Tsidiso G Maphanga, Monica Birkhead, Jose F Muñoz, Mushal Allam, Thokozile G Zulu, Christina A Cuomo, Ilan S Schwartz, Arshad Ismail, Serisha D Naicker, Ruth S Mpembe, Craig Corcoran, Sybren de Hoog, Chris Kenyon, Andrew M Borman, John A Frean, Nelesh P Govender MMed
Human Blastomycosis in South Africa Caused by Blastomyces percursus and Blastomyces emzantsi sp. nov., 1967 to 2014. Journal of clinical microbiology 58 (3) (2020)
Aymen Abdelhaleem, Almonther Hershan, Pradeep Agarwal, Abdullah Farasani, Shaheed V Omar, Arshad Ismail, Mushal Allam
Whole-Genome Sequencing of a Mycobacterium tuberculosis Strain Belonging to Lineage 1 (Indo-Oceanic) and the East African Indian Spoligotype, Isolated in Jazan, Saudi Arabia. Microbiology resource announcements 9 (33) (2020)
Mushal Allam, Arshad Ismail, Zamantungwa T H Khumalo, Stanford Kwenda, Peter van Heusden, Ruben Cloete, Constantinos Kurt Wibmer, Phillip Senzo Mtshali, Florah Mnyameni, Thabo Mohale, Kathleen Subramoney, Sibongile Walaza, Wendy Ngubane, Nevashan Govender, Nkengafac V Motaze, Jinal N Bhiman, null null
Genome Sequencing of a Severe Acute Respiratory Syndrome Coronavirus 2 Isolate Obtained from a South African Patient with Coronavirus Disease 2019. Microbiology resource announcements 9 (27) (2020)
Rodney Owusu-Darko, Mushal Allam, Arshad Ismail, Carlos A S Ferreira, Sílvia Dias de Oliveira, Elna Maria Buys
Comparative Genome Analysis of Bacillus sporothermodurans with Its Closest Phylogenetic Neighbor, Bacillus oleronius, and Bacillus cereus and Bacillus subtilis Groups. Microorganisms 8 (8) (2020)
Daniel Gyamfi Amoako, Anou M Somboro, Akebe Luther King Abia, Mushal Allam, Arshad Ismail, Linda A Bester, Sabiha Y Essack
Genome Mining and Comparative Pathogenomic Analysis of An Endemic Methicillin-Resistant Staphylococcus Aureus (MRSA) Clone, ST612-CC8-t1257-SCCmec_IVd(2B), Isolated in South Africa. Pathogens (Basel, Switzerland) 8 (4) (2019)
Petrus Jansen van Vuren, Jason T Ladner, Antoinette A Grobbelaar, Michael R Wiley, Sean Lovett, Mushal Allam, Arshad Ismail, Chantel A le Roux, Jacqueline Weyer, Naazneen Moolla, Nadia Storm, Joe Kgaladi, Mariano Sanchez-Lockhart, Ousman Conteh, Gustavo Palacios, Janusz T Pawęska
Phylodynamic Analysis of Ebola Virus Disease Transmission in Sierra Leone. Viruses 11 (1) (2019)
Ashika Singh-Moodley, Mushal Allam, Husna Ismail, Olga Perovic, Wilhelmina Strasheim, Senzo Mtshali, Arshad Ismail
Complete Genome Sequence of a Staphylococcus aureus Isolate from a Nasopharyngeal Swab from a Mine Worker in South Africa. Microbiology resource announcements 8 (50) (2019)
Mohamed S Ali, Sumaya Kambal, Abdalla Munir, Nusiba I Abdalla, Ahmed Hamad, Sara E Mohammed, Fatima E Ahmed, Omnia M Hamid, Mohamed M Hassan, Arshad Ismail, Mushal Allam
Whole-Genome Sequence of High-Risk Clone Sequence Type 111 of Pseudomonas aeruginosa Strain NUBRI-P, Isolated from a Wounded Sudanese Patient. Microbiology resource announcements 8 (40) (2019)
Anthony Marius Smith, Nomsa P Tau, John Bosco Kalule, Mark P Nicol, Mignon I McCulloch, Charlene A Jacobs, Kerrigan M McCarthy, Arshad Ismail, Mushal Allam, Jackie Kleynhans
Shiga toxin-producing Escherichia coli O26:H11 associated with a cluster of haemolytic uraemic syndrome cases in South Africa, 2017. Access microbiology 1 (9) (2019)
Yogandree Ramsamy, Koleka P Mlisana, Mushal Allam, Arshad Ismail, Ravesh Singh, Daniel Gyamfi Amoako, Sabiha Yusuf Essack
Whole-Genome Sequence of a Novel Sequence Type 3136 Carbapenem-Resistant Klebsiella pneumoniae Strain Isolated from a Hospitalized Patient in Durban, South Africa. Microbiology resource announcements 7 (23) (2018)