Markus Ralser

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2023
Publications (10 Years): 47

Top Venues

Nature microbiology

eLife

Nature communications

Nature metabolism

Charite Universitaetsmedizin Berlin

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Charite Universitaetsmedizin Berlin May 1o 2019

Germany

Director :: Department of Biochemistry

Publications

Lukasz Szyrwiel, Christoph Gille, Michael Mülleder, Vadim Demichev, Markus Ralser
Fast proteomics with dia-PASEF and analytical flow-rate chromatography. Proteomics (2023)
Stephan Kamrad, Clara Correia-Melo, Lukasz Szyrwiel, Simran Kaur Aulakh, Jürg Bähler, Vadim Demichev, Michael Mülleder, Markus Ralser
Metabolic heterogeneity and cross-feeding within isogenic yeast populations captured by DILAC. Nature microbiology (2023)
Johannes Hartl, Florian Kurth, Kai Kappert, David Horst, Michael Mülleder, Gunther Hartmann, Markus Ralser
Quantitative protein biomarker panels: a path to improved clinical practice through proteomics. EMBO molecular medicine (2023)
Matthew E H White, Ludwig R Sinn, D Marc Jones, Joost de Folter, Simran Kaur Aulakh, Ziyue Wang, Helen R Flynn, Lynn Krüger, Pinkus Tober-Lau, Vadim Demichev, Florian Kurth, Michael Mülleder, Véronique Blanchard, Christoph B Messner, Markus Ralser
Oxonium ion scanning mass spectrometry for large-scale plasma glycoproteomics. Nature biomedical engineering (2023)
Deepti Talwar, Colin G Miller, Justus Grossmann, Lukasz Szyrwiel, Torsten Schwecke, Vadim Demichev, Ana-Matea Mikecin Drazic, Anand Mayakonda, Pavlo Lutsik, Carmen Veith, Michael D Milsom, Karin Müller-Decker, Michael Mülleder, Markus Ralser, Tobias P Dick
The GAPDH redox switch safeguards reductive capacity and enables survival of stressed tumour cells. Nature metabolism (2023)
Stephan Kamrad, Clara Correia-Melo, Lukasz Szyrwiel, Simran Kaur Aulakh, Jürg Bähler, Vadim Demichev, Michael Mülleder, Markus Ralser
Metabolic heterogeneity and cross-feeding within isogenic yeast populations captured by DILAC. Nature microbiology 8 (3) (2023)
Stephan Kamrad, Clara Correia-Melo, Lukasz Szyrwiel, Simran Kaur Aulakh, Jürg Bähler, Vadim Demichev, Michael Mülleder, Markus Ralser
Metabolic heterogeneity and cross-feeding within isogenic yeast populations captured by DILAC. Nature microbiology 8 (3) (2023)
Spyros I Vernardis, Vadim Demichev, Oliver Lemke, Nana-Maria Grüning, Christoph Messner, Matt White, Maik Pietzner, Alina Peluso, Tinh-Hai Collet, Elana Henning, Christoph Gille, Archie I Campbell, Caroline Hayward, David J Porteous, Riccardo E Marioni, Michael Mülleder, Aleksej Zelezniak, Nicholas J Wareham, Claudia Langenberg, I Sadaf Farooqi, Markus Ralser
The impact of acute nutritional interventions on the plasma proteome. The Journal of clinical endocrinology and metabolism (2023)
Stephan Kamrad, Clara Correia-Melo, Lukasz Szyrwiel, Simran Kaur Aulakh, Jürg Bähler, Vadim Demichev, Michael Mülleder, Markus Ralser
Metabolic heterogeneity and cross-feeding within isogenic yeast populations captured by DILAC. Nature microbiology 8 (3) (2023)
Stephan Kamrad, Clara Correia-Melo, Lukasz Szyrwiel, Simran Kaur Aulakh, Jürg Bähler, Vadim Demichev, Michael Mülleder, Markus Ralser
Metabolic heterogeneity and cross-feeding within isogenic yeast populations captured by DILAC. Nature microbiology 8 (3) (2023)
Spyros I Vernardis, Vadim Demichev, Oliver Lemke, Nana-Maria Grüning, Christoph Messner, Matt White, Maik Pietzner, Alina Peluso, Tinh-Hai Collet, Elana Henning, Christoph Gille, Archie I Campbell, Caroline Hayward, David J Porteous, Riccardo E Marioni, Michael Mülleder, Aleksej Zelezniak, Nicholas J Wareham, Claudia Langenberg, I Sadaf Farooqi, Markus Ralser
The impact of acute nutritional interventions on the plasma proteome. The Journal of clinical endocrinology and metabolism (2023)
Simran Kaur Aulakh, Lara Sellés Vidal, Eric J South, Huadong Peng, Sreejith Jayasree Varma, Lucia Herrera-Dominguez, Markus Ralser, Rodrigo Ledesma-Amaro
Spontaneously established syntrophic yeast communities improve bioproduction. Nature chemical biology (2023)
Tara TeSlaa, Markus Ralser, Jing Fan, Joshua D Rabinowitz
The pentose phosphate pathway in health and disease. Nature metabolism 5 (8) (2023)
Kevin L Yang, Fengchao Yu, Guo Ci Teo, Kai Li, Vadim Demichev, Markus Ralser, Alexey I Nesvizhskii
MSBooster: improving peptide identification rates using deep learning-based features. Nature communications 14 (1) (2023)
Stephan Kamrad, Clara Correia-Melo, Lukasz Szyrwiel, Simran Kaur Aulakh, Jürg Bähler, Vadim Demichev, Michael Mülleder, Markus Ralser
Metabolic heterogeneity and cross-feeding within isogenic yeast populations captured by DILAC. Nature microbiology (2023)
Christian Kost, Kiran Raosaheb Patil, Jonathan Friedman, Sarahi L Garcia, Markus Ralser
Metabolic exchanges are ubiquitous in natural microbial communities. Nature microbiology (2023)
Markus Ralser
The cycle that sculpted evolution. Nature reviews. Chemistry (2023)
Huanhuan Gao, Youqi Liu, Vadim Demichev, Stephen Tate, Chen Chen, Jiang Zhu, Cong Lu, Markus Ralser, Tiannan Guo, Yi Zhu
Optimization of Microflow LC Coupled with Scanning SWATH and Its Application in Hepatocellular Carcinoma Tissues. Journal of proteome research 21 (7) (2022)
Christoph B Messner, Vadim Demichev, Ziyue Wang, Johannes Hartl, Georg Kustatscher, Michael Mülleder, Markus Ralser
Mass spectrometry-based high-throughput proteomics and its role in biomedical studies and systems biology. Proteomics (2022)
Jason S L Yu, Clara Correia-Melo, Francisco Zorrilla, Lucia Herrera-Dominguez, Mary Y Wu, Johannes Hartl, Kate Campbell, Sonja Blasche, Marco Kreidl, Anna-Sophia Egger, Christoph B Messner, Vadim Demichev, Anja Freiwald, Michael Mülleder, Michael Howell, Judith Berman, Kiran R Patil, Mohammad Tauqeer Alam, Markus Ralser
Microbial communities form rich extracellular metabolomes that foster metabolic interactions and promote drug tolerance. Nature microbiology 7 (4) (2022)
Vadim Demichev, Lukasz Szyrwiel, Fengchao Yu, Guo Ci Teo, George A Rosenberger, Agathe Niewienda, Daniela Ludwig, Jens Decker, Stephanie Kaspar-Schoenefeld, Kathryn S Lilley, Michael Mülleder, Alexey I Nesvizhskii, Markus Ralser
dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts. Nature communications 13 (1) (2022)
Catalina Cosovanu, Philipp Resch, Stefan Jordan, Andrea Lehmann, Markus Ralser, Vadim Farztdinov, Joachim Spranger, Michael Mülleder, Sebastian Brachs, Christian Neumann
Intestinal epithelial c-Maf expression determines enterocyte differentiation and nutrient uptake in mice. The Journal of experimental medicine 219 (12) (2022)
Ziyue Wang, Michael Mülleder, Ihor Batruch, Anjali Chelur, Kathrin Textoris-Taube, Torsten Schwecke, Johannes Hartl, Jason C Causon, Jose Castro-Perez, Vadim Demichev, Stephen Tate, Markus Ralser
High-throughput proteomics of nanogram-scale samples with Zeno SWATH MS. eLife 11 (2022)
Jason S L Yu, Benjamin M Heineike, Johannes Hartl, Simran K Aulakh, Clara Correia-Melo, Andrea Lehmann, Oliver Lemke, Federica Agostini, Cory T Lee, Vadim Demichev, Christoph B Messner, Michael Mülleder, Markus Ralser
Inorganic sulfur fixation via a new homocysteine synthase allows yeast cells to cooperatively compensate for methionine auxotrophy. PLoS biology 20 (12) (2022)
Steffen N Lindner, Markus Ralser
Synthetic metabolism without the TCA cycle. Nature metabolism 4 (11) (2022)
Georg Kustatscher, Tom Collins, Anne-Claude Gingras, Tiannan Guo, Henning Hermjakob, Trey Ideker, Kathryn S Lilley, Emma Lundberg, Edward M Marcotte, Markus Ralser, Juri Rappsilber
An open invitation to the Understudied Proteins Initiative. Nature biotechnology 40 (6) (2022)
Sreejith Jayasree Varma, Enrica Calvani, Nana-Maria Grüning, Christoph B Messner, Nicholas Grayson, Floriana Capuano, Michael Mülleder, Markus Ralser
Global analysis of cytosine and adenine DNA modifications across the tree of life. eLife 11 (2022)
Ziyue Wang, Pinkus Tober-Lau, Vadim Farztdinov, Oliver Lemke, Torsten Schwecke, Sarah Steinbrecher, Julia Muenzner, Helene Kriedemann, Leif-Erik Sander, Johannes Hartl, Michael Mülleder, Markus Ralser, Florian Kurth
The human host response to monkeypox infection: a proteomic case series study. EMBO molecular medicine 14 (11) (2022)
Martin Steger, Vadim Demichev, Mattias Backman, Uli Ohmayer, Phillip Ihmor, Stefan Müller, Markus Ralser, Henrik Daub
Time-resolved in vivo ubiquitinome profiling by DIA-MS reveals USP7 targets on a proteome-wide scale. Nature communications 12 (1) (2021)
Jakob Vowinckel, Johannes Hartl, Hans Marx, Martin Kerick, Kathrin Runggatscher, Markus A Keller, Michael Mülleder, Jason Day, Manuela Weber, Mark Rinnerthaler, Jason S L Yu, Simran Kaur Aulakh, Andrea Lehmann, Diethard Mattanovich, Bernd Timmermann, Nianshu Zhang, Cory D Dunn, James I MacRae, Michael Breitenbach, Markus Ralser
The metabolic growth limitations of petite cells lacking the mitochondrial genome. Nature metabolism 3 (11) (2021)
Gabriel Piedrafita, Sreejith Jayasree Varma, Cecilia Castro, Christoph Messner, Lukasz Szyrwiel, Julian L Griffin, Markus Ralser
Cysteine and iron accelerate the formation of ribose-5-phosphate, providing insights into the evolutionary origins of the metabolic network structure. PLoS biology 19 (12) (2021)
Christoph B Messner, Vadim Demichev, Nic Bloomfield, Jason S L Yu, Matthew White, Marco Kreidl, Anna-Sophia Egger, Anja Freiwald, Gordana Ivosev, Fras Wasim, Aleksej Zelezniak, Linda Jürgens, Norbert Suttorp, Leif-Erik Sander, Florian Kurth, Kathryn S Lilley, Michael Mülleder, Stephen Tate, Markus Ralser
Ultra-fast proteomics with Scanning SWATH. Nature biotechnology 39 (7) (2021)
Stephan Kamrad, Maria Rodriguez-Lopez, Cristina Cotobal, Clara Correia-Melo, Markus Ralser, Jürg Bähler
Pyphe, a python toolbox for assessing microbial growth and cell viability in high-throughput colony screens. eLife 9 (2020)
Fredrik Bäckhed, Elisabetta Bugianesi, Heather Christofk, Ivan Dikic, Rana Gupta, William B Mair, Luke A J O'Neill, Markus Ralser, David M Sabatini, Matthias Tschöp
The next decade of metabolism. Nature metabolism 1 (1) (2020)
Jing Li, Mark Rinnerthaler, Johannes Hartl, Manuela Weber, Thomas Karl, Hannelore Breitenbach-Koller, Michael Mülleder, Jakob Vowinckel, Hans Marx, Michael Sauer, Diethard Mattanovich, Özge Ata, Sonakshi De, Gregor P Greslehner, Florian Geltinger, Bill Burhans, Chris Grant, Victoria Doronina, Meryem Ralser, Maria Karolin Streubel, Christian Grabner, Stefanie Jarolim, Claudia Moßhammer, Campbell W Gourlay, Jiri Hasek, Paul J Cullen, Gianni Liti, Markus Ralser, Michael Breitenbach
Slow Growth and Increased Spontaneous Mutation Frequency in Respiratory Deficient afo1 - Yeast Suppressed by a Dominant Mutation in ATP3. G3 (Bethesda, Md.) 10 (12) (2020)
Vadim Demichev, Christoph B Messner, Spyros I Vernardis, Kathryn S Lilley, Markus Ralser
DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput. Nature methods 17 (1) (2019)
Sivan Kaminski Strauss, Dvir Schirman, Ghil Jona, Aaron N Brooks, Aditya M Kunjapur, Alex N Nguyen Ba, Alice Flint, Andras Solt, Andreas Mershin, Atray Dixit, Avihu H Yona, Bálint Csörgő, Bede Phillip Busby, Bianca P Hennig, Csaba Pál, Daniel Schraivogel, Daniel Schultz, David G Wernick, Deepa Agashe, Dikla Levi, Dmitry Zabezhinsky, Dor Russ, Ehud Sass, Einat Tamar, Elad Herz, Emmanuel D Levy, George M Church, Idan Yelin, Iftach Nachmann, Jeffrey E Gerst, Joseph M Georgeson, Katarzyna P Adamala, Lars M Steinmetz, Marc Rübsam, Markus Ralser, Michael Klutstein, Michael M Desai, Nilima Walunjkar, Ning Yin, Noa Aharon Hefetz, Noah Jakimo, Olga Snitser, Omri Adini, Prashant Kumar, Rachel Soo Hoo Smith, Razi Zeidan, Ronen Hazan, Roni Rak, Roy Kishony, Shannon Johnson, Shira Nouriel, Sibylle C Vonesch, Simmie Foster, Tal Dagan, Tanita Wein, Thrasyvoulos Karydis, Timothy M Wannier, Timothy Stiles, Viridiana Olin-Sandoval, William F Mueller, Yinon M Bar-On, Orna Dahan, Yitzhak Pilpel
Evolthon: A community endeavor to evolve lab evolution. PLoS biology 17 (3) (2019)
Joanna Segal, Michael Mülleder, Antje Krüger, Thure Adler, Manuela Scholze-Wittler, Lore Becker, Julia Calzada-Wack, Lillian Garrett, Sabine M Hölter, Birgit Rathkolb, Jan Rozman, Ildiko Racz, Ralf Fischer, Dirk H Busch, Frauke Neff, Martin Klingenspor, Thomas Klopstock, Nana-Maria Grüning, Steve Michel, Beata Lukaszewska-McGreal, Ingo Voigt, Ludger Hartmann, Bernd Timmermann, Hans Lehrach, Eckhard Wolf, Wolfgang Wurst, Valérie Gailus-Durner, Helmut Fuchs, Martin H de Angelis, Heinrich Schrewe, Mariia Yuneva, Markus Ralser
Low catalytic activity is insufficient to induce disease pathology in triosephosphate isomerase deficiency. Journal of inherited metabolic disease 42 (5) (2019)
Markus Ralser
An appeal to magic? The discovery of a non-enzymatic metabolism and its role in the origins of life. The Biochemical journal 475 (16) (2018)
Jakob Vowinckel, Aleksej Zelezniak, Roland Bruderer, Michael Mülleder, Lukas Reiter, Markus Ralser
Cost-effective generation of precise label-free quantitative proteomes in high-throughput by microLC and data-independent acquisition. Scientific reports 8 (1) (2018)
Rita Gemayel, Yudi Yang, Maria C Dzialo, Jacek Kominek, Jakob Vowinckel, Veerle Saels, Leen Van Huffel, Elisa van der Zande, Markus Ralser, Jan Steensels, Karin Voordeckers, Kevin J Verstrepen
Variable repeats in the eukaryotic polyubiquitin gene ubi4 modulate proteostasis and stress survival. Nature communications 8 (1) (2017)
Mohammad Tauqeer Alam, Viridiana Olin-Sandoval, Anna Stincone, Markus A Keller, Aleksej Zelezniak, Ben F Luisi, Markus Ralser
The self-inhibitory nature of metabolic networks and its alleviation through compartmentalization. Nature communications 8 (2017)
Christoph B Messner, Paul C Driscoll, Gabriel Piedrafita, Michael F L De Volder, Markus Ralser
Nonenzymatic gluconeogenesis-like formation of fructose 1,6-bisphosphate in ice. Proceedings of the National Academy of Sciences of the United States of America 114 (28) (2017)
Emma Watson, Viridiana Olin-Sandoval, Michael J Hoy, Chi-Hua Li, Timo Louisse, Victoria Yao, Akihiro Mori, Amy D Holdorf, Olga G Troyanskaya, Markus Ralser, Albertha J M Walhout
Metabolic network rewiring of propionate flux compensates vitamin B12 deficiency in C. elegans. eLife 5 (2016)
Markus Andreas Keller, Andre Zylstra, Cecilia Castro, Alexandra V Turchyn, Julian L Griffin, Markus Ralser
Conditional iron and pH-dependent activity of a non-enzymatic glycolysis and pentose phosphate pathway. Science advances 2 (1) (2016)
Daniel Charlton Jeffares, Charalampos Rallis, Adrien Rieux, Doug Speed, Martin Převorovský, Tobias Mourier, Francesc X Marsellach, Zamin Iqbal, Winston Lau, Tammy M K Cheng, Rodrigo Pracana, Michael Mülleder, Jonathan L D Lawson, Anatole Chessel, Sendu Bala, Garrett Hellenthal, Brendan O'Fallon, Thomas Keane, Jared T Simpson, Leanne Bischof, Bartlomiej Tomiczek, Danny A Bitton, Theodora Sideri, Sandra Codlin, Josephine E E U Hellberg, Laurent van Trigt, Linda Jeffery, Juan-Juan Li, Sophie Atkinson, Malte Thodberg, Melanie Febrer, Kirsten McLay, Nizar Drou, William Brown, Jacqueline Hayles, Rafael E Carazo Salas, Markus Ralser, Nikolas Maniatis, David Joseph Balding, Francois Balloux, Richard Durbin, Jürg Bähler
The genomic and phenotypic diversity of Schizosaccharomyces pombe. Nature genetics 47 (3) (2015)
Kate Campbell, Jakob Vowinckel, Michael Mülleder, Silke Malmsheimer, Nicola Lawrence, Enrica Calvani, Leonor Miller-Fleming, Mohammad T Alam, Stefan Christen, Markus A Keller, Markus Ralser
Self-establishing communities enable cooperative metabolite exchange in a eukaryote. eLife 4 (2015)

Markus Ralser.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Markus Ralser