Nancy R Zhang (Nancy Zhang)

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 22

Top Topics

Genome Wide Association

Basal Cell Carcinoma

Top Venues

bioRxiv : the preprint server for biology

Science (New York, N.Y.)

Nature biotechnology

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Divij Mathew, Melina E Marmarelis, Caitlin Foley, Joshua M Bauml, Darwin Ye, Reem Ghinnagow, Shin Foong Ngiow, Max Klapholz, Soyeong Jun, Zhaojun Zhang, Robert Zorc, Christiana W Davis, Maximillian Diehn, Josephine R Giles, Alexander C Huang, Wei-Ting Hwang, Nancy R Zhang, Adam J Schoenfeld, Erica L Carpenter, Corey J Langer, E John Wherry, Andy J Minn
Combined JAK inhibition and PD-1 immunotherapy for non-small cell lung cancer patients. Science (New York, N.Y.) 384 (6702) (2024)
Divij Mathew, Melina E Marmarelis, Caitlin Foley, Joshua M Bauml, Darwin Ye, Reem Ghinnagow, Shin Foong Ngiow, Max Klapholz, Soyeong Jun, Zhaojun Zhang, Robert Zorc, Christiana W Davis, Maximillian Diehn, Josephine R Giles, Alexander C Huang, Wei-Ting Hwang, Nancy R Zhang, Adam J Schoenfeld, Erica L Carpenter, Corey J Langer, E John Wherry, Andy J Minn
Combined JAK inhibition and PD-1 immunotherapy for non-small cell lung cancer patients. Science (New York, N.Y.) 384 (6702) (2024)
Divij Mathew, Melina E Marmarelis, Caitlin Foley, Joshua M Bauml, Darwin Ye, Reem Ghinnagow, Shin Foong Ngiow, Max Klapholz, Soyeong Jun, Zhaojun Zhang, Robert Zorc, Christiana W Davis, Maximillian Diehn, Josephine R Giles, Alexander C Huang, Wei-Ting Hwang, Nancy R Zhang, Adam J Schoenfeld, Erica L Carpenter, Corey J Langer, E John Wherry, Andy J Minn
Combined JAK inhibition and PD-1 immunotherapy for non-small cell lung cancer patients. Science (New York, N.Y.) 384 (6702) (2024)
Divij Mathew, Melina E Marmarelis, Caitlin Foley, Joshua M Bauml, Darwin Ye, Reem Ghinnagow, Shin Foong Ngiow, Max Klapholz, Soyeong Jun, Zhaojun Zhang, Robert Zorc, Christiana W Davis, Maximillian Diehn, Josephine R Giles, Alexander C Huang, Wei-Ting Hwang, Nancy R Zhang, Adam J Schoenfeld, Erica L Carpenter, Corey J Langer, E John Wherry, Andy J Minn
Combined JAK inhibition and PD-1 immunotherapy for non-small cell lung cancer patients. Science (New York, N.Y.) 384 (6702) (2024)
Kevin Z Lin, Nancy R Zhang
Quantifying common and distinct information in single-cell multimodal data with Tilted Canonical Correlation Analysis. Proceedings of the National Academy of Sciences of the United States of America 120 (32) (2023)
Kai Tan, Jason Xu, Changya Chen, Tiffaney Vincent, Petri Polonen, Jianzhong Hu, Satoshi Yoshimura, Wenbao Yu, Jonathan Sussman, Chia-Hui Chen, Elizabeth Li, Caroline Diorio, Rawan Shraim, Haley Newman, Lahari Uppuluri, Alexander Li, Gregory Chen, Shovik Bandyopadhyay, David Wu, Yang-Yang Ding, Jessica Xu, Tristan Lim, Miles Hsu, Anusha Thadi, Kyung Jin Ahn, Chi-Yun Wu, Jacqueline Peng, Yusha Sun, Alice Wang, Rushabh Mehta, David Frank, Lauren Meyer, Mignon Loh, Elizabeth Raetz, Zhiguo Chen, Brent Wood, Meenakshi Devidas, Kimberly Dunsmore, Stuart Winter, Ti-Cheng Chang, Gang Wu, Stanley B Pounds, Nancy R Zhang, William Carroll, Stephen Hunger, Kathrin Bernt, Jun J Yang, Charles G Mullighan, David Teachey
Identification and targeting of treatment resistant progenitor populations in T-cell Acute Lymphoblastic Leukemia. Research square (2023)
Shuxiao Chen, Bokai Zhu, Sijia Huang, John W Hickey, Kevin Z Lin, Michael Paul Snyder, William J Greenleaf, Garry P Nolan, Nancy R Zhang, Zongming Ma
Integration of spatial and single-cell data across modalities with weakly linked features. Nature biotechnology (2023)
Rodrigo A Gier, Raúl A Reyes Hueros, Jiazhen Rong, Maureen DeMarshall, Tatiana A Karakasheva, Amanda B Muir, Gary W Falk, Nancy R Zhang, Sydney M Shaffer
Clonal cell states link Barrett's esophagus and esophageal adenocarcinoma. bioRxiv : the preprint server for biology (2023)
Rodrigo A Gier, Raúl A Reyes Hueros, Jiazhen Rong, Maureen DeMarshall, Tatiana A Karakasheva, Amanda B Muir, Gary W Falk, Nancy R Zhang, Sydney M Shaffer
Clonal cell states link Barrett's esophagus and esophageal adenocarcinoma. bioRxiv : the preprint server for biology (2023)
John W Hickey, Winston R Becker, Stephanie A Nevins, Aaron Horning, Almudena Espin Perez, Chenchen Zhu, Bokai Zhu, Bei Wei, Roxanne Chiu, Derek C Chen, Daniel L Cotter, Edward D Esplin, Annika K Weimer, Chiara Caraccio, Vishal Venkataraaman, Christian M Schürch, Sarah Black, Maria Brbic, Kaidi Cao, Shuxiao Chen, Weiruo Zhang, Emma Monte, Nancy R Zhang, Zongming Ma, Jure Leskovec, Zhengyan Zhang, Shin Lin, Teri Longacre, Sylvia K Plevritis, Yiing Lin, Garry P Nolan, William J Greenleaf, Michael Paul Snyder
Organization of the human intestine at single-cell resolution. Nature 619 (7970) (2023)
Rodrigo A Gier, Raúl A Reyes Hueros, Jiazhen Rong, Maureen DeMarshall, Tatiana A Karakasheva, Amanda B Muir, Gary W Falk, Nancy R Zhang, Sydney M Shaffer
Clonal cell states link Barrett's esophagus and esophageal adenocarcinoma. bioRxiv : the preprint server for biology (2023)
Rodrigo A Gier, Raúl A Reyes Hueros, Jiazhen Rong, Maureen DeMarshall, Tatiana A Karakasheva, Amanda B Muir, Gary W Falk, Nancy R Zhang, Sydney M Shaffer
Clonal cell states link Barrett's esophagus and esophageal adenocarcinoma. bioRxiv : the preprint server for biology (2023)
Nancy R Zhang, Yuntian Fu, Heonseok Kim, Jenea Imani Adams, Susan M Grimes, Sijia Huang, Billy Lau, Anuja Sathe, Paul Hess, Hanlee Ji
Single cell and spatial alternative splicing analysis with long read sequencing. Research square (2023)
Anuja Sathe, Kaishu Mason, Susan M Grimes, Zilu Zhou, Billy T Lau, Xiangqi Bai, Andrew Su, Xiao Tan, HoJoon Lee, Carlos J Suarez, Quan H Nguyen, George Poultsides, Nancy R Zhang, Hanlee P Ji
Colorectal cancer metastases in the liver establish immunosuppressive spatial networking between tumor associated SPP1+ macrophages and fibroblasts. Clinical cancer research : an official journal of the American Association for Cancer Research (2022)
Chi-Yun Wu, Billy T Lau, Heon Seok Kim, Anuja Sathe, Susan M Grimes, Hanlee P Ji, Nancy R Zhang
Integrative single-cell analysis of allele-specific copy number alterations and chromatin accessibility in cancer. Nature biotechnology 39 (10) (2021)
Jingshu Wang, Qingyuan Zhao, Jack Bowden, Gibran Hemani, George Davey Smith, Dylan S Small, Nancy R Zhang
Causal inference for heritable phenotypic risk factors using heterogeneous genetic instruments. PLoS genetics 17 (6) (2021)
Son Nguyen, Claire Deleage, Samuel W Darko, Amy Ransier, Duc P Truong, Divyansh Agarwal, Alberto Sada Japp, Vincent H Wu, Leticia Kuri-Cervantes, Mohamed Abdel-Mohsen, Perla Mariana Del Río-Estrada, Yuria Ablanedo-Terrazas, Emma Gostick, James A Hoxie, Nancy R Zhang, Ali Naji, Gustavo Reyes-Terán, Jacob D Estes, David A Price, Daniel C Douek, Steven G Deeks, Marcus Buggert, Michael R Betts
Elite control of HIV is associated with distinct functional and transcriptional signatures in lymphoid tissue CD8+ T cells. Science translational medicine 11 (523) (2020)
Zilu Zhou, Bihui Xu, Andy Minn, Nancy R Zhang
DENDRO: genetic heterogeneity profiling and subclone detection by single-cell RNA sequencing. Genome biology 21 (1) (2020)
Zilu Zhou, Chengzhong Ye, Jingshu Wang, Nancy R Zhang
Surface protein imputation from single cell transcriptomes by deep neural networks. Nature communications 11 (1) (2020)
Xuran Wang, Jiwhan Park, Katalin Susztak, Nancy R Zhang, Mingyao Li
Bulk tissue cell type deconvolution with multi-subject single-cell expression reference. Nature communications 10 (1) (2019)
Divyansh Agarwal, Nancy R Zhang
Semblance: An empirical similarity kernel on probability spaces. Science advances 5 (12) (2019)
Jingshu Wang, Divyansh Agarwal, Mo Huang, Gang Hu, Zilu Zhou, Chengzhong Ye, Nancy R Zhang
Data denoising with transfer learning in single-cell transcriptomics. Nature methods 16 (9) (2019)