Prashant Mali

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 32

Top Venues

Nature

Cancer research communications

Nature biomedical engineering

bioRxiv : the preprint server for biology

University of California San Diego

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California San Diego

United States

Assistant Professor :: Bioengineering

Publications

Michael Tong, Nathan Palmer, Amir Dailamy, Aditya Kumar, Hammza Khaliq, Sangwoo Han, Emma Finburgh, Madeleine Wing, Camilla Hong, Yichen Xiang, Katelyn Miyasaki, Andrew Portell, Joseph Rainaldi, Amanda Suhardjo, Sami Nourreddine, Wei Leong Chew, Ester J Kwon, Prashant Mali
Robust genome and cell engineering via in vitro and in situ circularized RNAs. Nature biomedical engineering (2024)
Yusuke Goto, Keiichi Koshizuka, Toshinori Ando, Hiroki Izumi, Xingyu Wu, Kuniaki Sato, Tomohiko Ishikawa, Kyle Ford, Xiaodong Feng, Zhiyong Wang, Nadia Arang, Michael M Allevato, Ayush Kishore, Prashant Mali, Jorge Silvio Gutkind
A Kinome-Wide Synthetic Lethal CRISPR/Cas9 Screen Reveals That mTOR Inhibition Prevents Adaptive Resistance to CDK4/CDK6 Blockade in HNSCC. Cancer research communications 4 (7) (2024)
Andrew Portell, Prashant Mali
Mutation corrections in spinal muscular atrophy. Nature biomedical engineering 8 (2) (2024)
Yusuke Goto, Keiichi Koshizuka, Toshinori Ando, Hiroki Izumi, Xingyu Wu, Kuniaki Sato, Tomohiko Ishikawa, Kyle Ford, Xiaodong Feng, Zhiyong Wang, Nadia Arang, Michael M Allevato, Ayush Kishore, Prashant Mali, Jorge Silvio Gutkind
A Kinome-Wide Synthetic Lethal CRISPR/Cas9 Screen Reveals That mTOR Inhibition Prevents Adaptive Resistance to CDK4/CDK6 Blockade in HNSCC. Cancer research communications 4 (7) (2024)
Timothy W Clark, Jillian Mohan, Michael R Shortreed, Kirsten Obernier, Mohammad Sadnan Al Manir, Christopher P Churas, Amir Dailamy, Yesh Doctor, Antoine Forget, Jan Niklas Hansen, Mengzhou Hu, Joanna Lenkiewicz, Maxwell Adam Levinson, Charlotte Marquez, Sami Nourreddine, Justin Niestroy, Dexter Pratt, Gege Qian, Swathi Thaker, Jean-Christophe Bélisle-Pipon, Cynthia A Brandt, Jake Chen, Ying Ding, Samah Jamal Fodeh, Nevan J Krogan, Emma Lundberg, Prashant Mali, Pamela Payne-Foster, Sarah Jane Ratcliffe, Vardit Ravitsky, Andrej Sali, Wade L Schulz, Trey Ideker
Cell Maps for Artificial Intelligence: AI-Ready Maps of Human Cell Architecture from Disease-Relevant Cell Lines. bioRxiv : the preprint server for biology (2024)
Timothy W Clark, Jillian Mohan, Michael R Shortreed, Kirsten Obernier, Mohammad Sadnan Al Manir, Christopher P Churas, Amir Dailamy, Yesh Doctor, Antoine Forget, Jan Niklas Hansen, Mengzhou Hu, Joanna Lenkiewicz, Maxwell Adam Levinson, Charlotte Marquez, Sami Nourreddine, Justin Niestroy, Dexter Pratt, Gege Qian, Swathi Thaker, Jean-Christophe Bélisle-Pipon, Cynthia A Brandt, Jake Chen, Ying Ding, Samah Jamal Fodeh, Nevan J Krogan, Emma Lundberg, Prashant Mali, Pamela Payne-Foster, Sarah Jane Ratcliffe, Vardit Ravitsky, Andrej Sali, Wade L Schulz, Trey Ideker
Cell Maps for Artificial Intelligence: AI-Ready Maps of Human Cell Architecture from Disease-Relevant Cell Lines. bioRxiv : the preprint server for biology (2024)
Shankar Subramaniam, Metin Akay, Mark A Anastasio, Vasudev Bailey, David A Boas, Ashutosh Chilkoti, Jennifer R Cochran, Vicki L Colvin, Tejal A Desai, James S Duncan, Frederick H Epstein, Stephanie I Fraley, Cecilia Maria Giachelli, Kathryn Jane Grande-Allen, Jordan J Green, Xiang-Dong Edward Guo, Isaac B Hilton, Jay D Humphrey, Chris R Johnson, George Em Karniadakis, Michael R King, Robert F Kirsch, Sanjay Kumar, Cato T Laurencin, Song Li, Richard L Lieber, Nigel H Lovell, Prashant Mali, Stephanie A Pasquesi, David F Meaney, Brenda M Ogle, Bernhard O Palsson, Nicholas A Peppas, Eric J Perreault, Richard D Rabbitt, Lori A Setton, Lonnie D Shea, Sanjeev G Shroff, Kirk Shung, Andreas Savas Tolias, Marjolein C H van der Meulen, Shyni Varghese, Gordana Vunjak-Novakovic, John A White, Raimond L Winslow, Jianyi Jay Zhang, Kun Zhang, Charles Zukoski
Grand Challenges at the Interface of Engineering and Medicine. IEEE open journal of engineering in medicine and biology 5 (2024)
Yusuke Goto, Keiichi Koshizuka, Toshinori Ando, Hiroki Izumi, Xingyu Wu, Kuniaki Sato, Tomohiko Ishikawa, Kyle Ford, Xiaodong Feng, Zhiyong Wang, Nadia Arang, Michael M Allevato, Ayush Kishore, Prashant Mali, Jorge Silvio Gutkind
A Kinome-Wide Synthetic Lethal CRISPR/Cas9 Screen Reveals That mTOR Inhibition Prevents Adaptive Resistance to CDK4/CDK6 Blockade in HNSCC. Cancer research communications 4 (7) (2024)
Timothy W Clark, Jillian Mohan, Michael R Shortreed, Kirsten Obernier, Mohammad Sadnan Al Manir, Christopher P Churas, Amir Dailamy, Yesh Doctor, Antoine Forget, Jan Niklas Hansen, Mengzhou Hu, Joanna Lenkiewicz, Maxwell Adam Levinson, Charlotte Marquez, Sami Nourreddine, Justin Niestroy, Dexter Pratt, Gege Qian, Swathi Thaker, Jean-Christophe Bélisle-Pipon, Cynthia A Brandt, Jake Chen, Ying Ding, Samah Jamal Fodeh, Nevan J Krogan, Emma Lundberg, Prashant Mali, Pamela Payne-Foster, Sarah Jane Ratcliffe, Vardit Ravitsky, Andrej Sali, Wade L Schulz, Trey Ideker
Cell Maps for Artificial Intelligence: AI-Ready Maps of Human Cell Architecture from Disease-Relevant Cell Lines. bioRxiv : the preprint server for biology (2024)
Yusuke Goto, Keiichi Koshizuka, Toshinori Ando, Hiroki Izumi, Xingyu Wu, Kuniaki Sato, Tomohiko Ishikawa, Kyle Ford, Xiaodong Feng, Zhiyong Wang, Nadia Arang, Michael M Allevato, Ayush Kishore, Prashant Mali, Jorge Silvio Gutkind
A Kinome-Wide Synthetic Lethal CRISPR/Cas9 Screen Reveals That mTOR Inhibition Prevents Adaptive Resistance to CDK4/CDK6 Blockade in HNSCC. Cancer research communications 4 (7) (2024)
Yusuke Goto, Keiichi Koshizuka, Toshinori Ando, Hiroki Izumi, Xingyu Wu, Kuniaki Sato, Tomohiko Ishikawa, Kyle Ford, Xiaodong Feng, Zhiyong Wang, Nadia Arang, Michael M Allevato, Ayush Kishore, Prashant Mali, Jorge Silvio Gutkind
A kinome-wide synthetic lethal CRISPR/Cas9 screen reveals that mTOR inhibition prevents adaptive resistance to CDK4/CDK6 blockade in HNSCC. Cancer research communications (2024)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature (2023)
Aditya Kumar, Starry He, Prashant Mali
Systematic discovery of transcription factors that improve hPSC-derived cardiomyocyte maturation via temporal analysis of bioengineered cardiac tissues. APL bioengineering 7 (2) (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature 614 (7946) (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature 614 (7946) (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature (2023)
Andrew Portell, Prashant Mali
Mutation corrections in spinal muscular atrophy. Nature biomedical engineering (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature 614 (7946) (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature 614 (7946) (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature 614 (7946) (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature 614 (7946) (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature 614 (7946) (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature 614 (7946) (2023)
Michal K Handzlik, Jivani M Gengatharan, Katie E Frizzi, Grace H McGregor, Cameron Martino, Gibraan Rahman, Antonio Gonzalez, Ana M Moreno, Courtney R Green, Lucie S Guernsey, Terry Lin, Patrick Tseng, Yoichiro Ideguchi, Regis J Fallon, Amandine Chaix, Satchidananda Panda, Prashant Mali, Martina Wallace, Rob Knight, Marin L Gantner, Nigel A Calcutt, Christian M Metallo
Insulin-regulated serine and lipid metabolism drive peripheral neuropathy. Nature 614 (7946) (2023)
Dhruva Katrekar, James Yen, Yichen Xiang, Anushka Saha, Dario Meluzzi, Yiannis Savva, Prashant Mali
Efficient in vitro and in vivo RNA editing via recruitment of endogenous ADARs using circular guide RNAs. Nature biotechnology 40 (6) (2022)
Dhruva Katrekar, Yichen Xiang, Nathan D Palmer, Anushka Saha, Dario Meluzzi, Prashant Mali
Comprehensive interrogation of the ADAR2 deaminase domain for engineering enhanced RNA editing activity and specificity. eLife 11 (2022)
Ana M Moreno, Fernando Aleman, Glaucilene F Catroli, Matthew A Hunt, Michael Hu, Amir Dailamy, Andrew Pla, Sarah A Woller, Nathan D Palmer, Udit Parekh, Daniella McDonald, Amanda J Roberts, Vanessa Goodwill, Ian Dryden, Robert F Hevner, Lauriane Delay, Gilson Gonçalves Dos Santos, Tony L Yaksh, Prashant Mali
Long-lasting analgesia via targeted in situ repression of NaV1.7 in mice. Science translational medicine 13 (584) (2021)
Ana M Moreno, Nathan D Palmer, Fernando Alemán, Genghao Chen, Andrew Pla, Ning Jiang, Wei Leong Chew, Mansun Law, Prashant Mali
Immune-orthogonal orthologues of AAV capsids and of Cas9 circumvent the immune response to the administration of gene therapy. Nature biomedical engineering 3 (10) (2019)
Genghao Chen, Dhruva Katrekar, Prashant Mali
RNA-Guided Adenosine Deaminases: Advances and Challenges for Therapeutic RNA Editing. Biochemistry 58 (15) (2019)
Dhruva Katrekar, Genghao Chen, Dario Meluzzi, Ashwin Ganesh, Atharv Worlikar, Yu-Ru Shih, Shyni Varghese, Prashant Mali
In vivo RNA editing of point mutations via RNA-guided adenosine deaminases. Nature methods 16 (3) (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Prashant Mali