Tomohiro Nishizawa

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 34

Top Topics

Structural Basis

Electron Microscopy

Top Venues

Nature communications

Nature structural & molecular biology

Science advances

This page only lists publications with an associated author ORCID identifier.

Publications

Katsuya Takahashi, Yongchan Lee, Angela Fago, Naim M Bautista, Jay F Storz, Akihiro Kawamoto, Genji Kurisu, Tomohiro Nishizawa, Jeremy R H Tame
The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM. Nature communications 15 (1) (2024)
Shuhei Onishi, Kotone Uchiyama, Ko Sato, Chikako Okada, Shunsuke Kobayashi, Keisuke Hamada, Tomohiro Nishizawa, Osamu Nureki, Kazuhiro Ogata, Toru Sengoku
Structure of the human Bre1 complex bound to the nucleosome. Nature communications 15 (1) (2024)
Airi Jo-Watanabe, Toshiki Inaba, Takahiro Osada, Ryota Hashimoto, Tomohiro Nishizawa, Toshiaki Okuno, Sayoko Ihara, Kazushige Touhara, Nobutaka Hattori, Masatsugu Oh-Hora, Osamu Nureki, Takehiko Yokomizo
Bicarbonate signalling via G protein-coupled receptor regulates ischaemia-reperfusion injury. Nature communications 15 (1) (2024)
Shuhei Onishi, Kotone Uchiyama, Ko Sato, Chikako Okada, Shunsuke Kobayashi, Keisuke Hamada, Tomohiro Nishizawa, Osamu Nureki, Kazuhiro Ogata, Toru Sengoku
Structure of the human Bre1 complex bound to the nucleosome. Nature communications 15 (1) (2024)
Shuhei Onishi, Kotone Uchiyama, Ko Sato, Chikako Okada, Shunsuke Kobayashi, Keisuke Hamada, Tomohiro Nishizawa, Osamu Nureki, Kazuhiro Ogata, Toru Sengoku
Structure of the human Bre1 complex bound to the nucleosome. Nature communications 15 (1) (2024)
Airi Jo-Watanabe, Toshiki Inaba, Takahiro Osada, Ryota Hashimoto, Tomohiro Nishizawa, Toshiaki Okuno, Sayoko Ihara, Kazushige Touhara, Nobutaka Hattori, Masatsugu Oh-Hora, Osamu Nureki, Takehiko Yokomizo
Bicarbonate signalling via G protein-coupled receptor regulates ischaemia-reperfusion injury. Nature communications 15 (1) (2024)
Airi Jo-Watanabe, Toshiki Inaba, Takahiro Osada, Ryota Hashimoto, Tomohiro Nishizawa, Toshiaki Okuno, Sayoko Ihara, Kazushige Touhara, Nobutaka Hattori, Masatsugu Oh-Hora, Osamu Nureki, Takehiko Yokomizo
Bicarbonate signalling via G protein-coupled receptor regulates ischaemia-reperfusion injury. Nature communications 15 (1) (2024)
Katsuya Takahashi, Yongchan Lee, Angela Fago, Naim M Bautista, Jay F Storz, Akihiro Kawamoto, Genji Kurisu, Tomohiro Nishizawa, Jeremy R H Tame
The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM. Nature communications 15 (1) (2024)
Katsuya Takahashi, Yongchan Lee, Angela Fago, Naim M Bautista, Jay F Storz, Akihiro Kawamoto, Genji Kurisu, Tomohiro Nishizawa, Jeremy R H Tame
The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM. Nature communications 15 (1) (2024)
Victoria C Young, Hanayo Nakanishi, Dylan J Meyer, Tomohiro Nishizawa, Atsunori Oshima, Pablo Artigas, Kazuhiro Abe
Structure and function of H + /K + pump mutants reveal Na + /K + pump mechanisms. Nature communications 13 (1) (2022)
Jae-Hyun Park, Masashi Iwamoto, Ji-Hye Yun, Tomomi Uchikubo-Kamo, Donghwan Son, Zeyu Jin, Hisashi Yoshida, Mio Ohki, Naito Ishimoto, Kenji Mizutani, Mizuki Oshima, Masamichi Muramatsu, Takaji Wakita, Mikako Shirouzu, Kehong Liu, Tomoko Uemura, Norimichi Nomura, So Iwata, Koichi Watashi, Jeremy R H Tame, Tomohiro Nishizawa, Weontae Lee, Sam-Yong Park
Structural insights into the HBV receptor and bile acid transporter NTCP. Nature 606 (7916) (2022)
Takafumi Kato, Tsukasa Kusakizako, Chunhuan Jin, Xinyu Zhou, Ryuichi Ohgaki, LiLi Quan, Minhui Xu, Suguru Okuda, Kan Kobayashi, Keitaro Yamashita, Tomohiro Nishizawa, Yoshikatsu Kanai, Osamu Nureki
Structural insights into inhibitory mechanism of human excitatory amino acid transporter EAAT2. Nature communications 13 (1) (2022)
Haon Futamata, Masahiro Fukuda, Rie Umeda, Keitaro Yamashita, Atsuhiro Tomita, Satoe Takahashi, Takafumi Shikakura, Shigehiko Hayashi, Tsukasa Kusakizako, Tomohiro Nishizawa, Kazuaki Homma, Osamu Nureki
Cryo-EM structures of thermostabilized prestin provide mechanistic insights underlying outer hair cell electromotility. Nature communications 13 (1) (2022)
Haon Futamata, Masahiro Fukuda, Rie Umeda, Keitaro Yamashita, Atsuhiro Tomita, Satoe Takahashi, Takafumi Shikakura, Shigehiko Hayashi, Tsukasa Kusakizako, Tomohiro Nishizawa, Kazuaki Homma, Osamu Nureki
Author Correction: Cryo-EM structures of thermostabilized prestin provide mechanistic insights underlying outer hair cell electromotility. Nature communications 13 (1) (2022)
Sonomi Yamaguchi, Masahiro Naganuma, Tomohiro Nishizawa, Tsukasa Kusakizako, Yukihide Tomari, Hiroshi Nishimasu, Osamu Nureki
Structure of the Dicer-2-R2D2 heterodimer bound to a small RNA duplex. Nature 607 (7918) (2022)
Tatsuya Hagino, Takafumi Kato, Go Kasuya, Kan Kobayashi, Tsukasa Kusakizako, Shin Hamamoto, Tomoaki Sobajima, Yuichiro Fujiwara, Keitaro Yamashita, Hisashi Kawasaki, Andrés D Maturana, Tomohiro Nishizawa, Osamu Nureki
Cryo-EM structures of thylakoid-located voltage-dependent chloride channel VCCN1. Nature communications 13 (1) (2022)
Kazuki Kato, Sae Okazaki, Soumya Kannan, Han Altae-Tran, F Esra Demircioglu, Yukari Isayama, Junichiro Ishikawa, Masahiro Fukuda, Rhiannon K Macrae, Tomohiro Nishizawa, Kira S Makarova, Eugene V Koonin, Feng Zhang, Hiroshi Nishimasu
Structure of the IscB-ωRNA ribonucleoprotein complex, the likely ancestor of CRISPR-Cas9. Nature communications 13 (1) (2022)
Kazuki Kato, Sae Okazaki, Cian Schmitt-Ulms, Kaiyi Jiang, Wenyuan Zhou, Junichiro Ishikawa, Yukari Isayama, Shungo Adachi, Tomohiro Nishizawa, Kira S Makarova, Eugene V Koonin, Omar O Abudayyeh, Jonathan Samuel Gootenberg, Hiroshi Nishimasu
RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease. Science (New York, N.Y.) 378 (6622) (2022)
Hiroyuki H Okamoto, Hirotake Miyauchi, Asuka Inoue, Francesco Raimondi, Hirokazu Tsujimoto, Tsukasa Kusakizako, Wataru Shihoya, Keitaro Yamashita, Ryoji Suno, Norimichi Nomura, Takuya Kobayashi, So Iwata, Tomohiro Nishizawa, Osamu Nureki
Cryo-EM structure of the human MT1-Gi signaling complex. Nature structural & molecular biology 28 (8) (2021)
Ko Sato, Amarjeet Kumar, Keisuke Hamada, Chikako Okada, Asako Oguni, Ayumi Machiyama, Shun Sakuraba, Tomohiro Nishizawa, Osamu Nureki, Hidetoshi Kono, Kazuhiro Ogata, Toru Sengoku
Structural basis of the regulation of the normal and oncogenic methylation of nucleosomal histone H3 Lys36 by NSD2. Nature communications 12 (1) (2021)
Hanako Ishida, Jinta Asami, Zhikuan Zhang, Tomohiro Nishizawa, Hideki Shigematsu, Umeharu Ohto, Toshiyuki Shimizu
Cryo-EM structures of Toll-like receptors in complex with UNC93B1. Nature structural & molecular biology 28 (2) (2021)
Yoshiaki Kise, Go Kasuya, Hiroyuki H Okamoto, Daichi Yamanouchi, Kan Kobayashi, Tsukasa Kusakizako, Tomohiro Nishizawa, Koichi Nakajo, Osamu Nureki
Structural basis of gating modulation of Kv4 channel complexes. Nature 599 (7883) (2021)
Hironori Takeda, Akihisa Tsutsumi, Tomohiro Nishizawa, Caroline Lindau, Jon V Busto, Lena-Sophie Wenz, Lars Ellenrieder, Kenichiro Imai, Sebastian P Straub, Waltraut Mossmann, Jian Qiu, Yu Yamamori, Kentaro Tomii, Junko Suzuki, Takeshi Murata, Satoshi Ogasawara, Osamu Nureki, Thomas Becker, Nikolaus Pfanner, Nils Wiedemann, Masahide Kikkawa, Toshiya Endo
Mitochondrial sorting and assembly machinery operates by β-barrel switching. Nature 590 (7844) (2021)
Kazumasa Oda, Takashi Nomura, Takanori Nakane, Keitaro Yamashita, Keiichi Inoue, Shota Ito, Johannes Vierock, Kunio Hirata, Andrés D Maturana, Kota Katayama, Tatsuya Ikuta, Itsuki Ishigami, Tamaki Izume, Rie Umeda, Ryuun Eguma, Satomi Oishi, Go Kasuya, Takafumi Kato, Tsukasa Kusakizako, Wataru Shihoya, Hiroto Shimada, Tomoyuki Takatsuji, Mizuki Takemoto, Reiya Taniguchi, Atsuhiro Tomita, Ryoki Nakamura, Masahiro Fukuda, Hirotake Miyauchi, Yongchan Lee, Eriko Nango, Rie Tanaka, Tomoyuki Tanaka, Michihiro Sugahara, Tetsunari Kimura, Tatsuro Shimamura, Takaaki Fujiwara, Yasuaki Yamanaka, Shigeki Owada, Yasumasa Joti, Kensuke Tono, Ryuichiro Ishitani, Shigehiko Hayashi, Hideki Kandori, Peter Hegemann, So Iwata, Minoru Kubo, Tomohiro Nishizawa, Osamu Nureki
Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin. eLife 10 (2021)
Kazumasa Oda, Yongchan Lee, Pattama Wiriyasermkul, Yoko Tanaka, Mizuki Takemoto, Keitaro Yamashita, Shushi Nagamori, Tomohiro Nishizawa, Osamu Nureki
Consensus mutagenesis approach improves the thermal stability of system xc - transporter, xCT, and enables cryo-EM analyses. Protein science : a publication of the Protein Society 29 (12) (2020)
Kazuhiro Kobayashi, Wataru Shihoya, Tomohiro Nishizawa, Francois Marie Ngako Kadji, Junken Aoki, Asuka Inoue, Osamu Nureki
Cryo-EM structure of the human PAC1 receptor coupled to an engineered heterotrimeric G protein. Nature structural & molecular biology 27 (3) (2020)
Kanae Demura, Tsukasa Kusakizako, Wataru Shihoya, Masahiro Hiraizumi, Kengo Nomura, Hiroto Shimada, Keitaro Yamashita, Tomohiro Nishizawa, Akiyuki Taruno, Osamu Nureki
Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies. Science advances 6 (29) (2020)
Hiroto Shimada, Tsukasa Kusakizako, T H Dung Nguyen, Tomohiro Nishizawa, Tomoya Hino, Makoto Tominaga, Osamu Nureki
The structure of lipid nanodisc-reconstituted TRPV3 reveals the gating mechanism. Nature structural & molecular biology 27 (7) (2020)
Rie Umeda, Yuhkoh Satouh, Mizuki Takemoto, Yoshiko Nakada-Nakura, Kehong Liu, Takeshi Yokoyama, Mikako Shirouzu, So Iwata, Norimichi Nomura, Ken Sato, Masahito Ikawa, Tomohiro Nishizawa, Osamu Nureki
Structural insights into tetraspanin CD9 function. Nature communications 11 (1) (2020)
Yuxia Zhang, Michio Inoue, Akihisa Tsutsumi, Satoshi Watanabe, Tomohiro Nishizawa, Kazuhiro Nagata, Masahide Kikkawa, Kenji Inaba
Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail. Science advances 6 (33) (2020)
Ryoki Nakamura, Tomohiro Numata, Go Kasuya, Takeshi Yokoyama, Tomohiro Nishizawa, Tsukasa Kusakizako, Takafumi Kato, Tatsuya Hagino, Naoshi Dohmae, Masato Inoue, Kengo Watanabe, Hidenori Ichijo, Masahide Kikkawa, Mikako Shirouzu, Thomas J Jentsch, Ryuichiro Ishitani, Yasunobu Okada, Osamu Nureki
Cryo-EM structure of the volume-regulated anion channel LRRC8D isoform identifies features important for substrate permeation. Communications biology 3 (1) (2020)
Yongchan Lee, Pattama Wiriyasermkul, Chunhuan Jin, Lili Quan, Ryuichi Ohgaki, Suguru Okuda, Tsukasa Kusakizako, Tomohiro Nishizawa, Kazumasa Oda, Ryuichiro Ishitani, Takeshi Yokoyama, Takanori Nakane, Mikako Shirouzu, Hitoshi Endou, Shushi Nagamori, Yoshikatsu Kanai, Osamu Nureki
Cryo-EM structure of the human L-type amino acid transporter 1 in complex with glycoprotein CD98hc. Nature structural & molecular biology 26 (6) (2019)
Takafumi Kato, Kaoru Kumazaki, Miki Wada, Reiya Taniguchi, Takanori Nakane, Keitaro Yamashita, Kunio Hirata, Ryuichiro Ishitani, Koichi Ito, Tomohiro Nishizawa, Osamu Nureki
Crystal structure of plant vacuolar iron transporter VIT1. Nature plants 5 (3) (2019)
Masahiro Hiraizumi, Keitaro Yamashita, Tomohiro Nishizawa, Osamu Nureki
Cryo-EM structures capture the transport cycle of the P4-ATPase flippase. Science (New York, N.Y.) 365 (6458) (2019)