Bei-Si Xu (Beisi Xu)

ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 76

Top Venues

Nature communications

Leukemia

Science advances

The Journal of experimental medicine

St. Jude Children's Research Hospital

University of Science and Technology of China (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

St. Jude Children's Research Hospital Apr 11 2014

United States

Group Lead :: Center for Applied Bioinformatics

Education History

University of Science and Technology of China Sep 01 2003 - Jan 01 2009

China

PHD :: Polymer

Publications

Melvin E Thomas, Wenqing Qi, Michael P Walsh, Jing Ma, Tamara Westover, Sherif Abdelhamed, Lauren J Ezzell, Chandra Rolle, Emily Xiong, Wojciech Rosikiewicz, Bei-Si Xu, Allister J Loughran, Shondra M Pruett-Miller, Laura J Janke, Jeffery M Klco
Functional characterization of cooperating MGA mutations in RUNX1::RUNX1T1 acute myeloid leukemia. Leukemia 38 (5) (2024)
Victoria Honnell, Shannon Sweeney, Jacqueline L Norrie, Madison Parks, Cody A Ramirez, Asha Jacob Jannu, Bei-Si Xu, Brett Teubner, Ah Young Lee, Claire Bell, Michael A Dyer
Evolutionary conservation of VSX2 super-enhancer modules in retinal development. Development (Cambridge, England) 151 (13) (2024)
Priya Mittal, Jacquelyn A Myers, Raymond D Carter, Sandi Radko-Juettner, Hayden A Malone, Wojciech Rosikiewicz, Alexis N Robertson, Zhexin Zhu, Ishwarya V Narayanan, Baranda S Hansen, Meadow Parrish, Natarajan V Bhanu, Robert Jackson Mobley, Jerold E Rehg, Bei-Si Xu, Yiannis Drosos, Shondra M Pruett-Miller, Mats Ljungman, Benjamin A Garcia, Gang Wu, Janet F Partridge, Charles W M Roberts
PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression. Nature communications 15 (1) (2024)
Mindy K Graham, Bei-Si Xu, Christine Davis, Alan K Meeker, Christopher M Heaphy, Srinivasan Yegnasubramanian, Michael A Dyer, Maged Zeineldin
The TERT promoter is polycomb-repressed in neuroblastoma cells with long telomeres. Cancer research communications (2024)
Melvin E Thomas, Wenqing Qi, Michael P Walsh, Jing Ma, Tamara Westover, Sherif Abdelhamed, Lauren J Ezzell, Chandra Rolle, Emily Xiong, Wojciech Rosikiewicz, Bei-Si Xu, Allister J Loughran, Shondra M Pruett-Miller, Laura J Janke, Jeffery M Klco
Functional characterization of cooperating MGA mutations in RUNX1::RUNX1T1 acute myeloid leukemia. Leukemia (2024)
Melvin E Thomas, Wenqing Qi, Michael P Walsh, Jing Ma, Tamara Westover, Sherif Abdelhamed, Lauren J Ezzell, Chandra Rolle, Emily Xiong, Wojciech Rosikiewicz, Bei-Si Xu, Allister J Loughran, Shondra M Pruett-Miller, Laura J Janke, Jeffery M Klco
Functional characterization of cooperating MGA mutations in RUNX1::RUNX1T1 acute myeloid leukemia. Leukemia (2024)
Wen-Qing Yang, Jian-Yang Ge, Xiaofeng Zhang, Wen-Yu Zhu, Lin Lin, Yigong Shi, Bei-Si Xu, Ru-Juan Liu
THUMPD2 catalyzes the N2-methylation of U6 snRNA of the spliceosome catalytic center and regulates pre-mRNA splicing and retinal degeneration. Nucleic acids research 52 (6) (2024)
Minghong He, Xinying Zong, Bei-Si Xu, Wenjie Qi, Wenjun Huang, Mohamed Nadhir Djekidel, Yang Zhang, Vishwajeeth R Pagala, Jun Li, Xiaolei Hao, Clifford S Guy, Lu Bai, Richard Cross, Chunliang Li, Junmin Peng, Yongqiang Feng
Dynamic Foxp3-chromatin interaction controls tunable Treg cell function. The Journal of experimental medicine 221 (9) (2024)
Mindy K Graham, Bei-Si Xu, Christine Davis, Alan K Meeker, Christopher M Heaphy, Srinivasan Yegnasubramanian, Michael A Dyer, Maged Zeineldin
The TERT Promoter is Polycomb-Repressed in Neuroblastoma Cells with Long Telomeres. Cancer research communications 4 (6) (2024)
Priya Mittal, Jacquelyn A Myers, Raymond D Carter, Sandi Radko-Juettner, Hayden A Malone, Wojciech Rosikiewicz, Alexis N Robertson, Zhexin Zhu, Ishwarya V Narayanan, Baranda S Hansen, Meadow Parrish, Natarajan V Bhanu, Robert Jackson Mobley, Jerold E Rehg, Bei-Si Xu, Yiannis Drosos, Shondra M Pruett-Miller, Mats Ljungman, Benjamin A Garcia, Gang Wu, Janet F Partridge, Charles W M Roberts
PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression. Nature communications 15 (1) (2024)
Minghong He, Xinying Zong, Bei-Si Xu, Wenjie Qi, Wenjun Huang, Mohamed Nadhir Djekidel, Yang Zhang, Vishwajeeth R Pagala, Jun Li, Xiaolei Hao, Clifford S Guy, Lu Bai, Richard Cross, Chunliang Li, Junmin Peng, Yongqiang Feng
Dynamic Foxp3-chromatin interaction controls tunable Treg cell function. The Journal of experimental medicine 221 (9) (2024)
Mindy K Graham, Bei-Si Xu, Christine Davis, Alan K Meeker, Christopher M Heaphy, Srinivasan Yegnasubramanian, Michael A Dyer, Maged Zeineldin
The TERT Promoter is Polycomb-Repressed in Neuroblastoma Cells with Long Telomeres. Cancer research communications 4 (6) (2024)
Alex C Hughes, Brittany G Pittman, Bei-Si Xu, Jesse W Gammons, Charis M Webb, Hunter G Nolen, Phillip Chapman, Jay B Bikoff, Lindsay A Schwarz
A single-vector intersectional AAV strategy for interrogating cellular diversity and brain function. Nature neuroscience (2024)
Melvin E Thomas, Wenqing Qi, Michael P Walsh, Jing Ma, Tamara Westover, Sherif Abdelhamed, Lauren J Ezzell, Chandra Rolle, Emily Xiong, Wojciech Rosikiewicz, Bei-Si Xu, Allister J Loughran, Shondra M Pruett-Miller, Laura J Janke, Jeffery M Klco
Functional characterization of cooperating MGA mutations in RUNX1::RUNX1T1 acute myeloid leukemia. Leukemia 38 (5) (2024)
Alex C Hughes, Brittany G Pittman, Bei-Si Xu, Jesse W Gammons, Charis M Webb, Hunter G Nolen, Phillip Chapman, Jay B Bikoff, Lindsay A Schwarz
A single-vector intersectional AAV strategy for interrogating cellular diversity and brain function. Nature neuroscience (2024)
Mindy K Graham, Bei-Si Xu, Christine Davis, Alan K Meeker, Christopher M Heaphy, Srinivasan Yegnasubramanian, Michael A Dyer, Maged Zeineldin
The TERT Promoter is Polycomb-Repressed in Neuroblastoma Cells with Long Telomeres. Cancer research communications 4 (6) (2024)
Victoria Honnell, Shannon Sweeney, Jacqueline L Norrie, Madison Parks, Cody A Ramirez, Asha Jacob Jannu, Bei-Si Xu, Brett Teubner, Ah Young Lee, Claire Bell, Michael A Dyer
Evolutionary conservation of VSX2 super-enhancer modules in retinal development. Development (Cambridge, England) 151 (13) (2024)
Wen-Qing Yang, Jian-Yang Ge, Xiaofeng Zhang, Wen-Yu Zhu, Lin Lin, Yigong Shi, Bei-Si Xu, Ru-Juan Liu
THUMPD2 catalyzes the N2-methylation of U6 snRNA of the spliceosome catalytic center and regulates pre-mRNA splicing and retinal degeneration. Nucleic acids research 52 (6) (2024)
Minghong He, Xinying Zong, Bei-Si Xu, Wenjie Qi, Wenjun Huang, Mohamed Nadhir Djekidel, Yang Zhang, Vishwajeeth R Pagala, Jun Li, Xiaolei Hao, Clifford S Guy, Lu Bai, Richard Cross, Chunliang Li, Junmin Peng, Yongqiang Feng
Dynamic Foxp3-chromatin interaction controls tunable Treg cell function. The Journal of experimental medicine 221 (9) (2024)
Melvin E Thomas, Wenqing Qi, Michael P Walsh, Jing Ma, Tamara Westover, Sherif Abdelhamed, Lauren J Ezzell, Chandra Rolle, Emily Xiong, Wojciech Rosikiewicz, Bei-Si Xu, Allister J Loughran, Shondra M Pruett-Miller, Laura J Janke, Jeffery M Klco
Functional characterization of cooperating MGA mutations in RUNX1::RUNX1T1 acute myeloid leukemia. Leukemia 38 (5) (2024)
Minghong He, Xinying Zong, Bei-Si Xu, Wenjie Qi, Wenjun Huang, Mohamed Nadhir Djekidel, Yang Zhang, Vishwajeeth R Pagala, Jun Li, Xiaolei Hao, Clifford S Guy, Lu Bai, Richard Cross, Chunliang Li, Junmin Peng, Yongqiang Feng
Dynamic Foxp3-chromatin interaction controls tunable Treg cell function. The Journal of experimental medicine 221 (9) (2024)
Priya Mittal, Jacquelyn A Myers, Raymond D Carter, Sandi Radko-Juettner, Hayden A Malone, Wojciech Rosikiewicz, Alexis N Robertson, Zhexin Zhu, Ishwarya V Narayanan, Baranda S Hansen, Meadow Parrish, Natarajan V Bhanu, Robert Jackson Mobley, Jerold E Rehg, Bei-Si Xu, Yiannis Drosos, Shondra M Pruett-Miller, Mats Ljungman, Benjamin A Garcia, Gang Wu, Janet F Partridge, Charles W M Roberts
PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression. Nature communications 15 (1) (2024)
Minghong He, Xinying Zong, Bei-Si Xu, Wenjie Qi, Wenjun Huang, Mohamed Nadhir Djekidel, Yang Zhang, Vishwajeeth R Pagala, Jun Li, Xiaolei Hao, Clifford S Guy, Lu Bai, Richard Cross, Chunliang Li, Junmin Peng, Yongqiang Feng
Dynamic Foxp3-chromatin interaction controls tunable Treg cell function. The Journal of experimental medicine 221 (9) (2024)
Alex C Hughes, Brittany G Pittman, Bei-Si Xu, Jesse W Gammons, Charis M Webb, Hunter G Nolen, Phillip Chapman, Jay B Bikoff, Lindsay A Schwarz
A single-vector intersectional AAV strategy for interrogating cellular diversity and brain function. Nature neuroscience 27 (7) (2024)
Melvin E Thomas, Wenqing Qi, Michael P Walsh, Jing Ma, Tamara Westover, Sherif Abdelhamed, Lauren J Ezzell, Chandra Rolle, Emily Xiong, Wojciech Rosikiewicz, Bei-Si Xu, Allister J Loughran, Shondra M Pruett-Miller, Laura J Janke, Jeffery M Klco
Functional characterization of cooperating MGA mutations in RUNX1::RUNX1T1 acute myeloid leukemia. Leukemia 38 (5) (2024)
Victoria Honnell, Shannon Sweeney, Jacqueline L Norrie, Madison Parks, Cody A Ramirez, Asha Jacob Jannu, Bei-Si Xu, Brett Teubner, Ah Young Lee, Claire Bell, Michael A Dyer
Evolutionary conservation of VSX2 super-enhancer modules in retinal development. Development (Cambridge, England) 151 (13) (2024)
Mindy K Graham, Bei-Si Xu, Christine Davis, Alan K Meeker, Christopher M Heaphy, Srinivasan Yegnasubramanian, Michael A Dyer, Maged Zeineldin
The TERT Promoter is Polycomb-Repressed in Neuroblastoma Cells with Long Telomeres. Cancer research communications 4 (6) (2024)
Melvin E Thomas, Wenqing Qi, Michael P Walsh, Jing Ma, Tamara Westover, Sherif Abdelhamed, Lauren J Ezzell, Chandra Rolle, Emily Xiong, Wojciech Rosikiewicz, Bei-Si Xu, Allister J Loughran, Shondra M Pruett-Miller, Laura J Janke, Jeffery M Klco
Functional characterization of cooperating MGA mutations in RUNX1::RUNX1T1 acute myeloid leukemia. Leukemia 38 (5) (2024)
Victoria Honnell, Shannon Sweeney, Jacqueline L Norrie, Madison Parks, Cody A Ramirez, Asha Jacob Jannu, Bei-Si Xu, Brett Teubner, Ah Young Lee, Claire Bell, Michael A Dyer
Evolutionary conservation of VSX2 super-enhancer modules in retinal development. Development (Cambridge, England) 151 (13) (2024)
Alex C Hughes, Brittany G Pittman, Bei-Si Xu, Jesse W Gammons, Charis M Webb, Hunter G Nolen, Phillip Chapman, Jay B Bikoff, Lindsay A Schwarz
A single-vector intersectional AAV strategy for interrogating cellular diversity and brain function. Nature neuroscience 27 (7) (2024)
Wen-Qing Yang, Jian-Yang Ge, Xiaofeng Zhang, Wen-Yu Zhu, Lin Lin, Yigong Shi, Bei-Si Xu, Ru-Juan Liu
THUMPD2 catalyzes the N2-methylation of U6 snRNA of the spliceosome catalytic center and regulates pre-mRNA splicing and retinal degeneration. Nucleic acids research 52 (6) (2024)
Wen-Qing Yang, Jian-Yang Ge, Xiaofeng Zhang, Wen-Yu Zhu, Lin Lin, Yigong Shi, Bei-Si Xu, Ru-Juan Liu
THUMPD2 catalyzes the N2-methylation of U6 snRNA of the spliceosome catalytic center and regulates pre-mRNA splicing and retinal degeneration. Nucleic acids research (2024)
Myron K Evans, Yurika Matsui, Bei-Si Xu, Catherine Willis, Jennifer L Diaz, Luis Milburn, Yiping Fan, Vishwajeeth Pagala, Jamy C Peng
Author Correction: Ybx1 fine-tunes PRC2 activities to control embryonic brain development. Nature communications 14 (1) (2023)
Ruishan Wang, Akshita B Bhatt, Benjamin A Minden-Birkenmaier, Olivia K Travis, Srishti Tiwari, Hong Jia, Wojciech Rosikiewicz, Ophelie Martinot, Eleanor Childs, Robin Loesch, Guenole Tossou, Sophie Jamieson, David Finkelstein, Bei-Si Xu, Myriam Labelle
ZBTB18 restricts chromatin accessibility and prevents transcriptional adaptations that drive metastasis. Science advances 9 (1) (2023)
Victoria Honnell, Shannon Sweeney, Jacqueline L Norrie, Cody A Ramirez, Bei-Si Xu, Brett Teubner, Ah Young Lee, Claire Bell, Michael A Dyer
Identification of Evolutionarily Conserved VSX2 Enhancers in Retinal Development. bioRxiv : the preprint server for biology (2023)
Jennifer L Kamens, Stephanie Nance, Cary Koss, Bei-Si Xu, Anitria Cotton, Jeannie W Lam, Elizabeth A R Garfinkle, Pratima Nallagatla, Amelia M R Smith, Sharnise Mitchell, Jing Ma, Duane Currier, Charlie Wright, Kanisha Kavdia, Vishwajeeth R Pagala, Wonil Kim, LaShanale M Wallace, Ji-Hoon Cho, Yiping Fan, Aman Seth, Nathaniel Twarog, John Kim Choi, Esther A Obeng, Mark E Hatley, Monika L Metzger, Hiroto Inaba, Sima Jeha, Jeffrey E Rubnitz, Junmin Peng, Taosheng Chen, Anang A Shelat, R Kiplin Guy, Tanja A Grüber
Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia. Nature communications 14 (1) (2023)
Ruishan Wang, Akshita B Bhatt, Benjamin A Minden-Birkenmaier, Olivia K Travis, Srishti Tiwari, Hong Jia, Wojciech Rosikiewicz, Ophelie Martinot, Eleanor Childs, Robin Loesch, Guenole Tossou, Sophie Jamieson, David Finkelstein, Bei-Si Xu, Myriam Labelle
ZBTB18 restricts chromatin accessibility and prevents transcriptional adaptations that drive metastasis. Science advances 9 (1) (2023)
Juan Martin Barajas, Milad Rasouli, Masayuki Umeda, Ryan Lea Hiltenbrand, Sherif Abdelhamed, Rebecca Mohnani, Bright Arthur, Tamara Westover, Melvin E Thomas, Mohieddin Jafari, Laura J Janke, Bei-Si Xu, Ti-Cheng Chang, Wojciech Rosikiewicz, Emily Xiong, Chandra Rolle, Jonathan Low, Reethu Krishnan, Guangchun Song, Michael P Walsh, Jing J Ma, Jeffrey E Rubnitz, Ilaria Iacobucci, Taosheng Chen, Anja Krippner-Heidenreich, Christian Michel Zwaan, Olaf Heidenreich, Jeffery M Klco
Acute myeloid leukemias with UBTF tandem duplications are sensitive to Menin inhibitors. Blood (2023)
Jennifer L Kamens, Stephanie Nance, Cary Koss, Bei-Si Xu, Anitria Cotton, Jeannie W Lam, Elizabeth A R Garfinkle, Pratima Nallagatla, Amelia M R Smith, Sharnise Mitchell, Jing Ma, Duane Currier, Charlie Wright, Kanisha Kavdia, Vishwajeeth R Pagala, Wonil Kim, LaShanale M Wallace, Ji-Hoon Cho, Yiping Fan, Aman Seth, Nathaniel Twarog, John Kim Choi, Esther A Obeng, Mark E Hatley, Monika L Metzger, Hiroto Inaba, Sima Jeha, Jeffrey E Rubnitz, Junmin Peng, Taosheng Chen, Anang A Shelat, R Kiplin Guy, Tanja A Grüber
Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia. Nature communications 14 (1) (2023)
Jennifer L Kamens, Stephanie Nance, Cary Koss, Bei-Si Xu, Anitria Cotton, Jeannie W Lam, Elizabeth A R Garfinkle, Pratima Nallagatla, Amelia M R Smith, Sharnise Mitchell, Jing Ma, Duane Currier, William C Wright, Kanisha Kavdia, Vishwajeeth R Pagala, Wonil Kim, LaShanale M Wallace, Ji-Hoon Cho, Yiping Fan, Aman Seth, Nathaniel Twarog, John Kim Choi, Esther A Obeng, Mark E Hatley, Monika L Metzger, Hiroto Inaba, Sima Jeha, Jeffrey E Rubnitz, Junmin Peng, Taosheng Chen, Anang A Shelat, R Kiplin Guy, Tanja A Grüber
Author Correction: Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia. Nature communications 14 (1) (2023)
Ruishan Wang, Akshita B Bhatt, Benjamin A Minden-Birkenmaier, Olivia K Travis, Srishti Tiwari, Hong Jia, Wojciech Rosikiewicz, Ophelie Martinot, Eleanor Childs, Robin Loesch, Guenole Tossou, Sophie Jamieson, David Finkelstein, Bei-Si Xu, Myriam Labelle
ZBTB18 restricts chromatin accessibility and prevents transcriptional adaptations that drive metastasis. Science advances 9 (1) (2023)
Alex C Hughes, Brittany G Pollard, Bei-Si Xu, Jesse W Gammons, Phillip Chapman, Jay B Bikoff, Lindsay A Schwarz
A Novel Single Vector Intersectional AAV Strategy for Interrogating Cellular Diversity and Brain Function. bioRxiv : the preprint server for biology (2023)
Jennifer L Kamens, Stephanie Nance, Cary Koss, Bei-Si Xu, Anitria Cotton, Jeannie W Lam, Elizabeth A R Garfinkle, Pratima Nallagatla, Amelia M R Smith, Sharnise Mitchell, Jing Ma, Duane Currier, Charlie Wright, Kanisha Kavdia, Vishwajeeth R Pagala, Wonil Kim, LaShanale M Wallace, Ji-Hoon Cho, Yiping Fan, Aman Seth, Nathaniel Twarog, John Kim Choi, Esther A Obeng, Mark E Hatley, Monika L Metzger, Hiroto Inaba, Sima Jeha, Jeffrey E Rubnitz, Junmin Peng, Taosheng Chen, Anang A Shelat, R Kiplin Guy, Tanja A Grüber
Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia. Nature communications 14 (1) (2023)
Jennifer L Kamens, Stephanie Nance, Cary Koss, Bei-Si Xu, Anitria Cotton, Jeannie W Lam, Elizabeth A R Garfinkle, Pratima Nallagatla, Amelia M R Smith, Sharnise Mitchell, Jing Ma, Duane Currier, William C Wright, Kanisha Kavdia, Vishwajeeth R Pagala, Wonil Kim, LaShanale M Wallace, Ji-Hoon Cho, Yiping Fan, Aman Seth, Nathaniel Twarog, John Kim Choi, Esther A Obeng, Mark E Hatley, Monika L Metzger, Hiroto Inaba, Sima Jeha, Jeffrey E Rubnitz, Junmin Peng, Taosheng Chen, Anang A Shelat, R Kiplin Guy, Tanja A Grüber
Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia. Nature communications 14 (1) (2023)
Myron K Evans, Yurika Matsui, Bei-Si Xu, Catherine Willis, Jennifer L Diaz, Luis Milburn, Yiping Fan, Vishwajeeth Pagala, Jamy C Peng
Author Correction: Ybx1 fine-tunes PRC2 activities to control embryonic brain development. Nature communications 14 (1) (2023)
Jennifer L Kamens, Stephanie Nance, Cary Koss, Bei-Si Xu, Anitria Cotton, Jeannie W Lam, Elizabeth A R Garfinkle, Pratima Nallagatla, Amelia M R Smith, Sharnise Mitchell, Jing Ma, Duane Currier, Charlie Wright, Kanisha Kavdia, Vishwajeeth R Pagala, Wonil Kim, LaShanale M Wallace, Ji-Hoon Cho, Yiping Fan, Aman Seth, Nathaniel Twarog, John Kim Choi, Esther A Obeng, Mark E Hatley, Monika L Metzger, Hiroto Inaba, Sima Jeha, Jeffrey E Rubnitz, Junmin Peng, Taosheng Chen, Anang A Shelat, R Kiplin Guy, Tanja A Grüber
Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia. Nature communications 14 (1) (2023)
Alex C Hughes, Brittany G Pollard, Bei-Si Xu, Jesse W Gammons, Phillip Chapman, Jay B Bikoff, Lindsay A Schwarz
A Novel Single Vector Intersectional AAV Strategy for Interrogating Cellular Diversity and Brain Function. bioRxiv : the preprint server for biology (2023)
Yurika Matsui, Mohamed Nadhir Djekidel, Katherine Lindsay, Parimal Samir, Nina Connolly, Gang Wu, Xiaoyang Yang, Yiping Fan, Bei-Si Xu, Jamy C Peng
SNIP1 and PRC2 coordinate cell fates of neural progenitors during brain development. Nature communications 14 (1) (2023)
Madeline B Searcy, Randolph K Larsen, Bradley T Stevens, Yang Zhang, Hongjian Jin, Catherine J Drummond, Casey G Langdon, Katherine E Gadek, Kyna Vuong, Kristin B Reed, Matthew R Garcia, Bei-Si Xu, Darden W Kimbrough, Grace E Adkins, Mohamed Nadhir Djekidel, Shaina N Porter, Patrick A Schreiner, Shondra M Pruett-Miller, Brian J Abraham, Jerold E Rehg, Mark E Hatley
PAX3-FOXO1 dictates myogenic reprogramming and rhabdomyosarcoma identity in endothelial progenitors. Nature communications 14 (1) (2023)
Ruishan Wang, Akshita B Bhatt, Benjamin A Minden-Birkenmaier, Olivia K Travis, Srishti Tiwari, Hong Jia, Wojciech Rosikiewicz, Ophelie Martinot, Eleanor Childs, Robin Loesch, Guenole Tossou, Sophie Jamieson, David Finkelstein, Bei-Si Xu, Myriam Labelle
ZBTB18 restricts chromatin accessibility and prevents transcriptional adaptations that drive metastasis. Science advances 9 (1) (2023)
Shaela Wright, Xujie Zhao, Wojciech Rosikiewicz, Shelby Mryncza, Judith Hyle, Wenjie Qi, Zhenling Liu, Siqi Yi, Yong Cheng, Bei-Si Xu, Chunliang Li
Systematic characterization of the HOXA9 downstream targets in MLL-r leukemia by noncoding CRISPR screens. Nature communications 14 (1) (2023)
Ruishan Wang, Akshita B Bhatt, Benjamin A Minden-Birkenmaier, Olivia K Travis, Srishti Tiwari, Hong Jia, Wojciech Rosikiewicz, Ophelie Martinot, Eleanor Childs, Robin Loesch, Guenole Tossou, Sophie Jamieson, David Finkelstein, Bei-Si Xu, Myriam Labelle
ZBTB18 restricts chromatin accessibility and prevents transcriptional adaptations that drive metastasis. Science advances 9 (1) (2023)
Jeffery M Klco, Melvin Thomas Iii, Wenqing Qi, Michael Walsh, Jing Ma, Tamara Westover, Sherif Abdelhamed, Lauren Ezzell, Chandra Rolle, Emily Xiong, Wojciech Rosikiewicz, Bei-Si Xu, Shondra M Pruett-Miller, Allister Loughran, Laura Janke
Functional Characterization of Cooperating MGA Mutations in RUNX1::RUNX1T1 Acute Myeloid Leukemia. Research square (2023)
Ruishan Wang, Akshita B Bhatt, Benjamin A Minden-Birkenmaier, Olivia K Travis, Srishti Tiwari, Hong Jia, Wojciech Rosikiewicz, Ophelie Martinot, Eleanor Childs, Robin Loesch, Guenole Tossou, Sophie Jamieson, David Finkelstein, Bei-Si Xu, Myriam Labelle
ZBTB18 restricts chromatin accessibility and prevents transcriptional adaptations that drive metastasis. Science advances 9 (1) (2023)
Cheng Tian, Liyuan Li, Qingfei Pan, Bei-Si Xu, Yizhen Li, Li Fan, Anthony Brown, Michelle Morrison, Kaushik Dey, Jun J Yang, Jiyang Yu, Evan S Glazer, Liqin Zhu
Spatiotemporal regulation of cholangiocarcinoma growth and dissemination by peritumoral myofibroblasts in a Vcam1-dependent manner. Oncogene (2023)
Jennifer L Kamens, Stephanie Nance, Cary Koss, Bei-Si Xu, Anitria Cotton, Jeannie W Lam, Elizabeth A R Garfinkle, Pratima Nallagatla, Amelia M R Smith, Sharnise Mitchell, Jing Ma, Duane Currier, William C Wright, Kanisha Kavdia, Vishwajeeth R Pagala, Wonil Kim, LaShanale M Wallace, Ji-Hoon Cho, Yiping Fan, Aman Seth, Nathaniel Twarog, John Kim Choi, Esther A Obeng, Mark E Hatley, Monika L Metzger, Hiroto Inaba, Sima Jeha, Jeffrey E Rubnitz, Junmin Peng, Taosheng Chen, Anang A Shelat, R Kiplin Guy, Tanja A Grüber
Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia. Nature communications 14 (1) (2023)
Jennifer L Kamens, Stephanie Nance, Cary Koss, Bei-Si Xu, Anitria Cotton, Jeannie W Lam, Elizabeth A R Garfinkle, Pratima Nallagatla, Amelia M R Smith, Sharnise Mitchell, Jing Ma, Duane Currier, William C Wright, Kanisha Kavdia, Vishwajeeth R Pagala, Wonil Kim, LaShanale M Wallace, Ji-Hoon Cho, Yiping Fan, Aman Seth, Nathaniel Twarog, John Kim Choi, Esther A Obeng, Mark E Hatley, Monika L Metzger, Hiroto Inaba, Sima Jeha, Jeffrey E Rubnitz, Junmin Peng, Taosheng Chen, Anang A Shelat, R Kiplin Guy, Tanja A Grüber
Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia. Nature communications 14 (1) (2023)
Isha Mondal, Oishika Das, Raymond Sun, Jian Gao, Bo-Hyun You, Aaron A Diaz, Jinan Behnan, Abhishek Dubey, Zhipeng Meng, Emad N Eskandar, Bei-Si Xu, Rongze Olivia Lu, Winson S Ho
PP2Ac Deficiency Enhances Tumor Immunogenicity by Activating STING-Type I Interferon Signaling in Glioblastoma. Cancer research (2023)
Xujie Zhao, Ping Wang, Jonathan D Diedrich, Brandon Smart, Noemi Reyes, Satoshi Yoshimura, Jingliao Zhang, Wentao Yang, Kelly Barnett, Bei-Si Xu, Zhenhua Li, Xin Huang, Jiyang Yu, Kristine R Crews, Allen Eng-Juh Yeoh, Marina Y Konopleva, Chia-Lin Wei, Ching-Hong Pui, Daniel Savic, Jun J Yang
Epigenetic activation of the FLT3 gene by ZNF384 fusion confers a therapeutic susceptibility in acute lymphoblastic leukemia. Nature communications 13 (1) (2022)
Xiaokang Wang, Wojciech Rosikiewicz, Yurii Sedkov, Baisakhi Mondal, Tanner C Martinez, Satish Kallappagoudar, Andrey Tvardovskiy, Richa Bajpai, Bei-Si Xu, Shondra M Pruett-Miller, Robert Schneider, Hans-Martin Herz
The MLL3/4 complexes and MiDAC co-regulate H4K20ac to control a specific gene expression program. Life science alliance 5 (11) (2022)
Flavia A Graca, Mamta Rai, Liam C Hunt, Anna Stephan, Yong-Dong Wang, Brittney Gordon, Ruishan Wang, Giovanni Quarato, Bei-Si Xu, Yiping Fan, Myriam Labelle, Fabio Demontis
The myokine Fibcd1 is an endogenous determinant of myofiber size and mitigates cancer-induced myofiber atrophy. Nature communications 13 (1) (2022)
Shivendra Singh, Ahmed Abu-Zaid, Hongjian Jin, Jie Fang, Qiong Wu, Tingting Wang, Helin Feng, Waise Quarni, Ying Shao, Lily Maxham, Alireza Abdolvahabi, Mi-Kyung Yun, Sivaraja Vaithiyalingam, Haiyan Tan, John Bowling, Victoria Honnell, Brandon M Young, Yian Guo, Richa Bajpai, Shondra M Pruett-Miller, Gerard C Grosveld, Mark E Hatley, Bei-Si Xu, Yiping Fan, Gang Wu, Eleanor Y Chen, Taosheng Chen, Peter W Lewis, Zoran Rankovic, Yimei Li, Andrew Jackson Murphy, John Easton, Junmin Peng, Xiang Chen, Ruoning Wang, Stephen W White, Andrew M Davidoff, Jun J Yang
Targeting KDM4 for treating PAX3-FOXO1-driven alveolar rhabdomyosarcoma. Science translational medicine 14 (653) (2022)
Kirsten M Dickerson, Chunxu Qu, Qingsong Gao, Ilaria Iacobucci, Zhaohui Gu, Hiroki Yoshihara, Emily A Backhaus, Yunchao Chang, Laura J Janke, Bei-Si Xu, Gang Wu, Evangelia K Papachristou, Clive S D'Santos, Kathryn G Roberts, Charles G Mullighan
ZNF384 Fusion Oncoproteins Drive Lineage Aberrancy in Acute Leukemia. Blood cancer discovery 3 (3) (2022)
Alexandra D'Oto, Jie Fang, Hongjian Jin, Bei-Si Xu, Shivendra Singh, Anoushka Mullasseril, Victoria Jones, Ahmed Abu-Zaid, Xinyu von Buttlar, Bailey Cooke, Dongli Hu, Jason Shohet, Andrew Jackson Murphy, Andrew M Davidoff, Jun J Yang
KDM6B promotes activation of the oncogenic CDK4/6-pRB-E2F pathway by maintaining enhancer activity in MYCN-amplified neuroblastoma. Nature communications 12 (1) (2021)
Hao Li, Han Dong, Bei-Si Xu, Qing-Ping Xiong, Cai-Tao Li, Wen-Qing Yang, Jing Li, Zhi-Xuan Huang, Qi-Yu Zeng, En-Duo Wang, Ru-Juan Liu
A dual role of human tRNA methyltransferase hTrmt13 in regulating translation and transcription. The EMBO journal (2021)
Xinying Zong, Xiaolei Hao, Bei-Si Xu, Jeremy Chase Crawford, Shaela Wright, Jun Li, Yang Zhang, Lu Bai, Minghong He, Menglin Jiang, Yiping Fan, Jon Patrick Connelly, Shondra M Pruett-Miller, Hartmut Berns, Laura J Janke, Chunliang Li, Yongqiang Feng
Foxp3 enhancers synergize to maximize regulatory T cell suppressive capacity. The Journal of experimental medicine 218 (8) (2021)
Lindsey E Montefiori, Sonja Bendig, Zhaohui Gu, Xiaolong Chen, Petri Pölönen, Xiaotu Ma, Alex Murison, Andy Zeng, Laura Garcia-Prat, Kirsten Dickerson, Ilaria Iacobucci, Sherif Abdelhamed, Ryan Hiltenbrand, Paul E Mead, Cyrus M Mehr, Bei-Si Xu, Zhongshan Cheng, Ti-Cheng Chang, Tamara Westover, Jing Ma, Anna Stengel, Shunsuke Kimura, Chunxu Qu, Marcus B Valentine, Marissa Rashkovan, Selina Luger, Mark R Litzow, Jacob M Rowe, Monique L Den Boer, Victoria Wang, Jun Yin, Steven M Kornblau, Stephen P Hunger, Mignon L Loh, Ching-Hong Pui, Wenjian Yang, Kristine R Crews, Kathryn G Roberts, Jun J Yang, Mary V Relling, William E Evans, Wendy Stock, Elisabeth M Paietta, Adolfo A Ferrando, Jinghui Zhang, Wolfgang Kern, Torsten Haferlach, Gang Wu, John E Dick, Jeffery M Klco, Claudia Haferlach, Charles G Mullighan
Enhancer Hijacking Drives Oncogenic BCL11B Expression in Lineage-Ambiguous Stem Cell Leukemia. Cancer discovery 11 (11) (2021)
Jing Li, Yan-Nan Wang, Bei-Si Xu, Ya-Ping Liu, Mi Zhou, Tao Long, Hao Li, Han Dong, Yan Nie, Peng R Chen, En-Duo Wang, Ru-Juan Liu
Intellectual disability-associated gene ftsj1 is responsible for 2'-O-methylation of specific tRNAs. EMBO reports 21 (8) (2020)
Hao Zhang, Yang Zhang, Xinyue Zhou, Shaela Wright, Judith Hyle, Lianzhong Zhao, Jie An, Xujie Zhao, Ying Shao, Bei-Si Xu, Hyeong-Min Lee, Taosheng Chen, Yang Zhou, Xiang Chen, Rui Lu, Chunliang Li
Functional interrogation of HOXA9 regulome in MLLr leukemia via reporter-based CRISPR/Cas9 screen. eLife 9 (2020)
Juwina Wijaya, BaoHan T Vo, JingJing Liu, Bei-Si Xu, Gang Wu, Yao Wang, Junmin Peng, Jin Zhang, Laura J Janke, Brent A Orr, Jiyang Yu, Martine F Roussel, John D Schuetz
An ABC Transporter Drives Medulloblastoma Pathogenesis by Regulating Sonic Hedgehog Signaling. Cancer research 80 (7) (2020)
Myron K Evans, Yurika Matsui, Bei-Si Xu, Catherine Willis, Jennifer L Diaz, Luis Milburn, Yiping Fan, Vishwajeeth Pagala, Jamy C Peng
Ybx1 fine-tunes PRC2 activities to control embryonic brain development. Nature communications 11 (1) (2020)
Maged Zeineldin, Sara Federico, Xiang Chen, Yiping Fan, Bei-Si Xu, Elizabeth Stewart, Xin Zhou, Jongrye Jeon, Lyra Griffiths, Rosa Nguyen, Jackie Norrie, John Easton, Heather L Mulder, Donald Yergeau, Yanling Liu, Jianrong Wu, Collin Van Ryn, Arlene Naranjo, Michael D Hogarty, Marcin Mikołaj Kamiński, Marc Valentine, Shondra M Pruett-Miller, Alberto Pappo, Jinghui Zhang, Michael R Clay, Armita Bahrami, Peter Vogel, Seungjae Lee, Anang A Shelat, Jay F Sarthy, Michael P Meers, Rani E George, Elaine R Mardis, Richard K Wilson, Steven Henikoff, James R Downing, Michael A Dyer
MYCN amplification and ATRX mutations are incompatible in neuroblastoma. Nature communications 11 (1) (2020)
Xiaoyang Yang, Bei-Si Xu, Brett Mulvey, Myron Evans, Samuel Jordan, Yong-Dong Wang, Vishwajeeth Pagala, Junmin Peng, Yiping Fan, Arishna Patel, Jamy C Peng
Differentiation of human pluripotent stem cells into neurons or cortical organoids requires transcriptional co-regulation by UTX and 53BP1. Nature neuroscience 22 (3) (2019)
Liqing Tian, Ying Shao, Stephanie Nance, Jinjun Dang, Bei-Si Xu, Xiaotu Ma, Yongjin Li, Bensheng Ju, Li Dong, Scott Newman, Xin Zhou, Patrick Schreiner, Elizabeth Tseng, Ting Hon, Meredith Ashby, Chunliang Li, John Easton, Tanja A Gruber, Jinghui Zhang
Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia. Nature communications 10 (1) (2019)
BaoHan T Vo, Jin Ah Kwon, Chunliang Li, David Finkelstein, Bei-Si Xu, Brent A Orr, Charles J Sherr, Martine F Roussel
Mouse medulloblastoma driven by CRISPR activation of cellular Myc. Scientific reports 8 (1) (2018)
Jinghui Zhang, Kelly McCastlain, Hiroki Yoshihara, Bei-Si Xu, Yunchao Chang, Michelle L Churchman, Gang Wu, Yongjin Li, Lei Wei, Ilaria Iacobucci, Yu Liu, Chunxu Qu, Ji Wen, Michael Edmonson, Debbie Payne-Turner, Kerstin B Kaufmann, Shin-Ichiro Takayanagi, Erno Wienholds, Esmé Waanders, Panagiotis Ntziachristos, Sofia Bakogianni, Jingjing Wang, Iannis Aifantis, Kathryn G Roberts, Jing Ma, Guangchun Song, John Easton, Heather L Mulder, Xiang Chen, Scott Newman, Xiaotu Ma, Michael C Rusch, Pankaj Gupta, Kristy Boggs, Bhavin Vadodaria, James Dalton, Yanling Liu, Marcus L Valentine, Li Ding, Charles Lu, Robert S Fulton, Lucinda Fulton, Yashodhan Tabib, Kerri Ochoa, Meenakshi Devidas, Deqing Pei, Cheng Cheng, Jun J Yang, William E Evans, Mary V Relling, Ching-Hon Pui, Sima Jeha, Richard C Harvey, I-Ming L Chen, Cheryl L Willman, Guido Marcucci, Clara D Bloomfield, Jessica Kohlschmidt, Krzysztof Mrózek, Elisabeth Paietta, Martin S Tallman, Wendy Stock, Matthew C Foster, Janis Racevskis, Jacob M Rowe, Selina Luger, Steven M Kornblau, Sheila A Shurtleff, Susana C Raimondi, Elaine R Mardis, Richard K Wilson, John E Dick, Stephen P Hunger, Mignon L Loh, James R Downing, Charles G Mullighan, null null
Deregulation of DUX4 and ERG in acute lymphoblastic leukemia. Nature genetics 48 (12) (2016)

Bei-Si Xu.css-eqlu8i{font-size:small;padding-left:4px;} (Beisi Xu)

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Bei-Si Xu (Beisi Xu)