Simone Sidoli

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 56

Top Venues

bioRxiv : the preprint server for biology

Nature communications

Science signaling

Science advances

Albert Einstein College of Medicine

University of Southern Denmark (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Albert Einstein College of Medicine Feb 25 2019

United States

Assistant professor :: Biochemistry

Education History

University of Southern Denmark Oct 01 2010 - Mar 31 2014

Denmark

PHD :: Biochemistry and Molecular Biology

University of Parma Sep 01 2004 - Feb 12 2010

Italy

MSC :: Analytical Chemistry

Publications

Amber K Weiner, Alexander B Radaoui, Matthew Tsang, Daniel Martinez, Simone Sidoli, Karina L Conkrite, Alberto Delaidelli, Apexa Modi, Jo Lynne Rokita, Khushbu Patel, Maria V Lane, Bo Zhang, Chuwei Zhong, Brian M Ennis, Daniel P Miller, Miguel A Brown, Komal S Rathi, Pichai Raman, Jennifer Pogoriler, Tricia Bhatti, Bruce Pawel, Tina Glisovic-Aplenc, Beverly Teicher, Stephen W Erickson, Eric Jay Earley, Kristopher R Bosse, Poul H Sorensen, Kateryna Krytska, Yael P Mosse, Karin E Havenith, Francesca Zammarchi, Patrick H van Berkel, Malcolm A Smith, Benjamin A Garcia, John M Maris, Sharon J Diskin
A proteogenomic surfaceome study identifies DLK1 as an immunotherapeutic target in neuroblastoma. bioRxiv : the preprint server for biology (2024)
Amber K Weiner, Alexander B Radaoui, Matthew Tsang, Daniel Martinez, Simone Sidoli, Karina L Conkrite, Alberto Delaidelli, Apexa Modi, Jo Lynne Rokita, Khushbu Patel, Maria V Lane, Bo Zhang, Chuwei Zhong, Brian M Ennis, Daniel P Miller, Miguel A Brown, Komal S Rathi, Pichai Raman, Jennifer Pogoriler, Tricia Bhatti, Bruce Pawel, Tina Glisovic-Aplenc, Beverly Teicher, Stephen W Erickson, Eric Jay Earley, Kristopher R Bosse, Poul H Sorensen, Kateryna Krytska, Yael P Mosse, Karin E Havenith, Francesca Zammarchi, Patrick H van Berkel, Malcolm A Smith, Benjamin A Garcia, John M Maris, Sharon J Diskin
A proteogenomic surfaceome study identifies DLK1 as an immunotherapeutic target in neuroblastoma. bioRxiv : the preprint server for biology (2024)
Philipp Mews, Lucas Sosnick, Ashik Gurung, Simone Sidoli, Eric J Nestler
Decoding cocaine-induced proteomic adaptations in the mouse nucleus accumbens. Science signaling 17 (832) (2024)
Sandhya Malla, Kanchan Kumari, Carlos A García-Prieto, Jonatan Caroli, Anna Nordin, Trinh T T Phan, Devi Prasad Bhattarai, Carlos Martinez-Gamero, Eshagh Dorafshan, Stephanie Stransky, Damiana Álvarez-Errico, Paulina Avovome Saiki, Weiyi Lai, Cong Lyu, Ludvig Lizana, Jonathan D Gilthorpe, Hai-Lin Wang, Simone Sidoli, André Mateus, Dung-Fang Lee, Claudio Cantú, Manel Esteller, Andrea Mattevi, Angel-Carlos Roman, Francesca Aguilo
The scaffolding function of LSD1 controls DNA methylation in mouse ESCs. Nature communications 15 (1) (2024)
Ronald Cutler, Laura Corveleyn, Claudia Ctortecka, Joshua Cantlon, Sebastian Alvaro Jacome Vaca, Dieter Deforce, Jan Vijg, Maarten Dhaenens, Malvina Papanastasiou, Steven A Carr, Simone Sidoli
Mass Spectrometry-based Profiling of Single-cell Histone Post-translational Modifications to Dissect Chromatin Heterogeneity. bioRxiv : the preprint server for biology (2024)
Philipp Mews, Lucas Sosnick, Ashik Gurung, Simone Sidoli, Eric J Nestler
Decoding cocaine-induced proteomic adaptations in the mouse nucleus accumbens. Science signaling 17 (832) (2024)
Melody DiBona, Yanyang Chen, Albert S Agustinus, Alice Mazzagatti, Mercedes A Duran, Matthew Deyell, Daniel Bronder, James H Hickling, Christy Hong, Lorenzo Scipioni, Giulia Tedeschi, Sara Martin, Jun Li, Aušrinė Ruzgaitė, Nadeem Riaz, Parin Shah, Edridge K D'Souza, D Zack Brodtman, Simone Sidoli, Bill Diplas, Manisha Jalan, Nancy Y Lee, Alban Ordureau, Benjamin Izar, Ashley M Laughney, Simon N Powell, Enrico Gratton, Stefano Santaguida, John Maciejowski, Peter Ly, Thomas M Jeitner, Samuel F Bakhoum
Micronuclear collapse from oxidative damage. Science (New York, N.Y.) 385 (6712) (2024)
Philipp Mews, Lucas Sosnick, Ashik Gurung, Simone Sidoli, Eric J Nestler
Decoding cocaine-induced proteomic adaptations in the mouse nucleus accumbens. Science signaling 17 (832) (2024)
James R Occean, Na Yang, Yan Sun, Marshall S Dawkins, Rachel Munk, Cedric Belair, Showkat A Dar, Carlos Anerillas, Lin Wang, Changyou Shi, Christopher A Dunn, Michel Bernier, Nathan L Price, Julie S Kim, Chang-Yi Cui, Jinshui Fan, Moitrayee Bhattacharyya, Supriyo De, Manolis Maragkakis, Rafael de Cabo, Simone Sidoli, Alejandro Ocampo
Gene body DNA hydroxymethylation restricts the magnitude of transcriptional changes during aging. Nature communications 15 (1) (2024)
Mai-Uyen Nguyen, Jahangir Iqbal, Sarah Potgieter, Winston Huang, Julie Pfeffer, Sean Woo, Caifeng Zhao, Matthew A Lawlor, Richard Yang, Rahma Rizly, Angela Halstead, Sharon Y R Dent, José B Sáenz, Haiyan Zheng, Zuo-Fei Yuan, Simone Sidoli, Christopher E Ellison, Michael P Verzi
KAT2A and KAT2B prevent double-stranded RNA accumulation and interferon signaling to maintain intestinal stem cell renewal. Science advances 10 (32) (2024)
Joseph D DeAngelo, Maxim I Maron, Jacob S Roth, Aliza M Silverstein, Varun Gupta, Stephanie Stransky, Joel Basken, Joey Azofeifa, Simone Sidoli, Matthew J Gamble, David Shechter
Productive mRNA Chromatin Escape is Promoted by PRMT5 Methylation of SNRPB. bioRxiv : the preprint server for biology (2024)
Johanna Heid, Ronald Cutler, Shixiang Sun, Moonsook Lee, Alexander Y Maslov, Xiao Dong, Simone Sidoli, Jan Vijg
Negative selection allows human primary fibroblasts to tolerate high somatic mutation loads induced by N-ethyl-N-nitrosourea. bioRxiv : the preprint server for biology (2024)
James R Occean, Na Yang, Yan Sun, Marshall S Dawkins, Rachel Munk, Cedric Belair, Showkat A Dar, Carlos Anerillas, Lin Wang, Changyou Shi, Christopher A Dunn, Michel Bernier, Nathan L Price, Julie S Kim, Chang-Yi Cui, Jinshui Fan, Moitrayee Bhattacharyya, Supriyo De, Manolis Maragkakis, Rafael de Cabo, Simone Sidoli, Alejandro Ocampo
Gene body DNA hydroxymethylation restricts the magnitude of transcriptional changes during aging. Nature communications 15 (1) (2024)
James R Occean, Na Yang, Yan Sun, Marshall S Dawkins, Rachel Munk, Cedric Belair, Showkat A Dar, Carlos Anerillas, Lin Wang, Changyou Shi, Christopher A Dunn, Michel Bernier, Nathan L Price, Julie S Kim, Chang-Yi Cui, Jinshui Fan, Moitrayee Bhattacharyya, Supriyo De, Manolis Maragkakis, Rafael de Cabo, Simone Sidoli, Alejandro Ocampo
Gene body DNA hydroxymethylation restricts the magnitude of transcriptional changes during aging. Nature communications 15 (1) (2024)
Philipp Mews, Lucas Sosnick, Ashik Gurung, Simone Sidoli, Eric J Nestler
Decoding cocaine-induced proteomic adaptations in the mouse nucleus accumbens. Science signaling 17 (832) (2024)
Johanna Heid, Ronald Cutler, Shixiang Sun, Moonsook Lee, Alexander Y Maslov, Xiao Dong, Simone Sidoli, Jan Vijg
Evidence for negative selection in human primary fibroblasts to tolerate high somatic mutation loads upon treatment with multiple low doses of N-ethyl-N-nitrosourea. bioRxiv : the preprint server for biology (2024)
Joseph D DeAngelo, Maxim I Maron, Jacob S Roth, Aliza M Silverstein, Varun Gupta, Stephanie Stransky, Joel Basken, Joey Azofeifa, Simone Sidoli, Matthew J Gamble, David Shechter
Productive mRNA Chromatin Escape is Promoted by PRMT5 Methylation of SNRPB. bioRxiv : the preprint server for biology (2024)
Mai-Uyen Nguyen, Jahangir Iqbal, Sarah Potgieter, Winston Huang, Julie Pfeffer, Sean Woo, Caifeng Zhao, Matthew A Lawlor, Richard Yang, Rahma Rizly, Angela Halstead, Sharon Y R Dent, José B Sáenz, Haiyan Zheng, Zuo-Fei Yuan, Simone Sidoli, Christopher E Ellison, Michael P Verzi
KAT2A and KAT2B prevent double-stranded RNA accumulation and interferon signaling to maintain intestinal stem cell renewal. Science advances 10 (32) (2024)
Keita Nakane, Christophe Morisseau, Presley D Dowker-Key, Gabrielle Benitez, Jennifer T Aguilan, Emiko Nagai, Simone Sidoli, Bruce D Hammock, Ahmed Bettaieb, Kosaku Shinoda, Seiya Kitamura
In vivo -Active Soluble Epoxide Hydrolase-targeting PROTACs with Improved Potency and Stability. bioRxiv : the preprint server for biology (2024)
Mai-Uyen Nguyen, Jahangir Iqbal, Sarah Potgieter, Winston Huang, Julie Pfeffer, Sean Woo, Caifeng Zhao, Matthew A Lawlor, Richard Yang, Rahma Rizly, Angela Halstead, Sharon Y R Dent, José B Sáenz, Haiyan Zheng, Zuo-Fei Yuan, Simone Sidoli, Christopher E Ellison, Michael P Verzi
KAT2A and KAT2B prevent double-stranded RNA accumulation and interferon signaling to maintain intestinal stem cell renewal. Science advances 10 (32) (2024)
James R Occean, Na Yang, Yan Sun, Marshall S Dawkins, Rachel Munk, Cedric Belair, Showkat A Dar, Carlos Anerillas, Lin Wang, Changyou Shi, Christopher A Dunn, Michel Bernier, Nathan L Price, Julie S Kim, Chang-Yi Cui, Jinshui Fan, Moitrayee Bhattacharyya, Supriyo De, Manolis Maragkakis, Rafael de Cabo, Simone Sidoli, Alejandro Ocampo
Gene body DNA hydroxymethylation restricts the magnitude of transcriptional changes during aging. Nature communications 15 (1) (2024)
Renhe Luo, Jielin Yan, Jin Woo Oh, Wang Xi, Dustin Shigaki, Wilfred Wong, Hyein S Cho, Dylan Murphy, Ronald Cutler, Bess P Rosen, Julian Pulecio, Dapeng Yang, Rachel A Glenn, Tingxu Chen, Qing V Li, Thomas Vierbuchen, Simone Sidoli, Effie Apostolou, Danwei Huangfu, Michael A Beer
Dynamic network-guided CRISPRi screen identifies CTCF-loop-constrained nonlinear enhancer gene regulatory activity during cell state transitions. Nature genetics (2023)
Eva Mittler, Alexandra Serris, Emma S Esterman, Catalina Florez, Laura C Polanco, Cecilia M O'Brien, Megan M Slough, Janne Tynell, Remigius Gröning, Yan Sun, Dafna M Abelson, Anna Z Wec, Denise Haslwanter, Markus Keller, Chunyan Ye, Russel R Bakken, Rohit K Jangra, John M Dye, Clas Ahlm, C Garrett Rappazzo, Rainer Günter Ulrich, Larry Zeitlin, James C Geoghegan, Steven B Bradfute, Simone Sidoli, Mattias N E Forsell, Tomas M Strandin, Felix A Rey, Andrew S Herbert, Laura M Walker, Kartik Chandran, Guardado-Calvo Pablo
Structural and mechanistic basis of neutralization by a pan-hantavirus protective antibody. Science translational medicine 15 (700) (2023)
Edwin J Yoo, Julie S Kim, Stephanie Stransky, Simon Spivack, Simone Sidoli
Advances in proteomics methods for the analysis of exhaled breath condensate. Mass spectrometry reviews 43 (4) (2023)
Dejauwne Young, Chandan Guha, Simone Sidoli
The role of histone H3 lysine demethylases in glioblastoma. Cancer metastasis reviews (2023)
Edwin J Yoo, Julie S Kim, Stephanie Stransky, Simon Spivack, Simone Sidoli
Advances in proteomics methods for the analysis of exhaled breath condensate. Mass spectrometry reviews (2023)
Albert S Agustinus, Duaa H Al-Rawi, Bhargavi Dameracharla, Ramya Raviram, Bailey S C L Jones, Stephanie Stransky, Lorenzo Scipioni, Jens Luebeck, Melody DiBona, Danguole Norkunaite, Robert M Myers, Mercedes Duran, Seongmin Choi, Jorge S Reis-Filho, Shira Yomtoubian, Andrew McPherson, Eléonore Toufektchan, Kristina Keuper, Paul S Mischel, Vivek Mittal, Sohrab P Shah, John Maciejowski, Zuzana Storchová, Enrico Gratton, Peter Ly, Dan Landau, Mathieu F Bakhoum, Richard P Koche, Simone Sidoli, Vineet Bafna, Yael David, Samuel F Bakhoum
Epigenetic dysregulation from chromosomal transit in micronuclei. Nature (2023)
Edwin J Yoo, Julie S Kim, Stephanie Stransky, Simon Spivack, Simone Sidoli
Advances in proteomics methods for the analysis of exhaled breath condensate. Mass spectrometry reviews 43 (4) (2023)
Phillip M Galbo, Anne Tranberg Madsen, Yang Liu, Mou Peng, Yao Wei, Michael J Ciesielski, Robert A Fenstermaker, Sarah Graff, Cristina Montagna, Jeffrey E Segall, Simone Sidoli, Xingxing Zang, Deyou Zheng
Functional Contribution and Clinical Implication of Cancer-Associated Fibroblasts in Glioblastoma. Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Amber K Weiner, Alexander B Radaoui, Matthew Tsang, Daniel Martinez, Simone Sidoli, Karina L Conkrite, Alberto Delaidelli, Apexa Modi, Jo Lynne Rokita, Khushbu Patel, Maria V Lane, Bo Zhang, Chuwei Zhong, Brian M Ennis, Daniel P Miller, Miguel A Brown, Komal S Rathi, Pichai Raman, Jennifer Pogoriler, Tricia Bhatti, Bruce Pawel, Tina Glisovic-Aplenc, Beverly Teicher, Stephen W Erickson, Eric Jay Earley, Kristopher R Bosse, Poul H Sorensen, Kateryna Krytska, Yael P Mosse, Karin E Havenith, Francesca Zammarchi, Patrick H van Berkel, Malcolm A Smith, Benjamin A Garcia, John M Maris, Sharon J Diskin
A proteogenomic surfaceome study identifies DLK1 as an immunotherapeutic target in neuroblastoma. bioRxiv : the preprint server for biology (2023)
Amber K Weiner, Alexander B Radaoui, Matthew Tsang, Daniel Martinez, Simone Sidoli, Karina L Conkrite, Alberto Delaidelli, Apexa Modi, Jo Lynne Rokita, Khushbu Patel, Maria V Lane, Bo Zhang, Chuwei Zhong, Brian M Ennis, Daniel P Miller, Miguel A Brown, Komal S Rathi, Pichai Raman, Jennifer Pogoriler, Tricia Bhatti, Bruce Pawel, Tina Glisovic-Aplenc, Beverly Teicher, Stephen W Erickson, Eric Jay Earley, Kristopher R Bosse, Poul H Sorensen, Kateryna Krytska, Yael P Mosse, Karin E Havenith, Francesca Zammarchi, Patrick H van Berkel, Malcolm A Smith, Benjamin A Garcia, John M Maris, Sharon J Diskin
A proteogenomic surfaceome study identifies DLK1 as an immunotherapeutic target in neuroblastoma. bioRxiv : the preprint server for biology (2023)
Daniele Chaves-Moreira, Marilyn A Mitchell, Cristina Arruza, Priyanka Rawat, Simone Sidoli, Robbin Nameki, Jessica Reddy, Rosario I Corona, Lena K Afeyan, Isaac A Klein, Sisi Ma, Boris Winterhoff, Gottfried E Konecny, Benjamin A Garcia, Donita C Brady, Kate Lawrenson, Patrice J Morin, Ronny Drapkin
The transcription factor PAX8 promotes angiogenesis in ovarian cancer through interaction with SOX17. Science signaling 15 (728) (2022)
Gregory J Krause, Antonio Diaz, Maryam Jafari, Rabia R Khawaja, Esperanza Agullo-Pascual, Olaya Santiago-Fernández, Alicia L Richards, Kuei-Ho Chen, Phillip Dmitriev, Yan Sun, Stephanie K See, Kotb Abdelmohsen, Krystyna Mazan-Mamczarz, Nevan J Krogan, Myriam Gorospe, Danielle L Swaney, Simone Sidoli, Jose Javier Bravo-Cordero, Martin Edward Kampmann, Ana Maria Cuervo
Reduced endosomal microautophagy activity in aging associates with enhanced exocyst-mediated protein secretion. Aging cell 21 (10) (2022)
John M Barbaro, Simone Sidoli, Ana Maria Cuervo, Joan W Berman
Methamphetamine Dysregulates Macrophage Functions and Autophagy to Mediate HIV Neuropathogenesis. Biomedicines 10 (6) (2022)
Yekaterina Perez, Peder J Lund, Matteo Trovato, Simone Sidoli, Zuo-Fei Yuan, Kyung-Min Noh, Benjamin A Garcia
Multi-omic profiling of histone variant H3.3 lysine 27 methylation reveals a distinct role from canonical H3 in stem cell differentiation. Molecular omics 18 (4) (2022)
Maxim I Maron, Alyssa D Casill, Varun Gupta, Jacob S Roth, Simone Sidoli, Charles C Query, Matthew J Gamble, David Shechter
Type I and II PRMTs inversely regulate post-transcriptional intron detention through Sm and CHTOP methylation. eLife 11 (2022)
Liliana Garcia-Martinez, Andrew M Adams, Ho Lam Chan, Yuichiro Nakata, Natalia Weich, Stephanie Stransky, Zhao Zhang, Mohamed Alshalalfa, Leonor Sarria, Brandon A Mahal, Susan B Kesmodel, Toni Celià-Terrassa, Zhijie Liu, Saverio Minucci, Daniel Bilbao, Simone Sidoli, Ramiro E Verdun, Lluis Morey
Endocrine resistance and breast cancer plasticity are controlled by CoREST. Nature structural & molecular biology 29 (11) (2022)
Mariel Mendoza, Gabor Egervari, Simone Sidoli, Greg Donahue, Desi C Alexander, Alejandro Ocampo, Benjamin A Garcia, Shelley L Berger
Enzymatic transfer of acetate on histones from lysine reservoir sites to lysine activating sites. Science advances 8 (3) (2022)
Jim P Fouracre, Jia He, Victoria J Chen, Simone Sidoli, R Scott Poethig
VAL genes regulate vegetative phase change via miR156-dependent and independent mechanisms. PLoS genetics 17 (6) (2021)
Peder J Lund, Mariana Lopes, Simone Sidoli, Mariel Coradin, Francisca Nathália de Luna Vitorino, Julia Pinheiro Chagas da Cunha, Benjamin A Garcia
FGF-2 induces a failure of cell cycle progression in cells harboring amplified K-Ras, revealing new insights into oncogene-induced senescence. Molecular omics 17 (5) (2021)
Hope Kronman, Angélica Torres-Berrío, Simone Sidoli, Orna Issler, Arthur Godino, Aarthi Ramakrishnan, Philipp Mews, Casey K Lardner, Eric M Parise, Deena M Walker, Yentl Y van der Zee, Caleb J Browne, Brittany F Boyce, Rachael Neve, Benjamin A Garcia, Li Shen, Catherine Jensen Peña, Eric J Nestler
Long-term behavioral and cell-type-specific molecular effects of early life stress are mediated by H3K79me2 dynamics in medium spiny neurons. Nature neuroscience 24 (5) (2021)
Gary Dixon, Heng Pan, Dapeng Yang, Bess P Rosen, Therande Jashari, Nipun Verma, Julian Pulecio, Inbal Caspi, Kihyun Lee, Stephanie Stransky, Abigail Glezer, Chang Liu, Marco Rivas, Ritu Kumar, Yahui Lan, Ingrid Torregroza, Chuan He, Simone Sidoli, Todd Evans, Olivier Elemento, Danwei Huangfu
QSER1 protects DNA methylation valleys from de novo methylation. Science (New York, N.Y.) 372 (6538) (2021)
Joshua Mayoral, Tadakimi Tomita, Vincent Tu, Jennifer T Aguilan, Simone Sidoli, Louis M Weiss
Toxoplasma gondii PPM3C, a secreted protein phosphatase, affects parasitophorous vacuole effector export. PLoS pathogens 16 (12) (2020)
Maja Gehre, Daria Bunina, Simone Sidoli, Marlena J Lübke, Nichole Diaz, Matteo Trovato, Benjamin A Garcia, Judith Barbara Zaugg, Kyung Min Noh
Lysine 4 of histone H3.3 is required for embryonic stem cell differentiation, histone enrichment at regulatory regions and transcription accuracy. Nature genetics 52 (3) (2020)
Wenqing Ren, Nicole Medeiros, Robert Warneford-Thomson, Phillip Wulfridge, Qingqing Yan, Joyce Bian, Simone Sidoli, Benjamin A Garcia, Emmanuel Skordalakes, Eric Joyce, Roberto Bonasio, Kavitha Sarma
Disruption of ATRX-RNA interactions uncovers roles in ATRX localization and PRC2 function. Nature communications 11 (1) (2020)
Stine Emilie Weis-Banke, Mads Lerdrup, Daniela Kleine-Kohlbrecher, Faizaan Mohammad, Simone Sidoli, Ole Nørregaard Jensen, Toshihiko Yanase, Tomoko Nakamura, Akira Iwase, Anthe Stylianou, Nadeem R Abu-Rustum, Carol Aghajanian, Robert Soslow, Arnaud Da Cruz Paula, Richard P Koche, Britta Weigelt, Jesper Christensen, Kristian Helin, Paul A C Cloos
Mutant FOXL2C134W Hijacks SMAD4 and SMAD2/3 to Drive Adult Granulosa Cell Tumors. Cancer research 80 (17) (2020)
Raffaella Nativio, Yemin Lan, Greg Donahue, Simone Sidoli, Amit Berson, Ananth R Srinivasan, Oksana Shcherbakova, Alexandre Amlie-Wolf, Ji Nie, Xiaolong Cui, Chuan He, Li-San Wang, Benjamin A Garcia, John Q Trojanowski, Nancy M Bonini, Shelley L Berger
An integrated multi-omics approach identifies epigenetic alterations associated with Alzheimer's disease. Nature genetics 52 (10) (2020)
Simone Sidoli, Yekaterina Perez, Mariana Lopes, Zuo-Fei Yuan, Hee Jong Kim, Katarzyna Kulej, Kevin A Janssen, Laura M Agosto, Julia Pinheiro Chagas da Cunha, Andrew J Andrews, Benjamin A Garcia
One minute analysis of 200 histone posttranslational modifications by direct injection mass spectrometry. Genome research 29 (6) (2019)
Brianna J Klein, Suk Min Jang, Catherine Lachance, Wenyi Mi, Jie Lyu, Shun Sakuraba, Krzysztof Krajewski, Wesley W Wang, Simone Sidoli, Jiuyang Liu, Yi Zhang, Xiaolu Wang, Becka M Warfield, Andrew J Kueh, Anne K Voss, Tim Thomas, Benjamin A Garcia, Wenshe Ray Liu, Brian D Strahl, Hidetoshi Kono, Weibo Xie, Xiaobing Shi, Jacques Côté, Tatiana G Kutateladze
Histone H3K23-specific acetylation by MORF is coupled to H3K14 acylation. Nature communications 10 (1) (2019)
Dario Nicetto, Greg Donahue, Tanya Jain, Tao Peng, Simone Sidoli, Xiaomei Hu, Thomas Montavon, Justin S Becker, Jessica M Grindheim, Kimberly Blahnik, Benjamin A Garcia, Kai Tan, Roberto Bonasio, Thomas Jenuwein, Kenneth S Zaret
H3K9me3-heterochromatin loss at protein-coding genes enables developmental lineage specification. Science (New York, N.Y.) 363 (6424) (2019)
Anumita Saha-Shah, Melody Esmaeili, Simone Sidoli, Hyojeong Hwang, Jing Yang, Peter S Klein, Benjamin A Garcia
Single Cell Proteomics by Data-Independent Acquisition To Study Embryonic Asymmetry in Xenopus laevis. Analytical chemistry 91 (14) (2019)
Simone Sidoli
Middle-Down MS is Ready to Answer Complex Questions in Chromatin Biology. Proteomics 18 (13) (2018)
Zuo-Fei Yuan, Simone Sidoli, Dylan M Marchione, Johayra Simithy, Kevin A Janssen, Mary R Szurgot, Benjamin A Garcia
EpiProfile 2.0: A Computational Platform for Processing Epi-Proteomics Mass Spectrometry Data. Journal of proteome research 17 (7) (2018)
Jeremy Kreher, Teruaki Takasaki, Chad Steven Cockrum, Simone Sidoli, Benjamin A Garcia, Ole N Jensen, Susan Strome
Distinct Roles of Two Histone Methyltransferases in Transmitting H3K36me3-Based Epigenetic Memory Across Generations in Caenorhabditis elegans. Genetics 210 (3) (2018)
Jeremy D Grevet, Xianjiang Lan, Nicole Hamagami, Christopher R Edwards, Laavanya Sankaranarayanan, Xinjun Ji, Saurabh K Bhardwaj, Carolyne J Face, David F Posocco, Osheiza Abdulmalik, Cheryl A Keller, Belinda M Giardine, Simone Sidoli, Ben A Garcia, Stella T Chou, Stephen A Liebhaber, Ross C Hardison, Junwei Shi, Gerd A Blobel
Domain-focused CRISPR screen identifies HRI as a fetal hemoglobin regulator in human erythroid cells. Science (New York, N.Y.) 361 (6399) (2018)
Qi Guo, Simone Sidoli, Benjamin A Garcia, Xiaolu Zhao
Assessment of Quantification Precision of Histone Post-Translational Modifications by Using an Ion Trap and down To 50 000 Cells as Starting Material. Journal of proteome research 17 (1) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Simone Sidoli