Eugene N Muratov (Eugene Muratov)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 51

Top Topics

Molecular Docking

Trypanosoma Cruzi

Top Venues

Journal of chemical information and modeling

Journal of the American Chemical Society

Journal of medicinal chemistry

Bioinformatics (Oxford, England)

This page only lists publications with an associated author ORCID identifier.

Publications

Jarrett M Pelton, Joshua E Hochuli, Patric W Sadecki, Takayuki Katoh, Hiroaki Suga, Leslie M Hicks, Eugene N Muratov, Alexander Trospsha, Albert A Bowers
Cheminformatics-Guided Cell-Free Exploration of Peptide Natural Products. Journal of the American Chemical Society 146 (12) (2024)
Jarrett M Pelton, Joshua E Hochuli, Patric W Sadecki, Takayuki Katoh, Hiroaki Suga, Leslie M Hicks, Eugene N Muratov, Alexander Trospsha, Albert A Bowers
Cheminformatics-Guided Cell-Free Exploration of Peptide Natural Products. Journal of the American Chemical Society 146 (12) (2024)
Holli-Joi Martin, Mohammad Anwar Hossain, James Wellnitz, Enes Kelestemur, Joshua E Hochuli, Sumera Parveen, Cheryl Arrowsmith, Timothy M Willson, Eugene N Muratov, Alexander Tropsha
Heli-SMACC: Helicase-targeting SMAll Molecule Compound Collection. bioRxiv : the preprint server for biology (2024)
Jon-Michael T Beasley, Daniel R Korn, Nyssa N Tucker, Erick T M Alves, Eugene N Muratov, Chris Bizon, Alexander Trospsha
ExEmPLAR (Extracting, Exploring, and Embedding Pathways Leading to Actionable Research): a user-friendly interface for knowledge graph mining. Bioinformatics (Oxford, England) 40 (1) (2024)
Marielle Rath, James Wellnitz, Holli-Joi Sullivan, Cleber Melo-Filho, Joshua E Hochuli, Guilherme Martins Silva, Jon-Michael Beasley, Maxfield Travis, Zoe L Sessions, Konstantin I Popov, Alexey V Zakharov, Artem Cherkasov, Vinicius Alves, Eugene N Muratov, Alexander Trospsha
Pharmacokinetics Profiler (PhaKinPro): Model Development, Validation, and Implementation as a Web Tool for Triaging Compounds with Undesired Pharmacokinetics Profiles. Journal of medicinal chemistry (2024)
Jon-Michael T Beasley, Daniel R Korn, Nyssa N Tucker, Erick T M Alves, Eugene N Muratov, Chris Bizon, Alexander Trospsha
ExEmPLAR (Extracting, Exploring, and Embedding Pathways Leading to Actionable Research): a user-friendly interface for knowledge graph mining. Bioinformatics (Oxford, England) 40 (1) (2024)
James Wellnitz, Holli-Joi Sullivan, Mohammad Anwar Hossain, Marielle Rath, Colton Fox, Konstantin I Popov, Timothy M Willson, Eugene N Muratov, Alexander Trospsha
STOPLIGHT: A Hit Scoring Calculator. Journal of chemical information and modeling (2024)
Jarrett M Pelton, Joshua E Hochuli, Patric W Sadecki, Takayuki Katoh, Hiroaki Suga, Leslie M Hicks, Eugene N Muratov, Alexander Trospsha, Albert A Bowers
Cheminformatics-Guided Cell-Free Exploration of Peptide Natural Products. Journal of the American Chemical Society (2024)
Jarrett M Pelton, Joshua E Hochuli, Patric W Sadecki, Takayuki Katoh, Hiroaki Suga, Leslie M Hicks, Eugene N Muratov, Alexander Trospsha, Albert A Bowers
Cheminformatics-Guided Cell-Free Exploration of Peptide Natural Products. Journal of the American Chemical Society 146 (12) (2024)
Jarrett M Pelton, Joshua E Hochuli, Patric W Sadecki, Takayuki Katoh, Hiroaki Suga, Leslie M Hicks, Eugene N Muratov, Alexander Trospsha, Albert A Bowers
Cheminformatics-Guided Cell-Free Exploration of Peptide Natural Products. Journal of the American Chemical Society 146 (12) (2024)
Jon-Michael T Beasley, Daniel R Korn, Nyssa N Tucker, Erick T M Alves, Eugene N Muratov, Chris Bizon, Alexander Trospsha
ExEmPLAR (Extracting, Exploring, and Embedding Pathways Leading to Actionable Research): a user-friendly interface for knowledge graph mining. Bioinformatics (Oxford, England) 40 (1) (2024)
Jarrett M Pelton, Joshua E Hochuli, Patric W Sadecki, Takayuki Katoh, Hiroaki Suga, Leslie M Hicks, Eugene N Muratov, Alexander Trospsha, Albert A Bowers
Cheminformatics-Guided Cell-Free Exploration of Peptide Natural Products. Journal of the American Chemical Society 146 (12) (2024)
Jarrett M Pelton, Joshua E Hochuli, Patric W Sadecki, Takayuki Katoh, Hiroaki Suga, Leslie M Hicks, Eugene N Muratov, Alexander Trospsha, Albert A Bowers
Cheminformatics-Guided Cell-Free Exploration of Peptide Natural Products. Journal of the American Chemical Society 146 (12) (2024)
Marielle Rath, James Wellnitz, Holli-Joi Sullivan, Cleber Melo-Filho, Joshua E Hochuli, Guilherme Martins Silva, Jon-Michael Beasley, Maxfield Travis, Zoe L Sessions, Konstantin I Popov, Alexey V Zakharov, Artem Cherkasov, Vinicius Alves, Eugene N Muratov, Alexander Trospsha
Pharmacokinetics Profiler (PhaKinPro): Model Development, Validation, and Implementation as a Web Tool for Triaging Compounds with Undesired Pharmacokinetics Profiles. Journal of medicinal chemistry 67 (8) (2024)
Holli-Joi Martin, Mohammad Anwar Hossain, James Wellnitz, Enes Kelestemur, Joshua E Hochuli, Sumera Parveen, Cheryl Arrowsmith, Timothy M Willson, Eugene N Muratov, Alexander Tropsha
Heli-SMACC: Helicase-targeting SMAll Molecule Compound Collection. bioRxiv : the preprint server for biology (2024)
Jon-Michael T Beasley, Daniel R Korn, Nyssa N Tucker, Erick T M Alves, Eugene N Muratov, Chris Bizon, Alexander Trospsha
ExEmPLAR (Extracting, Exploring, and Embedding Pathways Leading to Actionable Research): a user-friendly interface for knowledge graph mining. Bioinformatics (Oxford, England) 40 (1) (2024)
Jarrett M Pelton, Joshua E Hochuli, Patric W Sadecki, Takayuki Katoh, Hiroaki Suga, Leslie M Hicks, Eugene N Muratov, Alexander Trospsha, Albert A Bowers
Cheminformatics-Guided Cell-Free Exploration of Peptide Natural Products. Journal of the American Chemical Society 146 (12) (2024)
Jon-Michael T Beasley, Daniel R Korn, Nyssa N Tucker, Erick T M Alves, Eugene N Muratov, Chris Bizon, Alexander Trospsha
ExEmPLAR (Extracting, Exploring, and Embedding Pathways Leading to Actionable Research): a user-friendly interface for knowledge graph mining. Bioinformatics (Oxford, England) 40 (1) (2024)
James Wellnitz, Holli-Joi Sullivan, Mohammad Anwar Hossain, Marielle Rath, Colton Fox, Konstantin I Popov, Timothy M Willson, Eugene N Muratov, Alexander Trospsha
STOPLIGHT: A Hit Scoring Calculator. Journal of chemical information and modeling 64 (11) (2024)
Natália Ferreira de Sousa, Helivaldo Diógenes da Silva Souza, Renata Priscila Barros de Menezes, Francinara da Silva Alves, Chonny Alexander Herrera Acevedo, Thaís Amanda de Lima Nunes, Zoe L Sessions, Luciana Scotti, Eugene N Muratov, Francisco Jaime Bezerra Mendonca Junior, Klinger Antônio da Franca Rodrigues, Petrônio Filgueiras de Athayde Filho, Marcus Tullius Scotti
Selene-Ethylenelacticamides and N -Aryl-Propanamides as Broad-Spectrum Leishmanicidal Agents. Pathogens (Basel, Switzerland) 12 (1) (2023)
Natália Ferreira de Sousa, Helivaldo Diógenes da Silva Souza, Renata Priscila Barros de Menezes, Francinara da Silva Alves, Chonny Alexander Herrera Acevedo, Thaís Amanda de Lima Nunes, Zoe L Sessions, Luciana Scotti, Eugene N Muratov, Francisco Jaime Bezerra Mendonca Junior, Klinger Antônio da Franca Rodrigues, Petrônio Filgueiras de Athayde Filho, Marcus Tullius Scotti
Selene-Ethylenelacticamides and N -Aryl-Propanamides as Broad-Spectrum Leishmanicidal Agents. Pathogens (Basel, Switzerland) 12 (1) (2023)
Amanda Alves de Oliveira, Lívia do Carmo Silva, Bruno Junior Neves, Vinícius Alexandre Fiaia Costa, Eugene N Muratov, Carolina Horta Andrade, Célia Maria de Almeida Soares, Vinicius M Alves, Maristela Pereira
Cheminformatics-driven discovery of hit compounds against Paracoccidioides spp. Future medicinal chemistry (2023)
Vinicius M Alves, Adam Yasgar, James Wellnitz, Ganesha Rai, Marielle Rath, Rodolpho C Braga, Stephen J Capuzzi, Anton Simeonov, Eugene N Muratov, Alexey V Zakharov, Alexander Trospsha
Lies and Liabilities: Computational Assessment of High-Throughput Screening Hits to Identify Artifact Compounds. Journal of medicinal chemistry (2023)
Natália Ferreira de Sousa, Helivaldo Diógenes da Silva Souza, Renata Priscila Barros de Menezes, Francinara da Silva Alves, Chonny Alexander Herrera Acevedo, Thaís Amanda de Lima Nunes, Zoe L Sessions, Luciana Scotti, Eugene N Muratov, Francisco Jaime Bezerra Mendonca Junior, Klinger Antônio da Franca Rodrigues, Petrônio Filgueiras de Athayde Filho, Marcus Tullius Scotti
Selene-Ethylenelacticamides and N -Aryl-Propanamides as Broad-Spectrum Leishmanicidal Agents. Pathogens (Basel, Switzerland) 12 (1) (2023)
Jade Milhomem Lemos, Meryck Felipe Brito da Silva, Alexandra Maria Dos Santos Carvalho, Henric Pietro Vicente Gil, Vinícius Alexandre Fiaia Costa, Carolina Horta Andrade, Rodolpho Campos Braga, Philippe Grellier, Eugene N Muratov, Sébastien Olivier Charneau, José Teófilo Moreira-Filho, Izabela Marques Dourado Bastos, Bruno Junior Neves
Multitask learning-driven identification of novel antitrypanosomal compounds. Future medicinal chemistry (2023)
Natália Ferreira de Sousa, Helivaldo Diógenes da Silva Souza, Renata Priscila Barros de Menezes, Francinara da Silva Alves, Chonny Alexander Herrera Acevedo, Thaís Amanda de Lima Nunes, Zoe L Sessions, Luciana Scotti, Eugene N Muratov, Francisco Jaime Bezerra Mendonca Junior, Klinger Antônio da Franca Rodrigues, Petrônio Filgueiras de Athayde Filho, Marcus Tullius Scotti
Selene-Ethylenelacticamides and N -Aryl-Propanamides as Broad-Spectrum Leishmanicidal Agents. Pathogens (Basel, Switzerland) 12 (1) (2023)
Zoe Sessions, Tesia Bobrowski, Holli-Joi Martin, Jon-Michael T Beasley, Aneri Kothari, Trevor Phares, Michael Li, Vinicius M Alves, Marcus T Scotti, Nathaniel J Moorman, Ralph Baric, Alexander Trospsha, Eugene N Muratov
Praemonitus praemunitus: can we forecast and prepare for future viral disease outbreaks? FEMS microbiology reviews (2023)
Holli-Joi Martin, Cleber C Melo-Filho, Daniel Korn, Richard T Eastman, Ganesha Rai, Anton Simeonov, Alexey V Zakharov, Eugene N Muratov, Alexander Tropsha
Small Molecule Antiviral Compound Collection (SMACC): a database to support the discovery of broad-spectrum antiviral drug molecules. bioRxiv : the preprint server for biology (2022)
Renata Priscila Barros de Menezes, Jéssika de Oliveira Viana, Eugene N Muratov, Luciana Scotti, Marcus Tullius Scotti
Computer-Assisted Discovery of Alkaloids with Schistosomicidal Activity. Current issues in molecular biology 44 (1) (2022)
Joshua E Hochuli, Sankalp Jain, Cleber Melo-Filho, Zoe L Sessions, Tesia Bobrowski, Jun Choe, Johnny Zheng, Richard T Eastman, Daniel C Talley, Ganesha Rai, Anton Simeonov, Alexander Trospsha, Eugene N Muratov, Bolormaa Baljinnyam, Alexey V Zakharov
Allosteric Binders of ACE2 Are Promising Anti-SARS-CoV-2 Agents. ACS pharmacology & translational science 5 (7) (2022)
Melina Mottin, Bruna Katiele de Paula Sousa, Nathalya Cristina de Moraes Roso Mesquita, Ketllyn Irene Zagato de Oliveira, Gabriela Dias Noske, Geraldo Rodrigues Sartori, Aline de Oliveira Albuquerque, Fabio Urbina, Ana C Puhl, José Teófilo Moreira-Filho, Guilherme Eduardo de Souza, Rafael V C Guido, Eugene N Muratov, Bruno Junior Neves, João Herminio Martins Da Silva, Alex E Clark, Jair L Siqueira-Neto, Alexander L Perryman, Glaucius Oliva, Sean Ekins, Carolina Horta Andrade
Discovery of New Zika Protease and Polymerase Inhibitors through the Open Science Collaboration Project OpenZika. Journal of chemical information and modeling (2022)
Vinicius M Alves, Joyce V B Borba, Rodolpho C Braga, Daniel R Korn, Nicole C Kleinstreuer, Kevin Causey, Alexander Tropsha, Diego Rua, Eugene N Muratov
PreS/MD: Predictor of Sensitization Hazard for Chemical Substances Released From Medical Devices. Toxicological sciences : an official journal of the Society of Toxicology 189 (2) (2022)
Joyce Villa Verde Bastos Borba, Vinicius M Alves, Rodolpho C Braga, Daniel R Korn, Kirsten Overdahl, Arthur C Silva, Steven U S Hall, Erik Overdahl, Nicole C Kleinstreuer, Judy Strickland, David Allen, Carolina Horta Andrade, Eugene N Muratov, Alexander Trospsha
STopTox: An in Silico Alternative to Animal Testing for Acute Systemic and Topical Toxicity. Environmental health perspectives 130 (2) (2022)
Tesia M Bobrowski, Daniel R Korn, Eugene N Muratov, Alexander Trospsha
ZINC Express: A Virtual Assistant for Purchasing Compounds Annotated in the ZINC Database. Journal of chemical information and modeling 61 (3) (2021)
Renan P O Costa, Lucas F Lucena, Lorena Mara A Silva, Guilherme Julião Zocolo, Chonny Herrera-Acevedo, Luciana Scotti, Fernando Batista Da-Costa, Nikita Ionov, Vladimir V Poroikov, Eugene N Muratov, Marcus Tullius Scotti
The SistematX Web Portal of Natural Products: An Update. Journal of chemical information and modeling 61 (6) (2021)
Francisco Jaime Bezerra Mendonca Junior, Marcus Tullius Scotti, Eugene N Muratov, Luciana Scotti, Anuraj Nayarisseri
Natural Bioactive Products with Antioxidant Properties Useful in Neurodegenerative Diseases 2020. Oxidative medicine and cellular longevity 2021 (2021)
Daniel Korn, Vera Pervitsky, Tesia Bobrowski, Vinicius M Alves, Charles Schmitt, Chris Bizon, Nancy Baker, Rada Chirkova, Artem Cherkasov, Eugene N Muratov, Alexander Trospsha
COVID-19 Knowledge Extractor (COKE): A Curated Repository of Drug-Target Associations Extracted from the CORD-19 Corpus of Scientific Publications on COVID-19. Journal of chemical information and modeling (2021)
Sankalp Jain, Vishal B Siramshetty, Vinicius M Alves, Eugene N Muratov, Nicole C Kleinstreuer, Alexander Trospsha, Marc C Nicklaus, Anton Simeonov, Alexey V Zakharov
Large-Scale Modeling of Multispecies Acute Toxicity End Points Using Consensus of Multitask Deep Learning Methods. Journal of chemical information and modeling 61 (2) (2021)
Joyce Villa Verde Bastos Borba, Rodolpho Campos Braga, Vinicius M Alves, Eugene N Muratov, Nicole C Kleinstreuer, Alexander Trospsha, Carolina Horta Andrade
Pred-Skin: A Web Portal for Accurate Prediction of Human Skin Sensitizers. Chemical research in toxicology 34 (2) (2020)
Bruno Junior Neves, Rodolpho Campos Braga, Vinicius M Alves, Marília N N Lima, Gustavo C Cassiano, Eugene N Muratov, Fabio Trindade Maranhão Costa, Carolina Horta Andrade
Deep Learning-driven research for drug discovery: Tackling Malaria. PLoS computational biology 16 (2) (2020)
Fleur M Ferguson, Yan Liu, Wayne Harshbarger, Ling Huang, Jinhua Wang, Xianming Deng, Stephen J Capuzzi, Eugene N Muratov, Alexander Trospsha, Senthil Muthuswamy, Kenneth D Westover, Nathanael S Gray
Synthesis and Structure-Activity Relationships of DCLK1 Kinase Inhibitors Based on a 5,11-Dihydro-6H-benzo[e]pyrimido[5,4-b][1,4]diazepin-6-one Scaffold. Journal of medicinal chemistry 63 (14) (2020)
Fleur M Ferguson, Yan Liu, Wayne Harshbarger, Ling Huang, Jinhua Wang, Xianming Deng, Stephen J Capuzzi, Eugene N Muratov, Alexander Trospsha, Senthil Muthuswamy, Kenneth D Westover, Nathanael S Gray
Correction to "Synthesis and Structure-Activity Relationships of DCLK1 Kinase Inhibitors Based on a 5,11-Dihydro-6H-benzo[e]pyrimido[5,4-b][1,4]diazepin-6-one Scaffold". Journal of medicinal chemistry 63 (17) (2020)
Vinicius M Alves, Tesia Bobrowski, Cleber C Melo-Filho, Daniel Korn, Scott Auerbach, Charles Schmitt, Eugene N Muratov, Alexander Tropsha
QSAR Modeling of SARS-CoV Mpro Inhibitors Identifies Sufugolix, Cenicriviroc, Proglumetacin, and other Drugs as Candidates for Repurposing against SARS-CoV-2. Molecular informatics 40 (1) (2020)
Vinicius M Alves, Stephen J Capuzzi, Rodolpho C Braga, Daniel Korn, Joshua E Hochuli, Kyle H Bowler, Adam Yasgar, Ganesha Rai, Anton Simeonov, Eugene N Muratov, Alexey V Zakharov, Alexander Trospsha
SCAM Detective: Accurate Predictor of Small, Colloidally Aggregating Molecules. Journal of chemical information and modeling 60 (8) (2020)
Gabriela Cristina Soares Rodrigues, Mayara Dos Santos Maia, Eugene N Muratov, Luciana Scotti, Marcus Tullius Scotti
Quantitative Structure-Activity Relationship Modeling and Docking of Monoterpenes with Insecticidal Activity Against Reticulitermes chinensis Snyder and Drosophila melanogaster. Journal of agricultural and food chemistry 68 (16) (2020)
Mikołaj Mizera, Eugene N Muratov, Vinicius M Alves, Alexander Tropsha, Judyta Cielecka-Piontek
Computer-Aided Discovery of New Solubility-Enhancing Drug Delivery System. Biomolecules 10 (6) (2020)
Vinicius M Alves, Duhyeong Hwang, Eugene N Muratov, Marina Sokolsky-Papkov, Ekaterina Varlamova, Natasha Vinod, Chaemin Lim, Carolina H Andrade, Alexander Trospsha, Alexander Kabanov
Cheminformatics-driven discovery of polymeric micelle formulations for poorly soluble drugs. Science advances 5 (6) (2019)
Vinicius M Alves, Alexander Golbraikh, Stephen J Capuzzi, Kammy Liu, Wai In Lam, Daniel Robert Korn, Diane Pozefsky, Carolina Horta Andrade, Eugene N Muratov, Alexander Trospsha
Multi-Descriptor Read Across (MuDRA): A Simple and Transparent Approach for Developing Accurate Quantitative Structure-Activity Relationship Models. Journal of chemical information and modeling 58 (6) (2018)
Stephen J Capuzzi, Wei Sun, Eugene N Muratov, Carles Martínez-Romero, Shihua He, Wenjun Zhu, Hao Li, Gregory Tawa, Ethan G Fisher, Miao Xu, Paul Shinn, Xiangguo Qiu, Adolfo García-Sastre, Wei Zheng, Alexander Trospsha
Computer-Aided Discovery and Characterization of Novel Ebola Virus Inhibitors. Journal of medicinal chemistry 61 (8) (2018)
Yen S Low, Vinicius M Alves, Denis Fourches, Alexander Sedykh, Carolina Horta Andrade, Eugene N Muratov, Ivan Rusyn, Alexander Trospsha
Chemistry-Wide Association Studies (CWAS): A Novel Framework for Identifying and Interpreting Structure-Activity Relationships. Journal of chemical information and modeling 58 (11) (2018)
Stephen J Capuzzi, Thomas E Thornton, Kammy Liu, Nancy Baker, Wai In Lam, Colin P O'Banion, Eugene N Muratov, Diane Pozefsky, Alexander Trospsha
Chemotext: A Publicly Available Web Server for Mining Drug-Target-Disease Relationships in PubMed. Journal of chemical information and modeling 58 (2) (2018)