Mihaly Varadi

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 17

Top Venues

Current protocols

Nucleic acids research

Scientific reports

Database : the journal of biological databases and curation

European Bioinformatics Institute

Vrije Universiteit Brussel (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

European Bioinformatics Institute Oct 01 2019

United Kingdom

Project Leader :: PDBe

European Bioinformatics Institute Oct 01 2015 - Sep 30 2019

United Kingdom

Scientific Programmer :: PDBe

Vrije Universiteit Brussel Aug 29 2011 - Oct 01 2015

Belgium

Computational Biologist :: Structural Biology Research Center

Hungarian Academy of Sciences Dec 01 2010 - Aug 28 2011

Hungary

Computational biologist :: Institute of Enzymology

Education History

Vrije Universiteit Brussel Sep 01 2012 - Feb 04 2016

Belgium

PHD :: Structural Biology Research Center

Szent Istvan Egyetem Allatorvos-tudomanyi Kar Sep 01 2005 - May 30 2011

Hungary

MSC

Publications

Sebastian Bittrich, Adam Midlik, Mihaly Varadi, Sameer Velankar, Stephen K Burley, Jasmine Y Young, David Sehnal, Brinda Vallat
Describing and Sharing Molecular Visualizations Using the MolViewSpec Toolkit. Current protocols 4 (7) (2024)
Paulyna Magaña, Sreenath Nair, Mihaly Varadi, Sameer Velankar
Harnessing the 3D-Beacons Network: A Comprehensive Guide to Accessing and Displaying Protein Structure Data. Current protocols 4 (5) (2024)
Sebastian Bittrich, Adam Midlik, Mihaly Varadi, Sameer Velankar, Stephen K Burley, Jasmine Y Young, David Sehnal, Brinda Vallat
Describing and Sharing Molecular Visualizations Using the MolViewSpec Toolkit. Current protocols 4 (7) (2024)
Joseph I J Ellaway, Stephen Anyango, Sreenath Nair, Hossam A Zaki, Nurul Nadzirin, Harold R Powell, Aleksandras Gutmanas, Mihaly Varadi, Sameer Velankar
Identifying protein conformational states in the Protein Data Bank: Toward unlocking the potential of integrative dynamics studies. Structural dynamics (Melville, N.Y.) 11 (3) (2024)
Preeti Choudhary, Zukang Feng, John Berrisford, Henry Chao, Yasuyo Ikegawa, Ezra Peisach, Dennis W Piehl, James Smith, Ahsan Tanweer, Mihaly Varadi, John D Westbrook, Jasmine Y Young, Ardan Patwardhan, Kyle L Morris, Jeffrey C Hoch, Genji Kurisu, Sameer Velankar, Stephen K Burley
PDB NextGen Archive: centralizing access to integrated annotations and enriched structural information by the Worldwide Protein Data Bank. Database : the journal of biological databases and curation 2024 (2024)
Preeti Choudhary, Zukang Feng, John Berrisford, Henry Chao, Yasuyo Ikegawa, Ezra Peisach, Dennis W Piehl, James Smith, Ahsan Tanweer, Mihaly Varadi, John D Westbrook, Jasmine Y Young, Ardan Patwardhan, Kyle L Morris, Jeffrey C Hoch, Genji Kurisu, Sameer Velankar, Stephen K Burley
PDB NextGen Archive: centralizing access to integrated annotations and enriched structural information by the Worldwide Protein Data Bank. Database : the journal of biological databases and curation 2024 (2024)
Sebastian Bittrich, Adam Midlik, Mihaly Varadi, Sameer Velankar, Stephen K Burley, Jasmine Y Young, David Sehnal, Brinda Vallat
Describing and Sharing Molecular Visualizations Using the MolViewSpec Toolkit. Current protocols 4 (7) (2024)
Joseph I J Ellaway, Stephen Anyango, Sreenath Nair, Hossam A Zaki, Nurul Nadzirin, Harold R Powell, Aleksandras Gutmanas, Mihaly Varadi, Sameer Velankar
Identifying protein conformational states in the Protein Data Bank: Toward unlocking the potential of integrative dynamics studies. Structural dynamics (Melville, N.Y.) 11 (3) (2024)
Mihaly Varadi, Maxim Tsenkov, Sameer Velankar
Challenges in bridging the gap between protein structure prediction and functional interpretation. Proteins (2023)
Matthew Thakur, Annalisa Buniello, Catherine Brooksbank, Kim T Gurwitz, Matthew Hall, Matthew Hartley, David G Hulcoop, Andrew R Leach, Diana Marques, Maria Martin, Aziz Mithani, Ellen M McDonagh, Euphemia Mutasa-Gottgens, David Ochoa, Yasset Perez Riverol, James David Stephenson, Mihaly Varadi, Sameer Velankar, Juan Antonio Vizcaino, Rick Witham, Johanna McEntyre
EMBL's European Bioinformatics Institute (EMBL-EBI) in 2023. Nucleic acids research (2023)
Mihaly Varadi, Damian Bertoni, Paulyna Magana, Urmila Paramval, Ivanna Pidruchna, Malarvizhi Radhakrishnan, Maxim Tsenkov, Sreenath Nair, Milot Mirdita, Jingi Yeo, Oleg Kovalevskiy, Kathryn Tunyasuvunakool, Agata Laydon, Augustin Žídek, Hamish Tomlinson, Dhavanthi Hariharan, Josh Abrahamson, Tim Green, John Jumper, Ewan Birney, Martin Steinegger, Demis Hassabis, Sameer Velankar
AlphaFold Protein Structure Database in 2024: providing structure coverage for over 214 million protein sequences. Nucleic acids research (2023)
Mihaly Varadi, Stephen Anyango, Sri Devan Appasamy, David Armstrong, Marcus Bage, John Berrisford, Preeti Choudhary, Damian Bertoni, Mandar Deshpande, Grisell Diaz Leines, Joseph Ellaway, Genevieve Evans, Romana Gaborova, Deepti Gupta, Aleksandras Gutmanas, Deborah Harrus, Gerard J Kleywegt, Weslley Morellato Bueno, Nurul Nadzirin, Sreenath Nair, Lukas Pravda, Marcelo Querino Lima Afonso, David Sehnal, Ahsan Tanweer, James Tolchard, Charlotte Abrams, Roisin Dunlop, Sameer Velankar
PDBe and PDBe-KB: Providing high-quality, up-to-date and integrated resources of macromolecular structures to support basic and applied research and education. Protein science : a publication of the Protein Society 31 (10) (2022)
Mihaly Varadi, Sreenath Nair, Ian Sillitoe, Gerardo Tauriello, Stephen Anyango, Stefan Bienert, Clemente Borges, Mandar S Deshpande, Tim Green, Demis Hassabis, Andras Hatos, Tamás Hegedűs, Maarten L Hekkelman, Robbie P Joosten, John M Jumper, Agata Laydon, Dmitry S Molodenskiy, Damiano Piovesan, Edoardo Salladini, Steven L Salzberg, Markus J Sommer, Martin Steinegger, Erzsebet Suhajda, Dmitri I Svergun, Luiggi Tenorio-Ku, Silvio C E Tosatto, Kathryn Tunyasuvunakool, Andrew Mark Waterhouse, Augustin Žídek, Torsten Schwede, Christine A Orengo, Sameer Velankar
3D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources. GigaScience 11 (2022)
Hedvig Tordai, Erzsebet Suhajda, Ian Sillitoe, Sreenath Nair, Mihaly Varadi, Tamás Hegedűs
Comprehensive Collection and Prediction of ABC Transmembrane Protein Structures in the AI Era of Structural Biology. International journal of molecular sciences 23 (16) (2022)
Mihaly Varadi, Stephen Anyango, Mandar S Deshpande, Sreenath Nair, Cindy Natassia, Galabina Yordanova, David Yuan, Oana Stroe, Gemma Wood, Agata Laydon, Augustin Žídek, Tim Green, Kathryn Tunyasuvunakool, Stig Petersen, John Jumper, Ellen Clancy, Richard Green, Ankur Vora, Mira Lutfi, Michael Figurnov, Andrew Cowie, Nicole Hobbs, Pushmeet Kohli, Gerard Kleywegt, Ewan Birney, Demis Hassabis, Sameer Velankar
AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models. Nucleic acids research (2021)
Simone Kosol, Sara Contreras-Martos, Alessandro Piai, Mihaly Varadi, Tamas Lazar, Angéla Békési, Pierre Lebrun, Isabella C Felli, Roberta Pierattelli, Peter Tompa
Interaction between the scaffold proteins CBP by IQGAP1 provides an interface between gene expression and cytoskeletal activity. Scientific reports 10 (1) (2020)
Sara Contreras-Martos, Alessandro Piai, Simone Kosol, Mihaly Varadi, Angela Bekesi, Pierre Lebrun, Alexander N Volkov, Kris Gevaert, Roberta Pierattelli, Isabella C Felli, Peter Tompa
Linking functions: an additional role for an intrinsically disordered linker domain in the transcriptional coactivator CBP. Scientific reports 7 (1) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Mihaly Varadi