Itzhak Mizrahi (Itzik Mizrahi)

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 39

Top Topics

Mass Spectrometry

Pluripotent Stem Cells

Genetic Diversity

Top Venues

Nature communications

The ISME journal

Science (New York, N.Y.)

Nature microbiology

This page only lists publications with an associated author ORCID identifier.

Publications

Alvah Zorea, David Pellow, Liron Levin, Shai Pilosof, Jonathan Friedman, Ron Shamir, Itzhak Mizrahi
Plasmids in the human gut reveal neutral dispersal and recombination that is overpowered by inflammatory diseases. Nature communications 15 (1) (2024)
Alvah Zorea, David Pellow, Liron Levin, Shai Pilosof, Jonathan Friedman, Ron Shamir, Itzhak Mizrahi
Plasmids in the human gut reveal neutral dispersal and recombination that is overpowered by inflammatory diseases. Nature communications 15 (1) (2024)
Rasmus O Jensen, Frederik Schulz, Simon Roux, Dawn M Klingeman, Wayne P Mitchell, Daniel Udwary, Sarah Moraïs, Vinicio Reynoso, James Winkler, Shilpa Nagaraju, Sashini De Tissera, Nicole Shapiro, Natalia N Ivanova, T B K Reddy, Itzhak Mizrahi, Sagar M Utturkar, Edward A Bayer, Tanja Woyke, Nigel J Mouncey, Michael C Jewett, Séan D Simpson, Michael Koepke, David T Jones, Steven D Brown
Phylogenomics and genetic analysis of solvent-producing Clostridium species. Scientific data 11 (1) (2024)
Sarah Moraïs, Sarah Winkler, Alvah Zorea, Liron Levin, Falk S P Nagies, Nils Kapust, Eva Lamed, Avital Artan-Furman, David N Bolam, Madhav P Yadav, Edward A Bayer, William F Martin, Itzhak Mizrahi
Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans. Science (New York, N.Y.) 383 (6688) (2024)
Sarah Moraïs, Sarah Winkler, Alvah Zorea, Liron Levin, Falk S P Nagies, Nils Kapust, Eva Lamed, Avital Artan-Furman, David N Bolam, Madhav P Yadav, Edward A Bayer, William F Martin, Itzhak Mizrahi
Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans. Science (New York, N.Y.) 383 (6688) (2024)
Rasmus O Jensen, Frederik Schulz, Simon Roux, Dawn M Klingeman, Wayne P Mitchell, Daniel Udwary, Sarah Moraïs, Vinicio Reynoso, James Winkler, Shilpa Nagaraju, Sashini De Tissera, Nicole Shapiro, Natalia N Ivanova, T B K Reddy, Itzhak Mizrahi, Sagar M Utturkar, Edward A Bayer, Tanja Woyke, Nigel J Mouncey, Michael C Jewett, Séan D Simpson, Michael Koepke, David T Jones, Steven D Brown
Phylogenomics and genetic analysis of solvent-producing Clostridium species. Scientific data 11 (1) (2024)
Sarah Moraïs, Sarah Winkler, Alvah Zorea, Liron Levin, Falk S P Nagies, Nils Kapust, Eva Lamed, Avital Artan-Furman, David N Bolam, Madhav P Yadav, Edward A Bayer, William F Martin, Itzhak Mizrahi
Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans. Science (New York, N.Y.) 383 (6688) (2024)
Alvah Zorea, David Pellow, Liron Levin, Shai Pilosof, Jonathan Friedman, Ron Shamir, Itzhak Mizrahi
Plasmids in the human gut reveal neutral dispersal and recombination that is overpowered by inflammatory diseases. Nature communications 15 (1) (2024)
Alvah Zorea, David Pellow, Liron Levin, Shai Pilosof, Jonathan Friedman, Ron Shamir, Itzhak Mizrahi
Plasmids in the human gut reveal neutral dispersal and recombination that is overpowered by inflammatory diseases. Nature communications 15 (1) (2024)
Rasmus O Jensen, Frederik Schulz, Simon Roux, Dawn M Klingeman, Wayne P Mitchell, Daniel Udwary, Sarah Moraïs, Vinicio Reynoso, James Winkler, Shilpa Nagaraju, Sashini De Tissera, Nicole Shapiro, Natalia N Ivanova, T B K Reddy, Itzhak Mizrahi, Sagar M Utturkar, Edward A Bayer, Tanja Woyke, Nigel J Mouncey, Michael C Jewett, Séan D Simpson, Michael Koepke, David T Jones, Steven D Brown
Phylogenomics and genetic analysis of solvent-producing Clostridium species. Scientific data 11 (1) (2024)
Sarah Moraïs, Sarah Winkler, Alvah Zorea, Liron Levin, Falk S P Nagies, Nils Kapust, Eva Lamed, Avital Artan-Furman, David N Bolam, Madhav P Yadav, Edward A Bayer, William F Martin, Itzhak Mizrahi
Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans. Science (New York, N.Y.) 383 (6688) (2024)
Sarah Moraïs, Sarah Winkler, Alvah Zorea, Liron Levin, Falk S P Nagies, Nils Kapust, Eva Lamed, Avital Artan-Furman, David N Bolam, Madhav P Yadav, Edward A Bayer, William F Martin, Itzhak Mizrahi
Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans. Science (New York, N.Y.) 383 (6688) (2024)
Sarah Moraïs, Sarah Winkler, Alvah Zorea, Liron Levin, Falk S P Nagies, Nils Kapust, Eva Lamed, Avital Artan-Furman, David N Bolam, Madhav P Yadav, Edward A Bayer, William F Martin, Itzhak Mizrahi
Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans. Science (New York, N.Y.) 383 (6688) (2024)
Alvah Zorea, David Pellow, Liron Levin, Shai Pilosof, Jonathan Friedman, Ron Shamir, Itzhak Mizrahi
Plasmids in the human gut reveal neutral dispersal and recombination that is overpowered by inflammatory diseases. Nature communications 15 (1) (2024)
Sarah Moraïs, Michael Mazor, Omar Tovar-Herrera, Tamar Zehavi, Alvah Zorea, Morya Ifrach, David Bogumil, Alexander Brandis, Jens Walter, Natalie Elia, Eyal Gur, Itzhak Mizrahi
Plasmid-encoded toxin defence mediates mutualistic microbial interactions. Nature microbiology 9 (1) (2023)
Julie Teresa Shapiro, Alvah Zorea, Aya Brown Kav, Vicente J Ontiveros, Itzhak Mizrahi, Shai Pilosof
Multilayer networks of plasmid genetic similarity reveal potential pathways of gene transmission. The ISME journal (2023)
Sarah Moraïs, Michael Mazor, Omar Tovar-Herrera, Tamar Zehavi, Alvah Zorea, Morya Ifrach, David Bogumil, Alexander Brandis, Jens Walter, Natalie Elia, Eyal Gur, Itzhak Mizrahi
Plasmid-encoded toxin defence mediates mutualistic microbial interactions. Nature microbiology 9 (1) (2023)
Benedikt H Wimmer, Sarah Moraïs, Ran Zalk, Itzhak Mizrahi, Ohad Medalia
Phylogenetic diversity of core rumen microbiota as described by cryo-ET. microLife 4 (2023)
Sarah Moraïs, Michael Mazor, Omar Tovar-Herrera, Tamar Zehavi, Alvah Zorea, Morya Ifrach, David Bogumil, Alexander Brandis, Jens Walter, Natalie Elia, Eyal Gur, Itzhak Mizrahi
Plasmid-encoded toxin defence mediates mutualistic microbial interactions. Nature microbiology 9 (1) (2023)
Julie Teresa Shapiro, Alvah Zorea, Aya Brown Kav, Vicente J Ontiveros, Itzhak Mizrahi, Shai Pilosof
Multilayer networks of plasmid genetic similarity reveal potential pathways of gene transmission. The ISME journal (2023)
Sarah Moraïs, Michael Mazor, Omar Tovar-Herrera, Tamar Zehavi, Alvah Zorea, Morya Ifrach, David Bogumil, Alexander Brandis, Jens Walter, Natalie Elia, Eyal Gur, Itzhak Mizrahi
Plasmid-encoded toxin defence mediates mutualistic microbial interactions. Nature microbiology (2023)
Dikla Nachmias, Nataly Melnikov, Alvah Zorea, Maya Sharon, Reut Yemini, Yasmin De-Picchoto, Ioannis Tsirkas, Amir Aharoni, Béla P Frohn, Petra Schwille, Raz Zarivach, Itzhak Mizrahi, Natalie Elia
Asgard ESCRT-III and VPS4 reveal conserved chromatin binding properties of the ESCRT machinery. The ISME journal (2022)
Goor Sasson, Sarah Moraïs, Fotini Kokou, Kristina Plate, Anke Trautwein-Schult, Elie Jami, Edward A Bayer, Dörte Becher, Itzhak Mizrahi
Metaproteome plasticity sheds light on the ecology of the rumen microbiome and its connection to host traits. The ISME journal 16 (11) (2022)
Derek M Bickhart, Mikhail Kolmogorov, Elizabeth Tseng, Daniel M Portik, Anton Korobeynikov, Ivan Tolstoganov, Gherman Uritskiy, Ivan Liachko, Shawn T Sullivan, Sung Bong Shin, Alvah Zorea, Victòria Pascal Andreu, Kevin Panke-Buisse, Marnix H Medema, Itzhak Mizrahi, Pavel A Pevzner, Timothy P L Smith
Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities. Nature biotechnology 40 (5) (2022)
Meltem Tatli, Sarah Moraïs, Omar E Tovar-Herrera, Yannick J Bomble, Edward A Bayer, Ohad Medalia, Itzhak Mizrahi
Nanoscale resolution of microbial fiber degradation in action. eLife 11 (2022)
Itzhak Mizrahi, Elie Jami
A method to the madness: Disentangling the individual forces that shape the rumen microbiome. EMBO reports 22 (2) (2021)
Ronnie Solomon, Tanita Wein, Bar Levy, Shahar Eshed, Rotem Dror, Veronica Reiss, Tamar Zehavi, Ori Furman, Itzhak Mizrahi, Elie Jami
Protozoa populations are ecosystem engineers that shape prokaryotic community structure and function of the rumen microbial ecosystem. The ISME journal (2021)
Itzhak Mizrahi, R John Wallace, Sarah Moraïs
The rumen microbiome: balancing food security and environmental impacts. Nature reviews. Microbiology 19 (9) (2021)
Rachel Gregor, Maraike Probst, Stav Eyal, Alexander Aksenov, Goor Sasson, Igal Horovitz, Pieter C Dorrestein, Michael M Meijler, Itzhak Mizrahi
Mammalian gut metabolomes mirror microbiome composition and host phylogeny. The ISME journal 16 (5) (2021)
Daniel Petras, Vanessa V Phelan, Deepa Acharya, Andrew Ellis Allen, Allegra T Aron, Nuno Bandeira, Benjamin P Bowen, Deirdre Belle-Oudry, Simon Boecker, Dale A Cummings, Jessica M Deutsch, Eoin Fahy, Neha Garg, Rachel Gregor, Jo Handelsman, Mirtha Navarro-Hoyos, Alan K Jarmusch, Scott Alexander Jarmusch, Katherine Louie, Katherine N Maloney, Michael Thomas Marty, Michael M Meijler, Itzhak Mizrahi, Rachel L Neve, Trent R Northen, Carlos Molina-Santiago, Morgan Panitchpakdi, Benjamin S Pullman, Aaron W Puri, Robin Schmid, Shankar Subramaniam, Monica Thukral, Felipe Vasquez-Castro, Pieter C Dorrestein, Mingxun Wang
GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser. Nature methods (2021)
Ori Furman, Liat Shenhav, Goor Sasson, Fotini Kokou, Hen Honig, Shamay Jacoby, Tomer Hertz, Otto X Cordero, Eran Halperin, Itzhak Mizrahi
Stochasticity constrained by deterministic effects of diet and age drive rumen microbiome assembly dynamics. Nature communications 11 (1) (2020)
Leonora S Bittleston, Matti Gralka, Gabriel E Leventhal, Itzhak Mizrahi, Otto X Cordero
Context-dependent dynamics lead to the assembly of functionally distinct microbial communities. Nature communications 11 (1) (2020)
Yonit Ben-David, Sarah Moraïs, Edward A Bayer, Itzhak Mizrahi
Rapid adaptation for fibre degradation by changes in plasmid stoichiometry within Lactobacillus plantarum at the synthetic community level. Microbial biotechnology 13 (6) (2020)
Alexander A Aksenov, Ivan Laponogov, Zheng Zhang, Sophie L F Doran, Ilaria Belluomo, Dennis Veselkov, Wout Bittremieux, Louis-Felix Nothias, Mélissa Nothias-Esposito, Katherine N Maloney, Biswapriya B Misra, Alexey V Melnik, Aleksandr Smirnov, Xiuxia Du, Kenneth L Jones, Kathleen Dorrestein, Morgan Panitchpakdi, Madeleine Ernst, Justin Johan Jozias van der Hooft, Mabel Gonzalez, Chiara Carazzone, Adolfo Amézquita, Chris Callewaert, James T Morton, Robert A Quinn, Amina Bouslimani, Andrea Albarracín Orio, Daniel Petras, Andrea M Smania, Sneha P Couvillion, Meagan C Burnet, Carrie D Nicora, Erika M Zink, Thomas O Metz, Viatcheslav Artaev, Elizabeth Humston-Fulmer, Rachel Gregor, Michael M Meijler, Itzhak Mizrahi, Stav Eyal, Brooke Anderson, Rachel Dutton, Raphaël Lugan, Pauline Le Boulch, Yann Guitton, Stephanie Prevost, Audrey Poirier, Gaud Dervilly, Abdoulaye Zié Koné, Aaron Fait, Noga Sikron Persi, Chao Song, Kelem Gashu, Roxana Coras, Monica Guma, Julia Manasson, Jose U Scher, Dinesh Kumar Barupal, Saleh Alseekh, Alisdair Robert Fernie, Reza Mirnezami, Vasilis Vasiliou, Robin Schmid, Roman S Borisov, Larisa N Kulikova, Rob Knight, Mingxun Wang, George B Hanna, Pieter C Dorrestein, Kirill Veselkov
Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data. Nature biotechnology 39 (2) (2020)
David Pellow, Itzhak Mizrahi, Ron Shamir
PlasClass improves plasmid sequence classification. PLoS computational biology 16 (4) (2020)
Aya Brown Kav, Roye Rozov, David Bogumil, Søren Johannes Sørensen, Lars Hestbjerg Hansen, Itai Benhar, Eran Halperin, Ron Shamir, Itzhak Mizrahi
Unravelling plasmidome distribution and interaction with its hosting microbiome. Environmental microbiology 22 (1) (2019)
Fotini Kokou, Goor Sasson, Jonathan Friedman, Stav Eyal, Ofer Ovadia, Sheenan Harpaz, Avner Cnaani, Itzhak Mizrahi
Core gut microbial communities are maintained by beneficial interactions and strain variability in fish. Nature microbiology 4 (12) (2019)
R John Wallace, Goor Sasson, Philip C Garnsworthy, Ilma Tapio, Emma Gregson, Paolo Bani, Pekka Huhtanen, Ali R Bayat, Francesco Strozzi, Filippo Biscarini, Timothy J Snelling, Neil Saunders, Sarah L Potterton, James Craigon, Andrea Minuti, Erminio Trevisi, Maria Luisa Callegari, Fiorenzo Piccioli Cappelli, Edward H Cabezas-Garcia, Johanna Vilkki, Cesar Pinares-Patino, Kateřina Olša Fliegerová, Jakub Mrázek, Hana Sechovcová, Jan Kopečný, Aurélie Bonin, Frédéric Boyer, Pierre Taberlet, Fotini Kokou, Eran Halperin, John Lewis Williams, Kevin J Shingfield, Itzhak Mizrahi
A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions. Science advances 5 (7) (2019)
Fotini Kokou, Goor Sasson, Tali Nitzan, Adi Doron-Faigenboim, Sheenan Harpaz, Avner Cnaani, Itzhak Mizrahi
Host genetic selection for cold tolerance shapes microbiome composition and modulates its response to temperature. eLife 7 (2018)