Thomas Richard Connor (Tom Connor, Thomas Connor, Thomas R Connor)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 26

Top Venues

Virus evolution

Nature communications

Microbiology resource announcements

Science (New York, N.Y.)

Cardiff University

Imperial College London (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Cardiff University Sep 01 2018

United Kingdom

Reader :: School of Biosciences

Public Health Wales Jul 01 2016

United Kingdom

Honorary Consultant Bioinformatician :: Microbiology

Cardiff University Sep 01 2014 - Aug 31 2018

United Kingdom

Senior Lecturer :: School of Biosciences

Cardiff University Nov 01 2012 - Aug 31 2014

United Kingdom

Lecturer :: School of Biosciences

Wellcome Trust Sanger Institute Nov 01 2010 - Nov 01 2012

United Kingdom

Postdoctoral Fellow :: Pathogen Genomics

Imperial College London Oct 01 2005 - Sep 30 2006

United Kingdom

Research Associate :: Infectious Disease Epidemiology

Education History

Imperial College London Oct 01 2006 - Sep 30 2010

United Kingdom

PHD :: Infectious Disease Epidemiology

Imperial College London Oct 01 2004 - Sep 30 2005

United Kingdom

MSC :: Bioinformatics

University of Nottingham Oct 01 2001 - Jul 16 2004

United Kingdom

BSC :: Biochemistry and Genetics

Publications

Rhys T White, Matthew J Bull, Clare R Barker, Julie M Arnott, Mandy Wootton, Lim S Jones, Robin A Howe, Mari Morgan, Melinda M Ashcroft, Brian M Forde, Thomas Richard Connor, Scott A Beatson
Genomic epidemiology reveals geographical clustering of multidrug-resistant Escherichia coli ST131 associated with bacteraemia in Wales. Nature communications 15 (1) (2024)
Rhys T White, Matthew J Bull, Clare R Barker, Julie M Arnott, Mandy Wootton, Lim S Jones, Robin A Howe, Mari Morgan, Melinda M Ashcroft, Brian M Forde, Thomas Richard Connor, Scott A Beatson
Genomic epidemiology reveals geographical clustering of multidrug-resistant Escherichia coli ST131 associated with bacteraemia in Wales. Nature communications 15 (1) (2024)
Rhys T White, Matthew J Bull, Clare R Barker, Julie M Arnott, Mandy Wootton, Lim S Jones, Robin A Howe, Mari Morgan, Melinda M Ashcroft, Brian M Forde, Thomas Richard Connor, Scott A Beatson
Genomic epidemiology reveals geographical clustering of multidrug-resistant Escherichia coli ST131 associated with bacteraemia in Wales. Nature communications 15 (1) (2024)
Rhys T White, Matthew J Bull, Clare R Barker, Julie M Arnott, Mandy Wootton, Lim S Jones, Robin A Howe, Mari Morgan, Melinda M Ashcroft, Brian M Forde, Thomas Richard Connor, Scott A Beatson
Genomic epidemiology reveals geographical clustering of multidrug-resistant Escherichia coli ST131 associated with bacteraemia in Wales. Nature communications 15 (1) (2024)
Joseph L-H Tsui, John T McCrone, Ben C Lambert, Sumali Bajaj, Rhys P D Inward, Paolo Bosetti, Rosario Evans Pena, Houriiyah Tegally, Verity Hill, Alexander Eugene Zarebski, Thomas P Peacock, Luyang Liu, Neo Wu, Megan Davis, Issac I Bogoch, Kamran Khan, Meaghan Kall, Nurin Iwani Binti Abdul Aziz, Rachel Colquhoun, Áine Niamh O'Toole, Benjamin C Jackson, Abhishek Dasgupta, Eduan Wilkinson, Tulio de Oliveira, null null, Thomas Richard Connor, Nicholas James Loman, Vittoria Colizza, Christophe Fraser, Erik M Volz, Xiang Ji, Bernardo Gutierrez, Meera Chand, Simon Dellicour, Simon Cauchemez, Jayna Ragwani, Marc A Suchard, Philippe Lemey, Andrew Rambaut, Oliver George Pybus, Moritz U G Kraemer
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1. Science (New York, N.Y.) 381 (6655) (2023)
Andrew H Mack, Georgina Menzies, Alex Southgate, D Dafydd Jones, Thomas Richard Connor
A proofreading mutation with an allosteric effect allows a cluster SARS-CoV-2 viruses to rapidly evolve. Molecular biology and evolution (2023)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Emma J Griffiths, Ruth E Timme, Catarina Inês Mendes, Andrew J Page, Nabil-Fareed Alikhan, Daniel Fornika, Finlay Maguire, Josefina Campos, Daniel J Park, Idowu Bolade Olawoye, Paul E Oluniyi, Dominique Anderson, Sarel Malan, Anders Gonçalves da Silva, Rhiannon Cameron, Damion M Dooley, Lee S Katz, Allison Black, Ilene Karsch-Mizrachi, Tanya Barrett, Anjanette Johnston, Thomas Richard Connor, Samuel M Nicholls, Adam A Witney, Gregory H Tyson, Simon H Tausch, Amogelang R Raphenya, Brian Alcock, David M Aanensen, Emma B Hodcroft, William W L Hsiao, Ana Tereza Ribeiro de Vasconcelos, Duncan R MacCannell
Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package. GigaScience 11 (2022)
Nicole Pacchiarini, Clare Sawyer, Christopher Williams, Daryn Sutton, Christopher Roberts, Felicity Simkin, Grace King, Victoria McClure, Simon Cottrell, Helen Clayton, Andrew Beazer, Catie Williams, Sara M Rey, Thomas Richard Connor, Catherine Moore
Epidemiological analysis of the first 1000 cases of SARS-CoV-2 lineage BA.1 (B.1.1.529, Omicron) compared with co-circulating Delta in Wales, UK. Influenza and other respiratory viruses 16 (6) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
James P Adamson, Christopher Smith, Nicole Pacchiarini, Thomas Richard Connor, Janet Wallsgrove, Ian Coles, Clare Frost, Angharad Edwards, Jaisi Sinha, Catherine Moore, Steph Perrett, Christie Craddock, Clare Sawyer, Alison Waldram, Alicia Barrasa, Daniel Rhys Thomas, Philip Daniels, Heather Lewis
A large outbreak of COVID-19 in a UK prison, October 2020 to April 2021. Epidemiology and infection 150 (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
John T McCrone, Verity Hill, Sumali Bajaj, Rosario Evans Pena, Ben C Lambert, Rhys P D Inward, Samir Bhatt, Erik M Volz, Christopher Ruis, Simon Dellicour, Guy Baele, Alexander E Zarebski, Adam Sadilek, Neo Wu, Aaron Schneider, Xiang Ji, Jayna Raghwani, Benjamin C Jackson, Rachel Colquhoun, Áine O'Toole, Thomas P Peacock, Kate Twohig, Simon Thelwall, Gavin Dabrera, Richard Myers, null null, Nuno Rodrigues Faria, Carmen Huber, Isaac I Bogoch, Kamran Khan, Louis du Plessis, Jeffrey C Barrett, David M Aanensen, Wendy S Barclay, Meera Chand, Thomas Richard Connor, Nicholas J Loman, Marc A Suchard, Oliver George Pybus, Andrew Rambaut, Moritz U G Kraemer
Context-specific emergence and growth of the SARS-CoV-2 Delta variant. Nature 610 (7930) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Verity Hill, Louis Du Plessis, Thomas P Peacock, Dinesh Aggarwal, Rachel Colquhoun, Alessandro M Carabelli, Nicholas Ellaby, Eileen Gallagher, Natalie Groves, Benjamin C Jackson, John T McCrone, Áine Niamh O'Toole, Anna Price, Theo Sanderson, Emily Scher, Joel Southgate, Erik M Volz, Wendy S Barclay, Jeffrey C Barrett, Meera Chand, Thomas Richard Connor, Ian Goodfellow, Ravindra K Gupta, Ewan M Harrison, Nicholas Loman, Richard Myers, David L Robertson, Oliver George Pybus, Andrew Rambaut
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK. Virus evolution 8 (2) (2022)
Louis du Plessis, John T McCrone, Alexander Eugene Zarebski, Verity Hill, Christopher Ruis, Bernardo Gutierrez, Jayna Ragwani, Jordan Ashworth, Rachel Colquhoun, Thomas Richard Connor, Nuno Rodrigues Faria, Benjamin C Jackson, Nicholas James Loman, Áine Niamh O'Toole, Samuel M Nicholls, Kris Varun Parag, Emily Scher, Tetyana I Vasylyeva, Erik M Volz, Alexander G Watts, Isaac I Bogoch, Kamran Khan, null null, David M Aanensen, Moritz U G Kraemer, Andrew Rambaut, Oliver George Pybus
Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK. Science (New York, N.Y.) 371 (6530) (2021)
Samuel M Nicholls, Radoslaw Poplawski, Matthew J Bull, Anthony Underwood, Michael Chapman, Khalil Abu-Dahab, Ben Taylor, Rachel M Colquhoun, Will P M Rowe, Ben Jackson, Verity Hill, Áine O'Toole, Sara Rey, Joel Southgate, Roberto Amato, Rich Livett, Sónia Gonçalves, Ewan M Harrison, Sharon J Peacock, David M Aanensen, Andrew Rambaut, Thomas Richard Connor, Nicholas J Loman, null null
CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance. Genome biology 22 (1) (2021)
John T McCrone, Verity Hill, Sumali Bajaj, Rosario Evans Pena, Ben C Lambert, Rhys Inward, Samir Bhatt, Erik M Volz, Christopher Ruis, Simon Dellicour, Guy Baele, Alexander E Zarebski, Adam Sadilek, Neo Wu, Aaron Schneider, Xiang Ji, Jayna Raghwani, Benjamin C Jackson, Rachel Colquhoun, Áine O'Toole, Thomas P Peacock, Kate Twohig, Simon Thelwall, Gavin Dabrera, Richard Myers, null null, Nuno R Faria, Carmen Huber, Isaac I Bogoch, Kamran Khan, Louis du Plessis, Jeffrey C Barrett, David M Aanensen, Wendy S Barclay, Meera Chand, Thomas Richard Connor, Nicholas J Loman, Marc A Suchard, Oliver George Pybus, Andrew Rambaut, Moritz U G Kraemer
Context-specific emergence and growth of the SARS-CoV-2 Delta variant. Research square (2021)
Katrina A Lythgoe, Matthew D Hall, Luca Ferretti, Mariateresa de Cesare, George MacIntyre-Cockett, Amy Trebes, Monique I Andersson, Newton Otecko, Emma Louise Wise, Nathan A Moore, Jessica Lynch, Stephen P Kidd, Nicholas Cortes, Matilde Mori, Rebecca Williams, Gabrielle Vernet, Anita Justice, Angie Green, Samuel M Nicholls, M Azim Ansari, Lucie Abeler-Dörner, Catrin E Moore, Timothy E A Peto, David W Eyre, Robert Shaw, Peter Simmonds, David Buck, John A Todd, null null, Thomas Richard Connor, Shirin Ashraf, Ana da Silva Filipe, James G Shepherd, Emma C Thomson, null null, David G Bonsall, Christophe Fraser, Tanya Golubchik
SARS-CoV-2 within-host diversity and transmission. Science (New York, N.Y.) 372 (6539) (2021)
Alex J Mullins, Cerith Jones, Matthew J Bull, Gordon Webster, Julian Parkhill, Thomas Richard Connor, James A H Murray, Gregory L Challis, Eshwar Mahenthiralingam
Genomic Assemblies of Members of Burkholderia and Related Genera as a Resource for Natural Product Discovery. Microbiology resource announcements 9 (42) (2020)
Edward Cunningham-Oakes, Tom Pointon, Barry Murphy, Thomas Richard Connor, Eshwar Mahenthiralingam
Genome Sequence of Pluralibacter gergoviae ECO77, a Multireplicon Isolate of Industrial Origin. Microbiology resource announcements 9 (9) (2020)
Gordon Webster, Alex J Mullins, Aimee S Bettridge, Cerith Jones, Edward Cunningham-Oakes, Thomas Richard Connor, Julian Parkhill, Eshwar Mahenthiralingam
The Genome Sequences of Three Paraburkholderia sp. Strains Isolated from Wood-Decay Fungi Reveal Them as Novel Species with Antimicrobial Biosynthetic Potential. Microbiology resource announcements 8 (34) (2019)
Alex J Mullins, James A H Murray, Matthew J Bull, Matthew Jenner, Cerith Jones, Gordon Webster, Angharad E Green, Daniel R Neill, Thomas Richard Connor, Julian Parkhill, Gregory L Challis, Eshwar Mahenthiralingam
Genome mining identifies cepacin as a plant-protective metabolite of the biopesticidal bacterium Burkholderia ambifaria. Nature microbiology 4 (6) (2019)
Cristina Rius, Meriem Attaf, Katie Tungatt, Valentina Bianchi, Mateusz Legut, Amandine Bovay, Marco Donia, Per Thor Straten, Mark Peakman, Inge Marie Svane, Sascha Ott, Thomas Richard Connor, Barbara Szomolay, Garry Dolton, Andrew K Sewell
Peptide-MHC Class I Tetramers Can Fail To Detect Relevant Functional T Cell Clonotypes and Underestimate Antigen-Reactive T Cell Populations. Journal of immunology (Baltimore, Md. : 1950) 200 (7) (2018)
Thomas Richard Connor, Clare R Barker, Kate S Baker, François-Xavier Weill, Kaisar Ali Talukder, Anthony M Smith, Stephen Baker, Malika Gouali, Duy Pham Thanh, Ishrat Jahan Azmi, Wanderley Dias da Silveira, Torsten Semmler, Lothar H Wieler, Claire Jenkins, Alejandro Cravioto, Shah M Faruque, Julian Parkhill, Dong Wook Kim, Karen H Keddy, Nicholas R Thomson
Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri. eLife 4 (2015)

Thomas Richard Connor.css-eqlu8i{font-size:small;padding-left:4px;} (Tom Connor, Thomas Connor, Thomas R Connor)

Publication Activity (10 Years)

Top Topics

Top Venues

Thomas Richard Connor (Tom Connor, Thomas Connor, Thomas R Connor)