Ioannis S Vlachos (Ioannis Vlachos)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 20

Top Topics

Venous Thromboembolism

Systematic Review

Multiple Myeloma

Genome Wide Association

Top Venues

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Prashanth Thevkar Nagesh, Yeonhee Cho, Yuan Zhuang, Mrigya Babuta, Marti Ortega-Ribera, Radhika Joshi, Veronika Lelakova, Arman Patel, Aditi Ashish Datta, Viliam Brezani, Yun-Cheng Hsieh, Adriana Ramos, Jeeval Mehta, Christopher J Copeland, Eleni Kanata, Zhenghui Gordon Jiang, Ioannis S Vlachos, John M Asara, null null, Gyongyi Szabo
In vivo Bruton's tyrosine kinase inhibition attenuates alcohol-associated liver disease by regulating CD84-mediated granulopoiesis. Science translational medicine 16 (759) (2024)
Barbara D Lam, Pavlina Chrysafi, Thita Chiasakul, Harshit Khosla, Dimitra Karagkouni, Megan McNichol, Alys Adamski, Nimia Reyes, Karon Abe, Simon Mantha, Ioannis S Vlachos, Jeffrey I Zwicker, Rushad Patell
Machine learning natural language processing for identifying venous thromboembolism: Systematic review and meta-analysis. Blood advances (2024)
Barbara D Lam, Pavlina Chrysafi, Thita Chiasakul, Harshit Khosla, Dimitra Karagkouni, Megan McNichol, Alys Adamski, Nimia Reyes, Karon Abe, Simon Mantha, Ioannis S Vlachos, Jeffrey I Zwicker, Rushad Patell
Machine learning natural language processing for identifying venous thromboembolism: systematic review and meta-analysis. Blood advances 8 (12) (2024)
Barbara D Lam, Pavlina Chrysafi, Thita Chiasakul, Harshit Khosla, Dimitra Karagkouni, Megan McNichol, Alys Adamski, Nimia Reyes, Karon Abe, Simon Mantha, Ioannis S Vlachos, Jeffrey I Zwicker, Rushad Patell
Machine learning natural language processing for identifying venous thromboembolism: systematic review and meta-analysis. Blood advances 8 (12) (2024)
Zoe Veneti, Virginia Fasoulaki, Nikolas I Kalavros, Ioannis S Vlachos, Christos Delidakis, Aristides G Eliopoulos
Polycomb-mediated silencing of miR-8 is required for maintenance of intestinal stemness in Drosophila melanogaster. Nature communications 15 (1) (2024)
Zoe Veneti, Virginia Fasoulaki, Nikolas I Kalavros, Ioannis S Vlachos, Christos Delidakis, Aristides G Eliopoulos
Polycomb-mediated silencing of miR-8 is required for maintenance of intestinal stemness in Drosophila melanogaster. Nature communications 15 (1) (2024)
Christos Miliotis, Yuling Ma, Xanthi-Lida Katopodi, Dimitra Karagkouni, Eleni Kanata, Kaia Mattioli, Nikolas I Kalavros, Yered H Pita-Juárez, Felipe Batalini, Varune R Ramnarine, Shivani Nanda, Frank J Slack, Ioannis S Vlachos
Determinants of gastric cancer immune escape identified from non-coding immune-landscape quantitative trait loci. Nature communications 15 (1) (2024)
Christos Miliotis, Yuling Ma, Xanthi-Lida Katopodi, Dimitra Karagkouni, Eleni Kanata, Kaia Mattioli, Nikolas I Kalavros, Yered H Pita-Juárez, Felipe Batalini, Varune R Ramnarine, Shivani Nanda, Frank J Slack, Ioannis S Vlachos
Determinants of gastric cancer immune escape identified from non-coding immune-landscape quantitative trait loci. Nature communications 15 (1) (2024)
Barbara D Lam, Pavlina Chrysafi, Thita Chiasakul, Harshit Khosla, Dimitra Karagkouni, Megan McNichol, Alys Adamski, Nimia Reyes, Karon Abe, Simon Mantha, Ioannis S Vlachos, Jeffrey I Zwicker, Rushad Patell
Machine learning natural language processing for identifying venous thromboembolism: systematic review and meta-analysis. Blood advances 8 (12) (2024)
Christos Miliotis, Yuling Ma, Xanthi-Lida Katopodi, Dimitra Karagkouni, Eleni Kanata, Kaia Mattioli, Nikolas I Kalavros, Yered H Pita-Juárez, Felipe Batalini, Varune R Ramnarine, Shivani Nanda, Frank J Slack, Ioannis S Vlachos
Determinants of gastric cancer immune escape identified from non-coding immune-landscape quantitative trait loci. Nature communications 15 (1) (2024)
Zoe Veneti, Virginia Fasoulaki, Nikolas I Kalavros, Ioannis S Vlachos, Christos Delidakis, Aristides G Eliopoulos
Polycomb-mediated silencing of miR-8 is required for maintenance of intestinal stemness in Drosophila melanogaster. Nature communications 15 (1) (2024)
Barbara D Lam, Pavlina Chrysafi, Thita Chiasakul, Harshit Khosla, Dimitra Karagkouni, Megan McNichol, Alys Adamski, Nimia Reyes, Karon Abe, Simon Mantha, Ioannis S Vlachos, Jeffrey I Zwicker, Rushad Patell
Machine learning natural language processing for identifying venous thromboembolism: systematic review and meta-analysis. Blood advances 8 (12) (2024)
David J Chung, Nina Shah, Juan Wu, Brent R Logan, Lina Bisharat, Natalie S Callander, Giulia Cheloni, Kenneth C Anderson, Thinle Chodon, Binod Dhakal, Steven M Devine, Poorvi Somaiya Dutt, Yvonne A Efebera, Nancy L Geller, Haider Ghiasuddin, Peiman Hematti, Leona Holmberg, Alan Howard, Bryon Johnson, Dimitra Karagkouni, Hillard M Lazarus, Ehsan Malek, Philip L McCarthy, David H McKenna, Adam Mendizabal, Ajay K Nooka, Nikhil C Munshi, Lynn O'Donnell, Aaron P Rapoport, Jane Reese, Jacalyn Rosenblatt, Robert J Soiffer, Dina Stroopinsky, Lynne Uhl, Ioannis S Vlachos, Edmund K Waller, James W Young, Marcelo C Pasquini, David Avigan
Randomized Trial of a Personalized Dendritic Cell Vaccine after Autologous Stem Cell Transplant for Multiple Myeloma. Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Ellen M Quardokus, Diane C Saunders, Elizabeth McDonough, John W Hickey, Christopher Werlein, Christine Surrette, Presha Rajbhandari, Anna Martinez Casals, Hua Tian, Lisa Lowery, Elizabeth K Neumann, Frida Björklund, Taruna V Neelakantan, Joshua Croteau, Anne E Wiblin, Jeremy Fisher, April J Livengood, Karen G Dowell, Jonathan C Silverstein, Jeffrey M Spraggins, Gloria S Pryhuber, Gail Deutsch, Fiona Ginty, Garry P Nolan, Simon Melov, Danny D Jonigk, Michael A Caldwell, Ioannis S Vlachos, Werner Muller, Nils Gehlenborg, Brent R Stockwell, Emma Lundberg, Michael Paul Snyder, Ronald N Germain, Jeannie M Camarillo, Michael P Snyder, Katy Börner, Andrea J Radtke
Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging. Nature methods (2023)
Giorgos Skoufos, Fatemeh Almodaresi, Mohsen Zakeri, Joseph N Paulson, Rob Patro, Artemis G Hatzigeorgiou, Ioannis S Vlachos
AGAMEMNON: an Accurate metaGenomics And MEtatranscriptoMics quaNtificatiON analysis suite. Genome biology 23 (1) (2022)
Yered H Pita-Juárez, Dimitra Karagkouni, Nikolaos Kalavros, Johannes C Melms, Sebastian Niezen, Toni M Delorey, Adam L Essene, Olga R Brook, Deepti Pant, Disha Skelton-Badlani, Pourya Naderi Yeganeh, Pinzhu Huang, Liuliu Pan, Tyler Hether, Tallulah S Andrews, Carly G K Ziegler, Jason Reeves, Andriy Myloserdnyy, Rachel Chen, Andy Nam, Stefan Phelan, Yan Liang, Amit Dipak Amin, Jana Biermann, Hanina Hibshoosh, Molly Veregge, Zachary Kramer, Christopher Jacobs, Yusuf Yalcin, Devan Phillips, Michal Slyper, Ayshwarya Subramanian, Orr Ashenberg, Zohar Bloom-Ackermann, Victoria M Tran, James Gomez, Alexander Sturm, Shuting Zhang, Stephen J Fleming, Sarah Warren, Joseph Beechem, Deborah Hung, Mehrtash Babadi, Robert F Padera, Sonya A MacParland, Gary D Bader, Nasser Imad, Isaac H Solomon, Eric Miller, Stefan Riedel, Caroline B M Porter, Alexandra-Chloé Villani, Linus T-Y Tsai, Winston A Hide, Gyongyi Szabo, Jonathan Hecht, Orit Rozenblatt-Rosen, Alex K Shalek, Benjamin Izar, Aviv Regev, Yury V Popov, Z Gordon Jiang, Ioannis S Vlachos
A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients. bioRxiv : the preprint server for biology (2022)
Despoina Kalfakakou, Florentia Fostira, Athanasios Papathanasiou, Paraskevi Apostolou, Vasiliki Dellatola, Ioanna E Gavra, Ioannis S Vlachos, Zacharias G Scouras, Eleni Drosopoulou, Drakoulis Yannoukakos, Irene Konstantopoulou
CanVaS: Documenting the genetic variation spectrum of Greek cancer patients. Human mutation 42 (9) (2021)
Toni Marie Delorey, Carly G K Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe, Domenic Abbondanza, Stephen J Fleming, Ayshwarya Subramanian, Daniel T Montoro, Karthik A Jagadeesh, Kushal K Dey, Pritha Sen, Michal Slyper, Yered H Pita-Juárez, Devan Phillips, Jana Biermann, Zohar Bloom-Ackermann, Nikolaos Barkas, Andrea Ganna, James Gomez, Johannes C Melms, Igor Katsyv, Erica Normandin, Pourya Naderi, Yury V Popov, Siddharth S Raju, Sebastian Niezen, Linus T-Y Tsai, Katherine J Siddle, Malika Sud, Victoria M Tran, Shamsudheen K Vellarikkal, Yiping Wang, Liat Amir-Zilberstein, Deepak S Atri, Joseph Beechem, Olga R Brook, Jonathan Chen, Prajan Divakar, Phylicia Dorceus, Jesse M Engreitz, Adam Essene, Donna M Fitzgerald, Robin Fropf, Steven Gazal, Joshua Gould, John Grzyb, Tyler Harvey, Jonathan Hecht, Tyler Hether, Judit Jané-Valbuena, Michael Leney-Greene, Hui Ma, Cristin McCabe, Daniel E McLoughlin, Eric M Miller, Christoph Muus, Mari Niemi, Robert Padera, Liuliu Pan, Deepti Pant, Carmel Pe'er, Jenna Pfiffner-Borges, Christopher J Pinto, Jacob Plaisted, Jason Reeves, Marty Ross, Melissa Rudy, Erroll H Rueckert, Michelle Siciliano, Alexander Sturm, Ellen Todres, Avinash Waghray, Sarah Warren, Shuting Zhang, Daniel R Zollinger, Lisa Cosimi, Rajat M Gupta, Nir Hacohen, Hanina Hibshoosh, Winston Hide, Alkes L Price, Jayaraj Rajagopal, Purushothama Rao Tata, Stefan Riedel, Gyongyi Szabo, Timothy L Tickle, Patrick T Ellinor, Deborah Hung, Pardis C Sabeti, Richard Novak, Robert Rogers, Donald E Ingber, Z Gordon Jiang, Dejan Juric, Mehrtash Babadi, Samouil L Farhi, Benjamin Izar, James R Stone, Ioannis S Vlachos, Isaac H Solomon, Orr Ashenberg, Caroline B M Porter, Bo Li, Alex K Shalek, Alexandra-Chloé Villani, Orit Rozenblatt-Rosen, Aviv Regev
COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets. Nature 595 (7865) (2021)
Joanna E Handzlik, Spyros Tastsoglou, Ioannis S Vlachos, Artemis G Hatzigeorgiou
Manatee: detection and quantification of small non-coding RNAs from next-generation sequencing data. Scientific reports 10 (1) (2020)
Maria D Paraskevopoulou, Dimitra Karagkouni, Ioannis S Vlachos, Spyros Tastsoglou, Artemis G Hatzigeorgiou
microCLIP super learning framework uncovers functional transcriptome-wide miRNA interactions. Nature communications 9 (1) (2018)