Animesh Acharjee

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 48

Top Venues

BMC medical informatics and decision making

Journal of translational medicine

Cancer medicine

European heart journal

University of Cambridge

Wageningen University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Cambridge Feb 17 2014 - Jan 11 2017

United Kingdom

Investigator Scientist :: Biochemistry

Education History

Wageningen University Jul 06 2007 - Jun 11 2011

Netherlands

PHD

Publications

Samuel Cusworth, Georgios V Gkoutos, Animesh Acharjee
A novel generative adversarial networks modelling for the class imbalance problem in high dimensional omics data. BMC medical informatics and decision making 24 (1) (2024)
Anubrata Das, Georgios V Gkoutos, Animesh Acharjee
Analysis of translesion polymerases in colorectal cancer cells following cetuximab treatment: A network perspective. Cancer medicine 13 (1) (2024)
Nina M Frerichs, Nancy Deianova, Sofia El Manouni El Hassani, Animesh Acharjee, Mohammed Nabil Quraishi, Willem P de Boode, Veerle Cossey, Christian V Hulzebos, Anton H van Kaam, Boris W Kramer, Esther d'Haens, Wouter J de Jonge, Daniel C Vijbrief, Mirjam Maria van Weissenbruch, Emma Daulton, Alfian N Wicaksono, James Anthony Covington, Marc A Benninga, Nanne K H De Boer, Johannes Hans B van Goudoever, Hendrik J Niemarkt, Tim G J de Meij
Fecal microbiota and volatile metabolome pattern alterations precede late-onset meningitis in preterm neonates. The Journal of infectious diseases (2024)
Samuel Cusworth, Georgios V Gkoutos, Animesh Acharjee
A novel generative adversarial networks modelling for the class imbalance problem in high dimensional omics data. BMC medical informatics and decision making 24 (1) (2024)
Nikhil Pal, Animesh Acharjee, Zsuzsanna Ament, Tim Dent, Arash Yavari, Masliza Mahmod, Rina Ariga, James West, Violetta Steeples, Mark Cassar, Neil J Howell, Helen Lockstone, Kate Elliott, Parisa Yavari, William Briggs, Michael Frenneaux, Bernard Prendergast, Jeremy S Dwight, Rajesh Kharbanda, Hugh Watkins, Houman Ashrafian, Julian Leether Griffin
Metabolic profiling of aortic stenosis and hypertrophic cardiomyopathy identifies mechanistic contrasts in substrate utilization. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 38 (6) (2024)
Animesh Acharjee, Susanne N Wijesinghe, Dominic Russ, Georgios Gkoutos, Simon W Jones
Cross-species transcriptomics identifies obesity associated genes between human and mouse studies. Journal of translational medicine 22 (1) (2024)
Anubrata Das, Georgios V Gkoutos, Animesh Acharjee
Analysis of translesion polymerases in colorectal cancer cells following cetuximab treatment: A network perspective. Cancer medicine 13 (1) (2024)
Samuel Cusworth, Georgios V Gkoutos, Animesh Acharjee
A novel generative adversarial networks modelling for the class imbalance problem in high dimensional omics data. BMC medical informatics and decision making 24 (1) (2024)
Jessica Conway, Animesh Acharjee, Niharika A Duggal
Integrated analysis revealing novel associations between dietary patterns and the immune system in older adults. Integrative biology : quantitative biosciences from nano to macro 16 (2024)
Animesh Acharjee, Susanne N Wijesinghe, Dominic Russ, Georgios Gkoutos, Simon W Jones
Cross-species transcriptomics identifies obesity associated genes between human and mouse studies. Journal of translational medicine 22 (1) (2024)
Animesh Acharjee, Susanne N Wijesinghe, Dominic Russ, Georgios Gkoutos, Simon W Jones
Cross-species transcriptomics identifies obesity associated genes between human and mouse studies. Journal of translational medicine 22 (1) (2024)
Samuel Cusworth, Georgios V Gkoutos, Animesh Acharjee
A novel generative adversarial networks modelling for the class imbalance problem in high dimensional omics data. BMC medical informatics and decision making 24 (1) (2024)
Samuel Cusworth, Georgios V Gkoutos, Animesh Acharjee
A novel generative adversarial networks modelling for the class imbalance problem in high dimensional omics data. BMC medical informatics and decision making 24 (1) (2024)
Eva Karamitopoulou, Anna Silvia Wenning, Animesh Acharjee, Pauline Aeschbacher, Ilaria Marinoni, Inti Zlobec, Beat Gloor, Aurel Perren
Spatial heterogeneity of immune regulators drives dynamic changes of local immune responses, affecting disease outcomes in pancreatic cancer. Clinical cancer research : an official journal of the American Association for Cancer Research (2024)
Simrat K Gill, Andreas Karwath, Hae-Won Uh, Victor Roth Cardoso, Zhujie Gu, Andrey Barsky, Luke T Slater, Animesh Acharjee, Jinming Duan, Lorenzo Dall'Olio, Said El Bouhaddani, Saisakul Chernbumroong, Mary Stanbury, Sandra Haynes, Folkert W. Asselbergs, Diederick E Grobbee, Marinus J C Eijkemans, Georgios V Gkoutos, Dipak Kotecha, null null
Artificial intelligence to enhance clinical value across the spectrum of cardiovascular healthcare. European heart journal (2023)
Conor Bentley, Jon Hazeldine, Laura Bravo, Angela E Taylor, Lorna C Gilligan, Fozia Shaheen, Animesh Acharjee, George Gkoutos, Mark A Foster, Wiebeke Arlt, Janet M Lord
The ultra-acute steroid response to traumatic injury: a cohort study. European journal of endocrinology 188 (3) (2023)
Simrat K Gill, Andreas Karwath, Hae-Won Uh, Victor Roth Cardoso, Zhujie Gu, Andrey Barsky, Luke T Slater, Animesh Acharjee, Jinming Duan, Lorenzo Dall'Olio, Said El Bouhaddani, Saisakul Chernbumroong, Mary Stanbury, Sandra Haynes, Folkert W. Asselbergs, Diederick E Grobbee, Marinus J C Eijkemans, Georgios V Gkoutos, Dipak Kotecha, null null
Artificial intelligence to enhance clinical value across the spectrum of cardiovascular healthcare. European heart journal (2023)
Animesh Acharjee
Translational research and key aspects to make it successful. Translational medicine communications 8 (1) (2023)
Animesh Acharjee
Explainable AI for gut microbiome-based diagnostics: colorectal cancer as a case study. Diagnosis (Berlin, Germany) (2023)
Animesh Acharjee
Translational research and key aspects to make it successful. Translational medicine communications 8 (1) (2023)
Akshay Kaushal, Anandadeep Mandal, Diksha Khanna, Animesh Acharjee
Analysis of the opinions of individuals on the COVID-19 vaccination on social media. Digital health 9 (2023)
Simrat K Gill, Andreas Karwath, Hae-Won Uh, Victor Roth Cardoso, Zhujie Gu, Andrey Barsky, Luke T Slater, Animesh Acharjee, Jinming Duan, Lorenzo Dall'Olio, Said El Bouhaddani, Saisakul Chernbumroong, Mary Stanbury, Sandra Haynes, Folkert W. Asselbergs, Diederick E Grobbee, Marinus J C Eijkemans, Georgios V Gkoutos, Dipak Kotecha, null null
Artificial intelligence to enhance clinical value across the spectrum of cardiovascular healthcare. European heart journal 44 (9) (2023)
Conor Bentley, Jon Hazeldine, Laura Bravo, Angela E Taylor, Lorna C Gilligan, Fozia Shaheen, Animesh Acharjee, George Gkoutos, Mark A Foster, Wiebeke Arlt, Janet M Lord
The ultra-acute steroid response to traumatic injury: a cohort study. European journal of endocrinology (2023)
Animesh Acharjee, Utpreksha Singh, Saptamita Paul Choudhury, Georgios V Gkoutos
The diagnostic potential and barriers of microbiome based therapeutics. Diagnosis (Berlin, Germany) 9 (4) (2022)
Basak Bahcivanci, Roshan Shafiha, Georgios V Gkoutos, Animesh Acharjee
Associating transcriptomics data with inflammatory markers to understand tumour microenvironment in hepatocellular carcinoma. Cancer medicine (2022)
Animesh Acharjee, Saptamita Paul Choudhury
Artificial intelligence-based personalized nutrition and prediction of irritable bowel syndrome patients. Therapeutic advances in gastroenterology 15 (2022)
Saraswati Koppad, Annappa Basava, Katrina Nash, Georgios V Gkoutos, Animesh Acharjee
Machine Learning-Based Identification of Colon Cancer Candidate Diagnostics Genes. Biology 11 (3) (2022)
Hülya Yılmaz Temel, Öznur Kaymak, Seren Kaplan, Basak Bahcivanci, Georgios V Gkoutos, Animesh Acharjee
Role of microbiota and microbiota-derived short-chain fatty acids in PDAC. Cancer medicine (2022)
Marietta Iacucci, Louisa Jeffery, Animesh Acharjee, Enrico Grisan, Andrea Buda, Olga Maria Nardone, Samuel C L Smith, Nunzia Labarile, Davide Zardo, Bella Ungar, Stuart Hunter, Ren Mao, Rosanna Cannatelli, Uday N Shivaji, Tommaso Lorenzo Parigi, Gary M Reynolds, Georgios V Gkoutos, Subrata Ghosh
Computer-Aided Imaging Analysis of Probe-Based Confocal Laser Endomicroscopy With Molecular Labeling and Gene Expression Identifies Markers of Response to Biological Therapy in IBD Patients: The Endo-Omics Study. Inflammatory bowel diseases (2022)
Animesh Acharjee, Saptamita Paul Choudhury
Artificial intelligence-based personalized nutrition and prediction of irritable bowel syndrome patients. Therapeutic advances in gastroenterology 15 (2022)
Tanya M Monaghan, Niharika A Duggal, Elisa Rosati, Ruth Griffin, Jamie Hughes, Brandi Roach, David Y Yang, Christopher Wang, Karen Wong, Lynora Saxinger, Maja Pučić-Baković, Frano Vučković, Filip Kliček, Gordan Lauc, Paddy Tighe, Benjamin Harvey Mullish, Jesus Miguens Blanco, Julie Anne Kathryn McDonald, Julian R Marchesi, Ning Xue, Tania Dottorini, Animesh Acharjee, Andre Franke, Yingrui Li, Gane Ka-Shu Wong, Christos Polytarchou, Tung On Yau, Niki Christodoulou, Maria Hatziapostolou, Minkun Wang, Lindsey A Russell, Dina H Kao
A Multi-Factorial Observational Study on Sequential Fecal Microbiota Transplant in Patients with Medically Refractory Clostridioides difficile Infection. Cells 10 (11) (2021)
Animesh Acharjee, Jon Hazeldine, Alina Bazarova, Lavanya Deenadayalu, Jinkang Zhang, Conor Bentley, Dominic Russ, Janet M Lord, Georgios V Gkoutos, Stephen P Young, Mark A Foster
Integration of Metabolomic and Clinical Data Improves the Prediction of Intensive Care Unit Length of Stay Following Major Traumatic Injury. Metabolites 12 (1) (2021)
Pedro Mena, Claudia Favari, Animesh Acharjee, Saisakul Chernbumroong, Letizia Bresciani, Claudio Curti, Furio Brighenti, Christian Heiss, Ana Rodriguez-Mateos, Daniele Del Rio
Metabotypes of flavan-3-ol colonic metabolites after cranberry intake: elucidation and statistical approaches. European journal of nutrition (2021)
John A Williams, Dominic Russ, Laura Bravo-Merodio, Victor Roth Cardoso, Samantha C Pendleton, Furqan Aziz, Animesh Acharjee, Georgios V Gkoutos
A Causal Web between Chronotype and Metabolic Health Traits. Genes 12 (7) (2021)
Jon Hazeldine, Robert J Dinsdale, David N Naumann, Animesh Acharjee, Jonathan R B Bishop, Janet M Lord, Paul Harrison
Traumatic injury is associated with reduced deoxyribonuclease activity and dysregulation of the actin scavenging system. Burns & trauma 9 (2021)
Hannah Wood, Animesh Acharjee, Hayden Pearce, Mohammed Nabil Quraishi, Richard Powell, Amanda Rossiter, Andrew Beggs, Andrew Ewer, Paul Moss, Gergely Toldi
Breastfeeding promotes early neonatal regulatory T-cell expansion and immune tolerance of non-inherited maternal antigens. Allergy 76 (8) (2021)
Saraswati Koppad, Annappa B, Georgios V Gkoutos, Animesh Acharjee
Cloud Computing Enabled Big Multi-Omics Data Analytics. Bioinformatics and biology insights 15 (2021)
Roshan Shafiha, Basak Bahcivanci, Georgios V Gkoutos, Animesh Acharjee
Machine Learning-Based Identification of Potentially Novel Non-Alcoholic Fatty Liver Disease Biomarkers. Biomedicines 9 (11) (2021)
Tanya M Monaghan, Rima N Biswas, Rupam R Nashine, Samidha S Joshi, Benjamin Harvey Mullish, Anna M Seekatz, Jesus Miguens Blanco, Julie A K McDonald, Julian R Marchesi, Tung On Yau, Niki Christodoulou, Maria Hatziapostolou, Maja Pucic-Bakovic, Frano Vuckovic, Filip Kliček, Gordan Lauc, Ning Xue, Tania Dottorini, Shrikant Ambalkar, Ashish Rambhau Satav, Christos Polytarchou, Animesh Acharjee, Rajpal Singh Kashyap
Multiomics Profiling Reveals Signatures of Dysmetabolism in Urban Populations in Central India. Microorganisms 9 (7) (2021)
Hassan Sadozai, Animesh Acharjee, Thomas Gruber, Beat Gloor, Eva Karamitopoulou
Pancreatic Cancers with High Grade Tumor Budding Exhibit Hallmarks of Diminished Anti-Tumor Immunity. Cancers 13 (5) (2021)
Marietta Iacucci, Louisa Jeffery, Animesh Acharjee, Olga Maria Nardone, Davide Zardo, Samuel C L Smith, Alina Bazarova, Rosanna Cannatelli, Uday N Shivaji, John Williams, Georgios Gkoutos, Subrata Ghosh
Ultra-high Magnification Endocytoscopy and Molecular Markers for Defining Endoscopic and Histologic Remission in Ulcerative Colitis-An Exploratory Study to Define Deep Remission. Inflammatory bowel diseases 27 (11) (2021)
Vartika Bisht, Katrina Nash, Yuanwei Xu, Prasoon Agarwal, Sofie Bosch, Georgios V Gkoutos, Animesh Acharjee
Integration of the Microbiome, Metabolome and Transcriptomics Data Identified Novel Metabolic Pathway Regulation in Colorectal Cancer. International journal of molecular sciences 22 (11) (2021)
Zsuzsanna Ament, Matthew B Bevers, Zoe Wolcott, William T Kimberly, Animesh Acharjee
Uric Acid and Gluconic Acid as Predictors of Hyperglycemia and Cytotoxic Injury after Stroke. Translational stroke research 12 (2) (2020)
Veronica Lolli, Animesh Acharjee, Donato Angelino, Michele Tassotti, Daniele Del Rio, Pedro Mena, Augusta Caligiani
Chemical Characterization of Capsule-Brewed Espresso Coffee Aroma from the Most Widespread Italian Brands by HS-SPME/GC-MS. Molecules (Basel, Switzerland) 25 (5) (2020)
Animesh Acharjee, Joseph Larkman, Yuanwei Xu, Victor Roth Cardoso, Georgios V Gkoutos
A random forest based biomarker discovery and power analysis framework for diagnostics research. BMC medical genomics 13 (1) (2020)
Laura Bravo-Merodio, John A Williams, Georgios V Gkoutos, Animesh Acharjee
-Omics biomarker identification pipeline for translational medicine. Journal of translational medicine 17 (1) (2019)
Laura Bravo-Merodio, Animesh Acharjee, Jon Hazeldine, Conor Bentley, Mark Foster, Georgios V Gkoutos, Janet M Lord
Machine learning for the detection of early immunological markers as predictors of multi-organ dysfunction. Scientific data 6 (1) (2019)
Pedro Mena, Iziar A Ludwig, Virginia B Tomatis, Animesh Acharjee, Luca Calani, Alice Rosi, Furio Brighenti, Sumantra Ray, Julian Leether Griffin, Les J Bluck, Daniele Del Rio
Inter-individual variability in the production of flavan-3-ol colonic metabolites: preliminary elucidation of urinary metabotypes. European journal of nutrition 58 (4) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Animesh Acharjee