Joaquín Dopazo (Joaquin Dopazo)

Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 58

Top Venues

International journal of molecular sciences

Genes

Pharmaceutics

Communications biology

This page only lists publications with an associated author ORCID identifier.

Publications

Carlos S Casimiro-Soriguer, Javier Perez-Florido, Maria Lara, Pedro Camacho-Martinez, Laura Merino-Diaz, Inmaculada Pupo-Ledo, Adolfo de Salazar, Ana Fuentes, Laura Viñuela, Natalia Chueca, Luis Martinez-Martinez, Nicola Lorusso, Jose A Lepe, Joaquín Dopazo, Federico Garcia
Molecular and phylogenetic characterization of the monkeypox outbreak in the South of Spain. Health science reports 7 (3) (2024)
Marina Esteban-Medina, Carlos Loucera, Kinza Rian, Sheyla Velasco, Lorena Olivares-González, Regina Rodrigo, Joaquín Dopazo, Maria Peña-Chilet
The mechanistic functional landscape of retinitis pigmentosa: a machine learning-driven approach to therapeutic target discovery. Journal of translational medicine 22 (1) (2024)
Alberto Maillo, Estefania Huergo, María Apellániz-Ruiz, Edurne Urrutia-Lafuente, María Miranda, Josefa Salgado, Sara Pasalodos-Sanchez, Luna Delgado-Mora, Óscar Teijido, Ibai Goicoechea, Rosario Carmona, Javier Perez-Florido, Virginia Aquino, Daniel López-López, María Peña-Chilet, Sergi Beltran, Joaquín Dopazo, Iñigo Lasa, Juan José Beloqui, null Nagen-Scheme, Ángel Alonso, David-Gómez Cabrero
Characterization of the Common Genetic Variation in the Spanish Population of Navarre. Genes 15 (5) (2024)
Alberto Maillo, Estefania Huergo, María Apellániz-Ruiz, Edurne Urrutia-Lafuente, María Miranda, Josefa Salgado, Sara Pasalodos-Sanchez, Luna Delgado-Mora, Óscar Teijido, Ibai Goicoechea, Rosario Carmona, Javier Perez-Florido, Virginia Aquino, Daniel López-López, María Peña-Chilet, Sergi Beltran, Joaquín Dopazo, Iñigo Lasa, Juan José Beloqui, null Nagen-Scheme, Ángel Alonso, David-Gómez Cabrero
Characterization of the Common Genetic Variation in the Spanish Population of Navarre. Genes 15 (5) (2024)
Marina Esteban-Medina, Carlos Loucera, Kinza Rian, Sheyla Velasco, Lorena Olivares-González, Regina Rodrigo, Joaquín Dopazo, Maria Peña-Chilet
The mechanistic functional landscape of retinitis pigmentosa: a machine learning-driven approach to therapeutic target discovery. Journal of translational medicine 22 (1) (2024)
Carlos S Casimiro-Soriguer, Javier Perez-Florido, Maria Lara, Pedro Camacho-Martinez, Laura Merino-Diaz, Inmaculada Pupo-Ledo, Adolfo de Salazar, Ana Fuentes, Laura Viñuela, Natalia Chueca, Luis Martinez-Martinez, Nicola Lorusso, Jose A Lepe, Joaquín Dopazo, Federico Garcia
Molecular and phylogenetic characterization of the monkeypox outbreak in the South of Spain. Health science reports 7 (3) (2024)
Marina Esteban-Medina, Carlos Loucera, Kinza Rian, Sheyla Velasco, Lorena Olivares-González, Regina Rodrigo, Joaquín Dopazo, Maria Peña-Chilet
The mechanistic functional landscape of retinitis pigmentosa: a machine learning-driven approach to therapeutic target discovery. Journal of translational medicine 22 (1) (2024)
Marina Esteban-Medina, Carlos Loucera, Kinza Rian, Sheyla Velasco, Lorena Olivares-González, Regina Rodrigo, Joaquín Dopazo, Maria Peña-Chilet
The mechanistic functional landscape of retinitis pigmentosa: a machine learning-driven approach to therapeutic target discovery. Journal of translational medicine 22 (1) (2024)
Alberto Maillo, Estefania Huergo, María Apellániz-Ruiz, Edurne Urrutia-Lafuente, María Miranda, Josefa Salgado, Sara Pasalodos-Sanchez, Luna Delgado-Mora, Óscar Teijido, Ibai Goicoechea, Rosario Carmona, Javier Perez-Florido, Virginia Aquino, Daniel López-López, María Peña-Chilet, Sergi Beltran, Joaquín Dopazo, Iñigo Lasa, Juan José Beloqui, null Nagen-Scheme, Ángel Alonso, David-Gómez Cabrero
Characterization of the Common Genetic Variation in the Spanish Population of Navarre. Genes 15 (5) (2024)
Carlos Loucera, Rosario Carmona, Marina Esteban-Medina, Gerrit Bostelmann, Dolores Muñoyerro-Muñiz, Román Villegas-Portero, Maria Peña-Chilet, Joaquín Dopazo
Real-world evidence with a retrospective cohort of 15,968 COVID-19 hospitalized patients suggests 21 new effective treatments. Virology journal 20 (1) (2023)
Rocio Nunez-Torres, Guillermo Pita, María Peña-Chilet, Daniel López-López, Jorge Zamora, Gema Roldán, Belén Herráez, Nuria Álvarez, María Rosario Alonso, Joaquín Dopazo, Anna González-Neira
A Comprehensive Analysis of 21 Actionable Pharmacogenes in the Spanish Population: From Genetic Characterisation to Clinical Impact. Pharmaceutics 15 (4) (2023)
Pelin Gundogdu, Inmaculada Álamo-Álvarez, Isabel A Nepomuceno-Chamorro, Joaquín Dopazo, Carlos Loucera
SigPrimedNet: A Signaling-Informed Neural Network for scRNA-seq Annotation of Known and Unknown Cell Types. Biology 12 (4) (2023)
Rocio Nunez-Torres, Guillermo Pita, María Peña-Chilet, Daniel López-López, Jorge Zamora, Gema Roldán, Belén Herráez, Nuria Álvarez, María Rosario Alonso, Joaquín Dopazo, Anna González-Neira
A Comprehensive Analysis of 21 Actionable Pharmacogenes in the Spanish Population: From Genetic Characterisation to Clinical Impact. Pharmaceutics 15 (4) (2023)
Cankut Çubuk, Carlos Loucera, Maria Peña-Chilet, Joaquín Dopazo
Crosstalk between Metabolite Production and Signaling Activity in Breast Cancer. International journal of molecular sciences 24 (8) (2023)
Miriam Payá-Milans, María Peña-Chilet, Carlos Loucera, Marina Esteban-Medina, Joaquín Dopazo
Functional Profiling of Soft Tissue Sarcoma Using Mechanistic Models. International journal of molecular sciences 24 (19) (2023)
Javier Perez-Florido, Carlos S Casimiro-Soriguer, Francisco Ortuño, Jose L Fernandez-Rueda, Andrea Aguado, María Lara, Cristina Riazzo, Manuel Antonio Rodríguez-Iglesias, Pedro Camacho-Martínez, Laura Merino-Diaz, Inmaculada Pupo-Ledo, Adolfo de Salazar, Laura Viñuela, Ana Fuentes, Natalia Chueca, null The Andalusian Covid-Sequencing Initiative, Federico Garcia, Joaquín Dopazo, José Antonio Lepe
Detection of High Level of Co-Infection and the Emergence of Novel SARS CoV-2 Delta-Omicron and Omicron-Omicron Recombinants in the Epidemiological Surveillance of Andalusia. International journal of molecular sciences 24 (3) (2023)
Rocio Nunez-Torres, Guillermo Pita, María Peña-Chilet, Daniel López-López, Jorge Zamora, Gema Roldán, Belén Herráez, Nuria Álvarez, María Rosario Alonso, Joaquín Dopazo, Anna González-Neira
A Comprehensive Analysis of 21 Actionable Pharmacogenes in the Spanish Population: From Genetic Characterisation to Clinical Impact. Pharmaceutics 15 (4) (2023)
Rocio Nunez-Torres, Guillermo Pita, María Peña-Chilet, Daniel López-López, Jorge Zamora, Gema Roldán, Belén Herráez, Nuria Álvarez, María Rosario Alonso, Joaquín Dopazo, Anna González-Neira
A Comprehensive Analysis of 21 Actionable Pharmacogenes in the Spanish Population: From Genetic Characterisation to Clinical Impact. Pharmaceutics 15 (4) (2023)
Javier Perez-Florido, Carlos S Casimiro-Soriguer, Francisco Ortuño, Jose L Fernandez-Rueda, Andrea Aguado, María Lara, Cristina Riazzo, Manuel Antonio Rodríguez-Iglesias, Pedro Camacho-Martínez, Laura Merino-Diaz, Inmaculada Pupo-Ledo, Adolfo de Salazar, Laura Viñuela, Ana Fuentes, Natalia Chueca, null The Andalusian Covid-Sequencing Initiative, Federico Garcia, Joaquín Dopazo, José Antonio Lepe
Detection of High Level of Co-Infection and the Emergence of Novel SARS CoV-2 Delta-Omicron and Omicron-Omicron Recombinants in the Epidemiological Surveillance of Andalusia. International journal of molecular sciences 24 (3) (2023)
Javier Perez-Florido, Carlos S Casimiro-Soriguer, Francisco Ortuño, Jose L Fernandez-Rueda, Andrea Aguado, María Lara, Cristina Riazzo, Manuel Antonio Rodríguez-Iglesias, Pedro Camacho-Martínez, Laura Merino-Diaz, Inmaculada Pupo-Ledo, Adolfo de Salazar, Laura Viñuela, Ana Fuentes, Natalia Chueca, null The Andalusian Covid-Sequencing Initiative, Federico Garcia, Joaquín Dopazo, José Antonio Lepe
Detection of High Level of Co-Infection and the Emergence of Novel SARS CoV-2 Delta-Omicron and Omicron-Omicron Recombinants in the Epidemiological Surveillance of Andalusia. International journal of molecular sciences 24 (3) (2023)
Alejandro Sola-García, María Ángeles Cáliz-Molina, Isabel Espadas, Michael Petr, Concepción Panadero-Morón, Daniel González-Morán, María Eugenia Martín-Vázquez, Álvaro Jesús Narbona-Pérez, Livia López-Noriega, Guillermo Martínez Corrales, Raúl López-Fernández-Sobrino, Lina M Carmona-Marin, Enrique Martínez-Force, Óscar Yanes, Maria Vinaixa, Daniel López-López, José Carlos Reyes, Joaquín Dopazo, Franz Martín, Benoit R Gauthier, Morten Scheibye-Knudsen, Vivian Capilla-González, Alejandro Martín-Montalvo
Metabolic reprogramming by Acly inhibition using SB-204990 alters glucoregulation and modulates molecular mechanisms associated with aging. Communications biology 6 (1) (2023)
Alejandro Sola-García, María Ángeles Cáliz-Molina, Isabel Espadas, Michael Petr, Concepción Panadero-Morón, Daniel González-Morán, María Eugenia Martín-Vázquez, Álvaro Jesús Narbona-Pérez, Livia López-Noriega, Guillermo Martínez Corrales, Raúl López-Fernández-Sobrino, Lina M Carmona-Marin, Enrique Martínez-Force, Óscar Yanes, Maria Vinaixa, Daniel López-López, José Carlos Reyes, Joaquín Dopazo, Franz Martín, Benoit R Gauthier, Morten Scheibye-Knudsen, Vivian Capilla-González, Alejandro Martín-Montalvo
Metabolic reprogramming by Acly inhibition using SB-204990 alters glucoregulation and modulates molecular mechanisms associated with aging. Communications biology 6 (1) (2023)
Alejandro Sola-García, María Ángeles Cáliz-Molina, Isabel Espadas, Michael Petr, Concepción Panadero-Morón, Daniel González-Morán, María Eugenia Martín-Vázquez, Álvaro Jesús Narbona-Pérez, Livia López-Noriega, Guillermo Martínez Corrales, Raúl López-Fernández-Sobrino, Lina M Carmona-Marin, Enrique Martínez-Force, Óscar Yanes, Maria Vinaixa, Daniel López-López, José Carlos Reyes, Joaquín Dopazo, Franz Martín, Benoit R Gauthier, Morten Scheibye-Knudsen, Vivian Capilla-González, Alejandro Martín-Montalvo
Metabolic reprogramming by Acly inhibition using SB-204990 alters glucoregulation and modulates molecular mechanisms associated with aging. Communications biology 6 (1) (2023)
Pelin Gundogdu, Inmaculada Álamo-Álvarez, Isabel A Nepomuceno-Chamorro, Joaquín Dopazo, Carlos Loucera
SigPrimedNet: A Signaling-Informed Neural Network for scRNA-seq Annotation of Known and Unknown Cell Types. Biology 12 (4) (2023)
Cankut Çubuk, Carlos Loucera, Maria Peña-Chilet, Joaquín Dopazo
Crosstalk between Metabolite Production and Signaling Activity in Breast Cancer. International journal of molecular sciences 24 (8) (2023)
Alejandro Sola-García, María Ángeles Cáliz-Molina, Isabel Espadas, Michael Petr, Concepción Panadero-Morón, Daniel González-Morán, María Eugenia Martín-Vázquez, Álvaro Jesús Narbona-Pérez, Livia López-Noriega, Guillermo Martínez Corrales, Raúl López-Fernández-Sobrino, Lina M Carmona-Marin, Enrique Martínez-Force, Óscar Yanes, Maria Vinaixa, Daniel López-López, José Carlos Reyes, Joaquín Dopazo, Franz Martín, Benoit R Gauthier, Morten Scheibye-Knudsen, Vivian Capilla-González, Alejandro Martín-Montalvo
Metabolic reprogramming by Acly inhibition using SB-204990 alters glucoregulation and modulates molecular mechanisms associated with aging. Communications biology 6 (1) (2023)
Cankut Çubuk, Carlos Loucera, Maria Peña-Chilet, Joaquín Dopazo
Crosstalk between Metabolite Production and Signaling Activity in Breast Cancer. International journal of molecular sciences 24 (8) (2023)
Pilar Puerto-Camacho, Juan Díaz Martín, Joaquín Olmedo-Pelayo, Alfonso Bolado-Carrancio, Carmen Salguero-Aranda, Carmen Jordán-Pérez, Marina Esteban-Medina, Inmaculada Álamo-Álvarez, Daniel Delgado-Bellido, Laura Lobo-Selma, Joaquín Dopazo, Ana Sastre, Javier Alonso, Thomas G P Grünewald, Carmelo Bernabéu, Adam Byron, Valerie G Brunton, Ana Teresa Amaral, Enrique de Álava
Endoglin and MMP14 Contribute to Ewing Sarcoma Spreading by Modulation of Cell-Matrix Interactions. International journal of molecular sciences 23 (15) (2022)
Pelin Gundogdu, Carlos Loucera, Inmaculada Alamo-Alvarez, Joaquín Dopazo, Isabel Nepomuceno
Integrating pathway knowledge with deep neural networks to reduce the dimensionality in single-cell RNA-seq data. BioData mining 15 (1) (2022)
Frauke Degenhardt, David Ellinghaus, Simonas Juzenas, Jon Lerga-Jaso, Mareike Wendorff, Douglas Maya-Miles, Florian Uellendahl-Werth, Hesham ElAbd, Malte C Rühlemann, Jatin Arora, Onur Özer, Ole Bernt Lenning, Ronny Myhre, May Sissel Vadla, Eike M Wacker, Lars Wienbrandt, Aaron Blandino Ortiz, Adolfo de Salazar, Adolfo Garrido Chercoles, Adriana Palom, Agustín Ruiz, Alba-Estela Garcia-Fernandez, Albert Blanco-Grau, Alberto Mantovani, Alberto Zanella, Aleksander Rygh Holten, Alena Mayer, Alessandra Bandera, Alessandro Cherubini, Alessandro Protti, Alessio Aghemo, Alessio Gerussi, Alfredo Ramirez, Alice Braun, Almut Nebel, Ana Barreira, Ana Lleo, Ana Teles, Anders Benjamin Kildal, Andrea Biondi, Andrea Caballero-Garralda, Andrea Ganna, Andrea Gori, Andreas Glück, Andreas Lind, Anja Tanck, Anke Hinney, Anna Carreras Nolla, Anna Ludovica Fracanzani, Anna Peschuck, Annalisa Cavallero, Anne Ma Dyrhol-Riise, Antonella Ruello, Antonio Julià, Antonio Muscatello, Antonio Pesenti, Antonio Voza, Ariadna Rando-Segura, Aurora Solier, Axel Schmidt, Beatriz Cortes, Beatriz Mateos, Beatriz Nafria-Jimenez, Benedikt Schaefer, Björn Jensen, Carla Bellinghausen, Carlo Maj, Carlos Ferrando, Carmen de la Horra, Carmen Quereda, Carsten Skurk, Charlotte Thibeault, Chiara Scollo, Christian Herr, Christoph D Spinner, Christoph Gassner, Christoph Lange, Cinzia Hu, Cinzia Paccapelo, Clara Lehmann, Claudio Angelini, Claudio Cappadona, Clinton Azuure, null null, Cristiana Bianco, Cristina Cea, Cristina Sancho, Dag Arne Lihaug Hoff, Daniela Galimberti, Daniele Prati, David Haschka, David Jiménez, David Pestaña, David Toapanta, Eduardo Muñiz-Diaz, Elena Azzolini, Elena Sandoval, Eleonora Binatti, Elio Scarpini, Elisa T Helbig, Elisabetta Casalone, Eloisa Urrechaga, Elvezia Maria Paraboschi, Emanuele Pontali, Enric Reverter, Enrique J Calderón, Enrique Navas, Erik Solligård, Ernesto Contro, Eunate Arana-Arri, Fátima Aziz, Federico Garcia, Félix García Sánchez, Ferruccio Ceriotti, Filippo Martinelli-Boneschi, Flora Peyvandi, Florian Kurth, Francesco Blasi, Francesco Malvestiti, Francisco J Medrano, Francisco Mesonero, Francisco Rodriguez-Frias, Frank Hanses, Fredrik Müller, Georg Hemmrich-Stanisak, Giacomo Bellani, Giacomo Grasselli, Gianni Pezzoli, Giorgio Costantino, Giovanni Albano, Giulia Cardamone, Giuseppe Bellelli, Giuseppe Citerio, Giuseppe Foti, Giuseppe Lamorte, Giuseppe Matullo, Guido Baselli, Hayato Kurihara, Holger Neb, Ilaria My, Ingo Kurth, Isabel Hernández, Isabell Pink, Itziar de Rojas, Iván Galván-Femenia, Jan Cato Holter, Jan Egil Afset, Jan Heyckendorf, Jan Kässens, Jan Kristian Damås, Jan Rybniker, Janine Altmüller, Javier Ampuero, Javier Martín, Jeanette Erdmann, Jesus M Banales, Joan Ramon Badia, Joaquín Dopazo, Jochen Schneider, Jonas Bergan, Jordi Barretina, Jörn Walter, Jose Hernández Quero, Josune Goikoetxea, Juan Delgado, Juan M Guerrero, Julia Fazaal, Julia Kraft, Julia Schröder, Kari Risnes, Karina Banasik, Karl Erik Müller, Karoline I Gaede, Koldo Garcia-Etxebarria, Kristian Tonby, Lars Heggelund, Laura Izquierdo-Sanchez, Laura Rachele Bettini, Lauro Sumoy, Leif Erik Sander, Lena J Lippert, Leonardo Terranova, Lindokuhle Nkambule, Lisa Knopp, Lise Tuset Gustad, Lucia Garbarino, Luigi Santoro, Luis Téllez, Luisa Roade, Mahnoosh Ostadreza, Maider Intxausti, Manolis Kogevinas, Mar Riveiro-Barciela, Marc M Berger, Marco Schaefer, Mari E K Niemi, María A Gutiérrez-Stampa, Maria Carrabba, Maria E Figuera Basso, Maria Grazia Valsecchi, María Hernandez-Tejero, Maria J G T Vehreschild, Maria D I Manunta, Marialbert Acosta-Herrera, Mariella D'Angiò, Marina Baldini, Marina Cazzaniga, Marit M Grimsrud, Markus Cornberg, Markus M Nöthen, Marta Marquié, Massimo Castoldi, Mattia Cordioli, Maurizio Cecconi, Mauro D'Amato, Max Augustin, Melissa Tomasi, Mercè Boada, Michael Dreher, Michael J Seilmaier, Michael Joannidis, Michael Wittig, Michela Mazzocco, Michele Ciccarelli, Miguel Rodríguez-Gandía, Monica Bocciolone, Monica Miozzo, Natale Imaz Ayo, Natalia Blay, Natalia Chueca, Nicola Montano, Nicole Braun, Nicole Ludwig, Nikolaus Marx, Nilda Martínez, null null, Oliver A Cornely, Oliver Witzke, Orazio Palmieri, null null, Paola Faverio, Paoletta Preatoni, Paolo Bonfanti, Paolo Omodei, Paolo Tentorio, Pedro Castro, Pedro M Rodrigues, Pedro Pablo España, Per Hoffmann, Philip Rosenstiel, Philipp Schommers, Phillip Suwalski, Raúl de Pablo, Ricard Ferrer, Robert Bals, Roberta Gualtierotti, Rocío Gallego-Durán, Rosa Nieto, Rossana Carpani, Rubén Morilla, Salvatore Badalamenti, Sammra Haider, Sandra Ciesek, Sandra May, Sara Bombace, Sara Marsal, Sara Pigazzini, Sebastian Klein, Serena Pelusi, Sibylle Wilfling, Silvano Bosari, Sonja Volland, Søren Brunak, Soumya Raychaudhuri, Stefan Schreiber, Stefanie Heilmann-Heimbach, Stefano Aliberti, Stephan Ripke, Susanne Gjeruldsen Dudman, Tanja Wesse, Tenghao Zheng, null null, Thomas Bahmer, Thomas Eggermann, Thomas Illig, Thorsten Brenner, Tomas Pumarola, Torsten Feldt, Trine Folseraas, Trinidad Gonzalez Cejudo, Ulf Landmesser, Ulrike Protzer, Ute Hehr, Valeria Rimoldi, Valter Monzani, Vegard Skogen, Verena Keitel, Verena Kopfnagel, Vicente Friaza, Victor Andrade, Victor Moreno, Wolfgang Albrecht, Wolfgang Peter, Wolfgang Poller, Xavier Farre, Xiaoli Yi, Xiaomin Wang, Yascha Khodamoradi, Zehra Karadeniz, Anna Latiano, Siegfried Goerg, Petra Bacher, Philipp Koehler, Florian Tran, Heinz Zoller, Eva C Schulte, Bettina Heidecker, Kerstin U Ludwig, Javier Fernández, Manuel Romero-Gómez, Agustín Albillos, Pietro Invernizzi, Maria Buti, Stefano Duga, Luis Bujanda, Johannes R Hov, Tobias L Lenz, Rosanna Asselta, Rafael de Cid, Luca Valenti, Tom H Karlsen, Mario Cáceres, Andre Franke
Detailed stratified GWAS analysis for severe COVID-19 in four European populations. Human molecular genetics 31 (23) (2022)
Carlos Loucera, Javier Perez-Florido, Carlos S Casimiro-Soriguer, Francisco M Ortuño, Rosario Carmona, Gerrit Bostelmann, Luis Javier Martinez-Gonzalez, Dolores Muñoyerro-Muñiz, Román Villegas, Jesús Rodríguez-Baño, Manuel Romero, Nicola Lorusso, Javier Garcia-León, José María Navarro-Marí, Pedro Camacho-Martinez, Laura Merino-Diaz, Adolfo de Salazar, Laura Viñuela, null The Andalusian Covid-Sequencing Initiative, José Antonio Lepe, Federico Garcia, Joaquín Dopazo
Assessing the Impact of SARS-CoV-2 Lineages and Mutations on Patient Survival. Viruses 14 (9) (2022)
Macarena López-Sánchez, Carlos Loucera, María Peña-Chilet, Joaquín Dopazo
Discovering potential interactions between rare diseases and COVID-19 by combining mechanistic models of viral infection with statistical modeling. Human molecular genetics 31 (12) (2022)
Joaquín Dopazo, Douglas Maya-Miles, Federico Garcia, Nicola Lorusso, Miguel Ángel Calleja, María Jesús Pareja, José López-Miranda, Jesús Rodríguez-Baño, Javier Padillo, Isaac Túnez, Manuel Romero
Implementing Personalized Medicine in COVID-19 in Andalusia: An Opportunity to Transform the Healthcare System. Journal of personalized medicine 11 (6) (2021)
Kinza Rian, Marina Esteban-Medina, Marta R Hidalgo, Cankut Çubuk, Matias M Falco, Carlos Loucera, Devrim Gunyel, Marek Ostaszewski, María Peña-Chilet, Joaquín Dopazo
Mechanistic modeling of the SARS-CoV-2 disease map. BioData mining 14 (1) (2021)
Mariana Gabriela López, Mónica Fass, Juan Gabriel Rivas, José Carbonell-Caballero, Pablo Vera, Andrea Puebla, Raquel Defacio, Joaquín Dopazo, Norma Paniego, Horacio Esteban Hopp, Verónica Viviana Lia
Plastome genomics in South American maize landraces: chloroplast lineages parallel the geographical structuring of nuclear gene pools. Annals of botany 128 (1) (2021)
David Millán-Esteban, Maria Peña-Chilet, Zaida García-Casado, Esperanza Manrique-Silva, Celia Requena, José Bañuls, Jose Antonio Lopez-Guerrero, Aranzazu Rodríguez-Hernández, Víctor Traves, Joaquín Dopazo, Amaya Virós, Rajiv Kumar, Eduardo Nagore
Mutational Characterization of Cutaneous Melanoma Supports Divergent Pathways Model for Melanoma Development. Cancers 13 (20) (2021)
Francisco M Ortuño, Carlos Loucera, Carlos S Casimiro-Soriguer, José Antonio Lepe, Pedro Camacho-Martínez, Laura Merino Diaz, Adolfo de Salazar, Natalia Chueca, Federico Garcia, Javier Perez-Florido, Joaquín Dopazo
Highly accurate whole-genome imputation of SARS-CoV-2 from partial or low-quality sequences. GigaScience 10 (12) (2021)
Martín Garrido-Rodriguez, Daniel López-López, Francisco M Ortuño, Maria Peña-Chilet, Eduardo Muñoz, Marco A Calzado, Joaquín Dopazo
A versatile workflow to integrate RNA-seq genomic and transcriptomic data into mechanistic models of signaling pathways. PLoS computational biology 17 (2) (2021)
Marek Ostaszewski, Anna Niarakis, Alexander Mazein, Inna Kuperstein, Robert D Phair, Aurelio Orta Resendiz, Vidisha Singh, Sara Sadat Aghamiri, Marcio Luis Acencio, Enrico Glaab, Andreas Ruepp, Gisela Fobo, Corinna Montrone, Barbara Brauner, Goar Frishman, Luis Cristóbal Monraz Gómez, Julia Somers, Matti Hoch, Shailendra Gupta, Julia Scheel, Hanna Borlinghaus, Tobias Czauderna, Falk Schreiber, Arnau Montagud, Miguel Ponce-de-Leon, Akira Funahashi, Yusuke Hiki, Noriko F Hiroi, Takahiro G Yamada, Andreas Dräger, Alina Renz, Muhammad Naveez, Zsolt Bocskei, Francesco Messina, Daniela Börnigen, Liam Fergusson, Marta Conti, Marius Rameil, Vanessa Nakonecnij, Jakob Vanhoefer, Leonard Schmiester, Muying Wang, Emily E Ackerman, Jason E Shoemaker, Jeremy D Zucker, Kristie L Oxford, Jeremy Teuton, Ebru Kocakaya, Gökçe Yağmur Summak, Kristina Hanspers, Martina Kutmon, Susan L M Coort, Lars M T Eijssen, Friederike Ehrhart, Devasahayam Arokiar Balaya Rex, Denise N Slenter, Marvin Martens, Nhung Pham, Robin Haw, Bijay Jassal, Lisa Matthews, Marija Orlic-Milacic, Andrea Senff Ribeiro, Karen Rothfels, Veronica Shamovsky, Ralf Stephan, Cristoffer Sevilla, Thawfeek Mohamed Varusai, Jean-Marie Ravel, Rupsha Fraser, Vera Ortseifen, Silvia Marchesi, Piotr Gawron, Ewa Smula, Laurent Heirendt, Venkata P Satagopam, Guanming Wu, Anders Riutta, Martin Golebiewski, Stuart Owen, Carole Goble, Xiaoming Hu, Rupert W Overall, Dieter Maier, Angela Bauch, Benjamin M Gyori, John A Bachman, Carlos Vega, Valentin Grouès, Miguel Vazquez, Pablo Porras, Luana Licata, Marta Iannuccelli, Francesca Sacco, Anastasia Nesterova, Anton Yuryev, Anita de Waard, Dénes Türei, Augustin Luna, Ozgun Babur, Sylvain Soliman, Alberto Valdeolivas, Marina Esteban-Medina, Maria Peña-Chilet, Kinza Rian, Tomas Helikar, Bhanwar Lal Puniya, Dezső Módos, Agatha Treveil, Márton Ölbei, Bertrand de Meulder, Stephane Ballereau, Aurélien J F Dugourd, Aurélien Naldi, Vincent Noël, Laurence Calzone, Chris Sander, Emek Demir, Tamas Korcsmaros, Tom C Freeman, Franck Augé, Jacques S Beckmann, Jan Hasenauer, Olaf Wolkenhauer, Egon L Wilighagen, Alexander R Pico, Chris T A Evelo, Marc E Gillespie, Lincoln D Stein, Henning Hermjakob, Peter D'Eustachio, Julio Saez-Rodriguez, Joaquín Dopazo, Alfonso Valencia, Hiroaki Kitano, Emmanuel Barillot, Charles Auffray, Rudi Balling, Reinhard Schneider, null null
COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms. Molecular systems biology 17 (10) (2021)
Carlos S Casimiro-Soriguer, Javier Perez-Florido, Jose L Fernandez-Rueda, Irene Pedrosa-Corral, Vicente Guillot-Sulay, Nicola Lorusso, Luis Javier Martinez-Gonzalez, José María Navarro-Marí, Joaquín Dopazo, Sara Sanbonmatsu-Gámez
Phylogenetic Analysis of the 2020 West Nile Virus (WNV) Outbreak in Andalusia (Spain). Viruses 13 (5) (2021)
Javier Martín-Broto, Maria Lopez-Alvarez, David S Moura, Rafael Ramos, Paola Collini, Cleofe Romagosa, Silvia Bagué, Salvatore Lorenzo Renne, Marta Barisella, Valerie Velasco, Jean-Michel Coindre, Daniel López-López, Joaquín Dopazo, Marco Gambarotti, Luca Braglia, Domenico Franco Merlo, Emanuela Palmerini, Silvia Stacchiotti, Vittorio L Quagliuolo, Antonio Lopez-Pousa, Giovanni Grignani, Jean Yves Blay, Antonella Brunello, Antonio Gutierrez, Claudia Valverde, Nadia Hindi, Angelo Paolo Dei Tos, Piero Picci, Paolo G Casali, Alessandro Gronchi
Predictive Value of MRP-1 in Localized High-Risk Soft Tissue Sarcomas: A Translational Research Associated to ISG-STS 1001 Randomized Phase III Trial. Molecular cancer therapeutics 20 (12) (2021)
Carlos Loucera, Marina Esteban-Medina, Kinza Rian, Matías M Falco, Joaquín Dopazo, Maria Peña-Chilet
Drug repurposing for COVID-19 using machine learning and mechanistic models of signal transduction circuits related to SARS-CoV-2 infection. Signal transduction and targeted therapy 5 (1) (2020)
Marek Ostaszewski, Alexander Mazein, Marc E Gillespie, Inna Kuperstein, Anna Niarakis, Henning Hermjakob, Alexander R Pico, Egon L Wilighagen, Chris T Evelo, Jan Hasenauer, Falk Schreiber, Andreas Dräger, Emek Demir, Olaf Wolkenhauer, Laura I Furlong, Emmanuel Barillot, Joaquín Dopazo, Aurelio Orta Resendiz, Francesco Messina, Alfonso Valencia, Akira Funahashi, Hiroaki Kitano, Charles Auffray, Rudi Balling, Reinhard Schneider
COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms. Scientific data 7 (1) (2020)
Marek Ostaszewski, Alexander Mazein, Marc E Gillespie, Inna Kuperstein, Anna Niarakis, Henning Hermjakob, Alexander R Pico, Egon L Wilighagen, Chris T Evelo, Jan Hasenauer, Falk Schreiber, Andreas Dräger, Emek Demir, Olaf Wolkenhauer, Laura I Furlong, Emmanuel Barillot, Joaquín Dopazo, Aurelio Orta Resendiz, Francesco Messina, Alfonso Valencia, Akira Funahashi, Hiroaki Kitano, Charles Auffray, Rudi Balling, Reinhard Schneider
Author Correction: COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms. Scientific data 7 (1) (2020)
Daniel Lopez-Lopez, Carlos Loucera, Rosario Carmona, Virginia Aquino, Josefa Salgado, Sara Pasalodos, María Miranda, Ángel Alonso, Joaquín Dopazo
SMN1 copy-number and sequence variant analysis from next-generation sequencing data. Human mutation 41 (12) (2020)
Matías M Falco, María Peña-Chilet, Carlos Loucera, Marta R Hidalgo, Joaquín Dopazo
Mechanistic models of signaling pathways deconvolute the glioblastoma single-cell functional landscape. NAR cancer 2 (2) (2020)
Cankut Çubuk, Fatma E Can, María Peña-Chilet, Joaquín Dopazo
Mechanistic Models of Signaling Pathways Reveal the Drug Action Mechanisms behind Gender-Specific Gene Expression for Cancer Treatments. Cells 9 (7) (2020)
Carlos León, Francisco García-García, Sara Llames, Eva García-Pérez, Marta Carretero, María Del Carmen Arriba, Joaquín Dopazo, Marcela Del Río, María-José Escámez, Lucía Martínez-Santamaría
Transcriptomic Analysis of a Diabetic Skin-Humanized Mouse Model Dissects Molecular Pathways Underlying the Delayed Wound Healing Response. Genes 12 (1) (2020)
David Salgado, Irina M Armean, Michael Baudis, Sergi Beltran, Salvador Capella, Denise Carvalho-Silva, Victoria Dominguez Del Angel, Joaquín Dopazo, Laura I Furlong, Bo Gao, Leyla Jael Castro, Dietlind Gerloff, Ivo Gut, Attila Gyenesei, Nina Habermann, John M Hancock, Marc Hanauer, Eivind Hovig, Lennart F Johansson, Thomas Keane, Jan Korbel, Katharina B Lauer, Steve Laurie, Brane Leskošek, David Lloyd, Tomas Marques-Bonet, Hailiang Mei, Katalin Monostory, Janet Piñero, Krzysztof Poterlowicz, Ana Rath, Pubudu Samarakoon, Ferran Sanz, Gary Saunders, Daoud Sie, Morris A Swertz, Kirill Tsukanov, Alfonso Valencia, Marko Vidak, Cristina Yenyxe González, Bauke Ylstra, Christophe Béroud
The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for research. F1000Research 9 (2020)
Cankut Cubuk, Marta R Hidalgo, Alicia Amadoz, Kinza Rian, Francisco Salavert, Miguel A Pujana, Francesca Mateo, Carmen Herranz, Jose Carbonell-Caballero, Joaquín Dopazo
Differential metabolic activity and discovery of therapeutic targets using summarized metabolic pathway models. NPJ systems biology and applications 5 (2019)
Carlos S Casimiro-Soriguer, Carlos Loucera, Javier Perez Florido, Daniel López-López, Joaquín Dopazo
Antibiotic resistance and metabolic profiles as functional biomarkers that accurately predict the geographic origin of city metagenomics samples. Biology direct 14 (1) (2019)
María Peña-Chilet, Marina Esteban-Medina, Matias M Falco, Kinza Rian, Marta R Hidalgo, Carlos Loucera, Joaquín Dopazo
Using mechanistic models for the clinical interpretation of complex genomic variation. Scientific reports 9 (1) (2019)
Marina Esteban-Medina, María Peña-Chilet, Carlos Loucera, Joaquín Dopazo
Exploring the druggable space around the Fanconi anemia pathway using machine learning and mechanistic models. BMC bioinformatics 20 (1) (2019)
Pedro G Ferreira, Manuel Muñoz-Aguirre, Ferran Reverter, Caio P Sá Godinho, Abel Sousa, Alicia Amadoz, Reza Sodaei, Marta R Hidalgo, Dmitri Pervouchine, Jose Carbonell-Caballero, Ramil Nurtdinov, Alessandra Breschi, Raziel Amador, Patrícia Oliveira, Cankut Cubuk, João Curado, François Aguet, Carla Oliveira, Joaquín Dopazo, Michael Sammeth, Kristin G Ardlie, Roderic Guigó
The effects of death and post-mortem cold ischemia on human tissue transcriptomes. Nature communications 9 (1) (2018)
Mariam Ibáñez, José Carbonell-Caballero, Esperanza Such, Luz García-Alonso, Alessandro Liquori, María López-Pavía, Marta Llop, Carmen Alonso, Eva Barragán, Inés Gómez-Seguí, Alexander Neef, David Hervás, Pau Montesinos, Guillermo Sanz, Miguel Angel Sanz, Joaquín Dopazo, José Cervera
The modular network structure of the mutational landscape of Acute Myeloid Leukemia. PloS one 13 (10) (2018)
Marta R Hidalgo, Alicia Amadoz, Cankut Çubuk, José Carbonell-Caballero, Joaquín Dopazo
Models of cell signaling uncover molecular mechanisms of high-risk neuroblastoma and predict disease outcome. Biology direct 13 (1) (2018)
José M Juanes, Asunción Gallego, Joaquín Tárraga, Felipe J Chaves, Pablo Marín-Garcia, Ignacio Medina, Vicente Arnau, Joaquín Dopazo
VISMapper: ultra-fast exhaustive cartography of viral insertion sites for gene therapy. BMC bioinformatics 18 (1) (2017)
Francisco Salavert, Marta R Hidago, Alicia Amadoz, Cankut Çubuk, Ignacio Medina, Daniel Crespo, Jose Carbonell-Caballero, Joaquín Dopazo
Actionable pathways: interactive discovery of therapeutic targets using signaling pathway models. Nucleic acids research 44 (W1) (2016)
Luz Garcia-Alonso, Jorge Jiménez-Almazán, Jose Carbonell-Caballero, Alicia Vela-Boza, Javier Santoyo-López, Guillermo Antiñolo, Joaquín Dopazo
The role of the interactome in the maintenance of deleterious variability in human populations. Molecular systems biology 10 (2014)

Joaquín Dopazo.css-eqlu8i{font-size:small;padding-left:4px;} (Joaquin Dopazo)

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Joaquín Dopazo (Joaquin Dopazo)