Chris Sander

ResearcherID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 25

Top Venues

ACS synthetic biology

Nature methods

Nature medicine

PloS one

Harvard Medical School

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Harvard Medical School Jan 01 2016

United States

Professor :: Cell Biology

Dana Farber Cancer Institute Jan 01 2016

United States

Director, cBio Center at DFCI :: Biostatistics and Computational Biology

Publications

Ethan M Jones, Yang Su, Chris Sander, Quincey A Justman, Michael Springer, Pamela A Silver
LanTERN: A Fluorescent Sensor That Specifically Responds to Lanthanides. ACS synthetic biology 13 (3) (2024)
Ethan M Jones, Yang Su, Chris Sander, Quincey A Justman, Michael Springer, Pamela A Silver
LanTERN: A Fluorescent Sensor That Specifically Responds to Lanthanides. ACS synthetic biology (2024)
Ethan M Jones, Yang Su, Chris Sander, Quincey A Justman, Michael Springer, Pamela A Silver
LanTERN: A Fluorescent Sensor That Specifically Responds to Lanthanides. ACS synthetic biology 13 (3) (2024)
Stefan Peidli, Tessa D Green, Ciyue Shen, Torsten Gross, Joseph Min, Samuele Garda, Bo Yuan, Linus J Schumacher, Jake P Taylor-King, Debora S Marks, Augustin Luna, Nils Blüthgen, Chris Sander
scPerturb: harmonized single-cell perturbation data. Nature methods 21 (3) (2024)
Ethan M Jones, Yang Su, Chris Sander, Quincey A Justman, Michael Springer, Pamela A Silver
LanTERN: A Fluorescent Sensor That Specifically Responds to Lanthanides. ACS synthetic biology 13 (3) (2024)
Ethan M Jones, Yang Su, Chris Sander, Quincey A Justman, Michael Springer, Pamela A Silver
LanTERN: A Fluorescent Sensor That Specifically Responds to Lanthanides. ACS synthetic biology (2024)
Ethan M Jones, Yang Su, Chris Sander, Quincey A Justman, Michael Springer, Pamela A Silver
LanTERN: A Fluorescent Sensor That Specifically Responds to Lanthanides. ACS synthetic biology 13 (3) (2024)
Stefan Peidli, Tessa D Green, Ciyue Shen, Torsten Gross, Joseph Min, Samuele Garda, Bo Yuan, Linus J Schumacher, Jake P Taylor-King, Debora S Marks, Augustin Luna, Nils Blüthgen, Chris Sander
scPerturb: harmonized single-cell perturbation data. Nature methods 21 (3) (2024)
Stefan Peidli, Tessa D Green, Ciyue Shen, Torsten Gross, Joseph Min, Samuele Garda, Bo Yuan, Linus J Schumacher, Jake P Taylor-King, Debora S Marks, Augustin Luna, Nils Blüthgen, Chris Sander
scPerturb: harmonized single-cell perturbation data. Nature methods (2024)
Ethan M Jones, Yang Su, Chris Sander, Quincey A Justman, Michael Springer, Pamela A Silver
LanTERN: A Fluorescent Sensor That Specifically Responds to Lanthanides. ACS synthetic biology 13 (3) (2024)
Stefan Peidli, Tessa D Green, Ciyue Shen, Torsten Gross, Joseph Min, Samuele Garda, Bo Yuan, Linus J Schumacher, Jake P Taylor-King, Debora S Marks, Augustin Luna, Nils Blüthgen, Chris Sander
scPerturb: harmonized single-cell perturbation data. Nature methods 21 (3) (2024)
Davide Placido, Bo Yuan, Jessica X Hjaltelin, Chunlei Zheng, Amalie Dahl Haue, Piotr J Chmura, Chen Yuan, Jihye Kim, Renato Umeton, Gregory Antell, Alexander Chowdhury, Alexandra Franz, Lauren Brais, Elizabeth Andrews, Debora S Marks, Aviv Regev, Siamack Ayandeh, Mary T Brophy, Nhan V Do, Peter Kraft, Brian M Wolpin, Michael H Rosenthal, Nathanael R Fillmore, Soren Brunak, Chris Sander
A deep learning algorithm to predict risk of pancreatic cancer from disease trajectories. Nature medicine 29 (5) (2023)
Ino De Bruijn, Ritika Kundra, Brooke Mastrogiacomo, Thinh Ngoc Tran, Luke Sikina, Tali Mazor, Xiang Li, Angelica Ochoa, Gaofei Zhao, Bryan Lai, Adam Abeshouse, Diana Baiceanu, Ersin Ciftci, Ugur Dogrusoz, Andrew Dufilie, Ziya Erkoc, Elena G Lara, Zhaoyuan Fu, Benjamin E Gross, Charles D Haynes, Allison P Heath, David M Higgins, Prasanna Jagannathan, Karthik Kalletla, Priti Kumari, James R Lindsay, Aaron Lisman, Bas Leenknegt, Pieter Lukasse, Divya Madala, Ramyasree Madupuri, Pim van Nierop, Oleguer Plantalech, Joyce Quach, Adam C Resnick, Sander Y A Rodenburg, Baby A Satravada, Fedde Schaeffer, Robert Sheridan, Jessica Singh, Rajat Sirohi, Selcuk Onur Sumer, Sjoerd van Hagen, Avery Wang, Manda Wilson, Hongxin Zhang, Kelsey Zhu, Nicole Rusk, Samantha Brown, Jessica A Lavery, Katherine S Panageas, Julia E Rudolph, Michele L LeNoue-Newton, Jeremy L Warner, Xindi Guo, Haley Hunter-Zinck, Thomas V Yu, Shirin Pillai, Chelsea Nichols, Stuart M Gardos, John Philip, Genie Bpc Core Team, Aacr Project Genie Consortium, Kenneth L Kehl, Gregory J Riely, Deborah Schrag, Jocelyn Lee, Michael V Fiandalo, Shawn M Sweeney, Trevor J Pugh, Chris Sander, Ethan Cerami, Jianjiong Gao, Nikolaus Schultz
Analysis and Visualization of Longitudinal Genomic and Clinical Data from the AACR Project GENIE Biopharma Collaborative in cBioPortal. Cancer research (2023)
Davide Placido, Bo Yuan, Jessica X Hjaltelin, Chunlei Zheng, Amalie Dahl Haue, Piotr J Chmura, Chen Yuan, Jihye Kim, Renato Umeton, Gregory Antell, Alexander Chowdhury, Alexandra Franz, Lauren Brais, Elizabeth Andrews, Debora S Marks, Aviv Regev, Siamack Ayandeh, Mary T Brophy, Nhan V Do, Peter Kraft, Brian M Wolpin, Michael H Rosenthal, Nathanael R Fillmore, Soren Brunak, Chris Sander
A deep learning algorithm to predict risk of pancreatic cancer from disease trajectories. Nature medicine (2023)
Ang Cui, Teddy Huang, Shuqiang Li, Aileen Ma, Jorge L Pérez, Chris Sander, Derin B Keskin, Catherine J Wu, Ernest Fraenkel, Nir Hacohen
Dictionary of immune responses to cytokines at single-cell resolution. Nature (2023)
Xubin Li, Elisabeth K Dowling, Gonghong Yan, Zeynep Dereli, Behnaz Bozorgui, Parisa Imanirad, Jacob H Elnaggar, Augustin Luna, David G Menter, Patrick G Pilié, Timothy Anthony Yap, Scott Kopetz, Chris Sander, Anil Korkut
Precision Combination Therapies Based on Recurrent Oncogenic Coalterations. Cancer discovery 12 (6) (2022)
Jeffrey V Wong, Max Franz, Metin Can Siper, Dylan Fong, Funda Durupinar, Christian Dallago, Augustin Luna, John M Giorgi, Igor Rodchenkov, Ozgun Babur, John A Bachman, Benjamin M Gyori, Emek Demir, Gary D Baider, Chris Sander
Author-sourced capture of pathway knowledge in computable form using Biofactoid. eLife 10 (2021)
Alexandra Franz, Fabian Coscia, Ciyue Shen, Lea Charaoui, Matthias Mann, Chris Sander
Molecular response to PARP1 inhibition in ovarian cancer cells as determined by mass spectrometry based proteomics. Journal of ovarian research 14 (1) (2021)
Nathanael R Fillmore, Steven Bell, Ciyue Shen, Vinh Nguyen, Jennifer La, Maureen Dubreuil, Judith Strymish, Mary Brophy, Gautam Mehta, Hao Wu, Judy Lieberman, Nhan V Do, Chris Sander
Disulfiram use is associated with lower risk of COVID-19: A retrospective cohort study. PloS one 16 (10) (2021)
Marek Ostaszewski, Anna Niarakis, Alexander Mazein, Inna Kuperstein, Robert D Phair, Aurelio Orta Resendiz, Vidisha Singh, Sara Sadat Aghamiri, Marcio Luis Acencio, Enrico Glaab, Andreas Ruepp, Gisela Fobo, Corinna Montrone, Barbara Brauner, Goar Frishman, Luis Cristóbal Monraz Gómez, Julia Somers, Matti Hoch, Shailendra Gupta, Julia Scheel, Hanna Borlinghaus, Tobias Czauderna, Falk Schreiber, Arnau Montagud, Miguel Ponce-de-Leon, Akira Funahashi, Yusuke Hiki, Noriko F Hiroi, Takahiro G Yamada, Andreas Dräger, Alina Renz, Muhammad Naveez, Zsolt Bocskei, Francesco Messina, Daniela Börnigen, Liam Fergusson, Marta Conti, Marius Rameil, Vanessa Nakonecnij, Jakob Vanhoefer, Leonard Schmiester, Muying Wang, Emily E Ackerman, Jason E Shoemaker, Jeremy D Zucker, Kristie L Oxford, Jeremy Teuton, Ebru Kocakaya, Gökçe Yağmur Summak, Kristina Hanspers, Martina Kutmon, Susan L M Coort, Lars M T Eijssen, Friederike Ehrhart, Devasahayam Arokiar Balaya Rex, Denise N Slenter, Marvin Martens, Nhung Pham, Robin Haw, Bijay Jassal, Lisa Matthews, Marija Orlic-Milacic, Andrea Senff Ribeiro, Karen Rothfels, Veronica Shamovsky, Ralf Stephan, Cristoffer Sevilla, Thawfeek Mohamed Varusai, Jean-Marie Ravel, Rupsha Fraser, Vera Ortseifen, Silvia Marchesi, Piotr Gawron, Ewa Smula, Laurent Heirendt, Venkata P Satagopam, Guanming Wu, Anders Riutta, Martin Golebiewski, Stuart Owen, Carole Goble, Xiaoming Hu, Rupert W Overall, Dieter Maier, Angela Bauch, Benjamin M Gyori, John A Bachman, Carlos Vega, Valentin Grouès, Miguel Vazquez, Pablo Porras, Luana Licata, Marta Iannuccelli, Francesca Sacco, Anastasia Nesterova, Anton Yuryev, Anita de Waard, Dénes Türei, Augustin Luna, Ozgun Babur, Sylvain Soliman, Alberto Valdeolivas, Marina Esteban-Medina, Maria Peña-Chilet, Kinza Rian, Tomas Helikar, Bhanwar Lal Puniya, Dezső Módos, Agatha Treveil, Márton Ölbei, Bertrand de Meulder, Stephane Ballereau, Aurélien J F Dugourd, Aurélien Naldi, Vincent Noël, Laurence Calzone, Chris Sander, Emek Demir, Tamas Korcsmaros, Tom C Freeman, Franck Augé, Jacques S Beckmann, Jan Hasenauer, Olaf Wolkenhauer, Egon L Wilighagen, Alexander R Pico, Chris T A Evelo, Marc E Gillespie, Lincoln D Stein, Henning Hermjakob, Peter D'Eustachio, Julio Saez-Rodriguez, Joaquín Dopazo, Alfonso Valencia, Hiroaki Kitano, Emmanuel Barillot, Charles Auffray, Rudi Balling, Reinhard Schneider, null null
COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms. Molecular systems biology 17 (10) (2021)
Roc Reguant, Yevgeniy Antipin, Rob Sheridan, Christian Dallago, Drew Diamantoukos, Augustin Luna, Chris Sander, Nicholas Paul Gauthier
AlignmentViewer: Sequence Analysis of Large Protein Families. F1000Research (2020)
Eric Minwei Liu, Augustin Luna, Guanlan Dong, Chris Sander
netboxr: Automated discovery of biological process modules by network analysis in R. PloS one 15 (11) (2020)
Elin Nyman, Richard R Stein, Xiaohong Jing, Weiqing Wang, Benjamin Marks, Ioannis K Zervantonakis, Anil Korkut, Nicholas P Gauthier, Chris Sander
Perturbation biology links temporal protein changes to drug responses in a melanoma cell line. PLoS computational biology 16 (7) (2020)
Roc Reguant, Yevgeniy Antipin, Rob Sheridan, Christian Dallago, Drew Diamantoukos, Augustin Luna, Chris Sander, Nicholas Paul Gauthier
AlignmentViewer: Sequence Analysis of Large Protein Families. F1000Research 9 (2020)
Jeffrey Vedanayagam, Walid K Chatila, Bülent Arman Aksoy, Sonali Majumdar, Anders Jacobsen Skanderup, Emek Demir, Nikolaus Schultz, Chris Sander, Eric C Lai
Cancer-associated mutations in DICER1 RNase IIIa and IIIb domains exert similar effects on miRNA biogenesis. Nature communications 10 (1) (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Chris Sander